Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0042200 | OGI:01071880 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr08:2810799-2811507 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCGAGCATCGCTTGGCAGCGTTGCGTCGTCTACGGACTCAGGCGGCTCGACGACGTCCCCGACAACTCCGACGAGATGGCTTGCGACGTGGCTGGAGCTGGTGACGCCTTGCGGGCACCGAGTAGTGACGCTCCGGCCGGCATTCTCCTCGAGCAACTAGCCGATGAGTTCGAAGAAGATGGTAACGTCGACGAGAGCGAGCGGACGTCAGTGATGTAGTGTAGGGGAGGCTGCGACCGGCAAGGCGACGACGTCCAACGTCTCGGTGACATCACATCGCCAGGTAAAGACGTCGTGGGATAGAGGTTGTGGCCGGCGAGGCAAGGACTTCGCGGCAGAGGTAGATGTGTCGCCGGCGACCGACATCTCTGATGAGAGGGAGCGACGCGATCTCCGGCCGGCAGTGCCTCCGACAGACGGAGAGGACGCTATCTCCAGCATGCCGGGCATCACCAGAGACTCGCCTCGTCGCCGTGTTGTGCATGCATGACGATCTGAACAGAAAAGCAGGCAAAACAAAAGAAAGCTAATAAGCTATACCCATGGCAATGGCTAAGTACATGCTCCGGCGATCGTCTCCTTCTCCGCGCGCCTCCTCGCCGGACGCCGAGGCACTGTGGCCAACGTCACCGGCCGCCGAGCGCACGTGTTCCCGCCGGACGCCGAGATTCTCTGGCCAAAATGGTGCGTGTCTCTCTCTCTGTGA
More
|
||||||||||
| CDS seq | ATGGCGAGCATCGCTTGGCAGCGTTGCGTCGTCTACGGACTCAGGCGGCTCGACGACGTCCCCGACAACTCCGACGAGATGGCTTGCGACGTGGCTGGAGCTGGTGACGCCTTGCGGGCACCGAGTAGTGACGCTCCGGCCGGCATTCTCCTCGAGCAACTAGCCGATGAGTTCGAAGAAGATGGTAACGTCGACGAGAGCGAGCGGACAGGTTGTGGCCGGCGAGGCAAGGACTTCGCGGCAGAGGTAGATGTGTCGCCGGCGACCGACATCTCTGATGAGAGGGAGCGACGCGATCTCCGGCCGGCAGTGCCTCCGACAGACGGAGAGGACGCTATCTCCAGCATGCCGGGCATCACCAGAGACTCGCCTCGTCGCCTACATGCTCCGGCGATCGTCTCCTTCTCCGCGCGCCTCCTCGCCGGACGCCGAGGCACTGTGGCCAACGTCACCGGCCGCCGAGCGCACGTGTTCCCGCCGGACGCCGAGATTCTCTGGCCAAAATGGTGCGTGTCTCTCTCTCTGTGA
More
|
||||||||||
| Protein seq | MASIAWQRCVVYGLRRLDDVPDNSDEMACDVAGAGDALRAPSSDAPAGILLEQLADEFEEDGNVDESERTGCGRRGKDFAAEVDVSPATDISDERERRDLRPAVPPTDGEDAISSMPGITRDSPRRLHAPAIVSFSARLLAGRRGTVANVTGRRAHVFPPDAEILWPKWCVSLSL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0042200 | OsMH63_08T0042200.1 | Chr08 | 2810799 | 2811507 | + | maker | ||
| CDS seq | ATGGCGAGCATCGCTTGGCAGCGTTGCGTCGTCTACGGACTCAGGCGGCTCGACGACGTCCCCGACAACTCCGACGAGATGGCTTGCGACGTGGCTGGAGCTGGTGACGCCTTGCGGGCACCGAGTAGTGACGCTCCGGCCGGCATTCTCCTCGAGCAACTAGCCGATGAGTTCGAAGAAGATGGTAACGTCGACGAGAGCGAGCGGACAGGTTGTGGCCGGCGAGGCAAGGACTTCGCGGCAGAGGTAGATGTGTCGCCGGCGACCGACATCTCTGATGAGAGGGAGCGACGCGATCTCCGGCCGGCAGTGCCTCCGACAGACGGAGAGGACGCTATCTCCAGCATGCCGGGCATCACCAGAGACTCGCCTCGTCGCCTACATGCTCCGGCGATCGTCTCCTTCTCCGCGCGCCTCCTCGCCGGACGCCGAGGCACTGTGGCCAACGTCACCGGCCGCCGAGCGCACGTGTTCCCGCCGGACGCCGAGATTCTCTGGCCAAAATGGTGCGTGTCTCTCTCTCTGTGA
More
|
|||||||
| Protein seq | MASIAWQRCVVYGLRRLDDVPDNSDEMACDVAGAGDALRAPSSDAPAGILLEQLADEFEEDGNVDESERTGCGRRGKDFAAEVDVSPATDISDERERRDLRPAVPPTDGEDAISSMPGITRDSPRRLHAPAIVSFSARLLAGRRGTVANVTGRRAHVFPPDAEILWPKWCVSLSL |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g37680 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0003240 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0003280 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0003220 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0003210 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0003030 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0391600 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0002930 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0080000 | RBH | 0.0386705 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0019910 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0003040 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0005210 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0003080 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0003000 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G005350 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0002840 | SBH | 0.000000 | 0.000000 | 1.910511 |
