Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_08G0022500		OGI:08003880 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr08:1516464-1520423		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		C3H54, OsC3H54
DNA seq		CAGATCGCCGTTTTCCCCTATCAACAAATATATCATGCAAATGACAAAAAATCGGCCGACGTACTCCACTCCATCTCATCAAACCTCTCCGCCTTCTTCTCTCTCGCTCGCACGCACGCAGTCGCGCGCCCCGTTTGAACTGGGCCAAGGCGACGACTAGGCTTCGATCGGCGAGCGAGCCCTCCGCTCGATCCCCCCGCATGCGATGCGATGCGATCGATGCGCGCGCGATACTATCCACCCGATCGAATCGCGCGCTCTCGATCGATCTCGAATTTTATTCCTCCTTTGTTGTTATAAAAGGAGGCCCAGGTTTGTTCTTCGTGTTCCTCCTGTTTCAATTCCATTCTTCCATTGCGGGCGTCTAGTGATCGATCGAGGTAGGCTAGGTTTAGGTTTCATGTCCACCAGTGGTGGTGGTGGGTGGCAATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGTAATGCCAAAATAATCTTCCATTTCTTCTCTATCAATCTTGTTGATTGTTTCTTCTCAATTTGATTGATTGATTGATTTACTGTCTGACGAACAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGTCTGCAATTCGGCATGTATAAACCGCAACTTGTTTGCTTCTTTCCAAATCTTAAATGACATGGCCATTTTCGCTTGTTTGATTGCGTTTGACAGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGTAACCATTACCCTTCTTGGTTCTTGCCAACAGATAGTTCAATTCACAGTAGAGTTTTCAAATGATTAAAAATGGTGTTTCCCATGGACTTGTTAGTACTTCTAGCTGTTACTACTTTTTTGTGTTTGTGACGAGCAAATTAAATTAATTAAAGTTTTTATAAATATTGCAATTTTCACGTGCAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGGTATAATAGCATTTGCATGCACACATCATCACAATGGGCACCGATTAATTCTCAACCTTCATCTTGCTTCAATTTTGTGCAACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGGTCTGTGTGTTGTGTCATTCATTTGTCATTGCCAGAATTATACCTCTAGTTGTTCCATTTCTCCCTGGTTGAAGTTTGTTTAGTGGCTCACGGATTATCTACTACTTGATTATAGTGATAAATTAAATATTTTAAGTAATGAACTTAACGATTAGGTTAATAAGTGCAGTAGAAGAACGGTGTTTCTTACCAAAACATATTTTTTGAAGCGTGGAGATAATATGTTTTAATAGTATAGTGAATAAGCTGAATAGTGCACGGCCAAATATCCTGATGGTTTTGTGCGGCGTTTTTTTTCCTGTGAACAGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGGTACAAACATATTTGCAGTCAATTTCTTGCATATACCCACAATCATATAGGTTGCTACCTGACATTGAGCTAGTTCCTCTTTGTTCATTGGATTGCTTCGTTTGATTTCTAACTGCAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAGGAGGAAAAAAATTACAAAGAGACTTTTGGGCCTTGGGTTCGGAATTCAGGTGCCCTTTTAGGCATTTGATGGTAATTTGGTCCAAGAGTAACATAAGTATACACACACAGGAGGAGACAGCAAAAAGCAACAATATTTTTGTTGTAGATAGAGAAGGAAGGCAGAAGAAAATCTCACTGGTCATAATTAGGCGGCACATCTTTTTCGAAAAAAAATAATTAGGAGGCACATAAACACATGGTGTTCATTTTATACTTTAGAAGAGGACAGAAACAACAGCTTACAAAAGAATCTCACATGGTGCAGTAGCTAGCTTGCAAGAGGTAAGGACAGTTACAAAAGAATTACAATGGTGGAAACTTGAGATATAGATGTGCAGTTTGACTATAATTAAGGAATAGGGGACAATGTGATATGCTAATTATACTGTCCTACAATAAGGCGTGTTATTATTTACATATTTAGTGTTATCTTCTTTTTTTTAGGGTATAATGGCCTACTGGCCTTTACATTTACAAGGGTGAAAAAAAAAAGCAGAACCTTTGCTGATATTCCTATTGACAAGATGAGCAGAGCGTGCTCATTTGTACTTCGCATCAGTAATGGAGAAAATTGGCTTCGATGTTTATTTCCTGCTTTCTGTAAATTATTTGTCTTGTTTTGAGTGCATCATTAGATCGCATTTTCACCAAACCAAGTACTCCCCCACGGTGCATCAGATTTTGCTACGATTCTTGGGTTTTTTCGGGTTGATAGTGGAAAAGTCAACAGATAAGTCACCCTTCGCTTAATTTCTAAGATTCGCTTGCATAACTATGGC More
CDS seq		ATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAG More
Protein seq		MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVIDASAEGPYPLRGGQHVLDDNNFGGGYYYPAGEDAFPNGGGGGGGGGGSPARARRSNGLSTRRPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKREMLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTII
Function		Zinc finger CCCH domain-containing protein 54 [UniProtKB/Swiss-Prot:Q6ZK57]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_08G0022500	OsMH63_08T0022500-mRNA-1	Chr08	1516464	1520423	+	maker
CDS seq	ATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAG More
Protein seq	MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVIDASAEGPYPLRGGQHVLDDNNFGGGYYYPAGEDAFPNGGGGGGGGGGSPARARRSNGLSTRRPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKREMLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTII More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_08G0022500	OsMH63_08T0022500-mRNA-2	Chr08	1516464	1520423	+	maker
CDS seq	ATGGAGGTGCCGGAGTTAGTGAAGCTGGCGTTCGCGAGGGTGCAGAGGGTGGAGCCGGAGCATGTCGGCAAGATATTCGGCGTAATGCTGCTGAGGGAGCCCGACGAGGACGAGTTGGTGCAGCTCGCATATGGTCCCGAGGCCACGCTCCTCGCCAAGATCGAGGATACTAAGGCCGCGCTCACCGTCATCTATGCCCGCTGCTCCGCCGCCGCCGCGCACGGACCTCCCGGTGGCGGCGGCGTCGGCGTCGGCGGCGGCGGAGGCTATCACCAGCAGCCGCAGCAGCTCTTCTCCCGCCCCCCGGTACCTGCTTGCGGCGGCGTTCGCCATCACTACTCTCCCGCCGCCGCCGCCGCGGCTGCCTTTGGATACCAGGTCCAGTCGCCGCAGTACTGGCCGGACTCGCCGCCGGCGCCACCGACTAAGGCGGCGCAGCAGGAATTCGCGCCTCCCGGGCTCGTCATCGACGCCTCCGCGGAGGGCCCGTACCCGCTGCGCGGCGGCCAACACGTCCTCGACGACAACAACTTTGGCGGCGGGTACTACTACCCGGCCGGCGAGGACGCCTTCCCCAATGGCGGGGGTGGCGGCGGTGGCGGCGGGGGGTCGCCGGCGAGGGCGCGGCGTTCGAACGGGCTGTCCACTCGACGTCCCTGCCACTACTTCTCCAAAGGCATCTGCAAGAACGGCCAGAACTGCCACTACTCGCACCACCAGGTGTACCAGGACGCGCTCGCCGGCGCCGCCATCAACGGCGACGTGTACAACCACCAGCCGGGCGGCGTGACACCGGGCTCGCTCGAGACGCTGGAGATGGAGATCACCGAGCTGCTCAACTCGCGGCGCGGGCAGCCGGTGTCCATCGCCTCGCTGCCGACGCTCTACGGCGAGAAGTACGGCAAGGGACTCCAAGCCGACGGCTACCTCACCGAGAGCCAGCGCCATGGCAAGGCCGGATACAGCCTCACCAGGCTGCTCTCTCGCCTCAACAAGATACGGGTCATCGAAAGGCCGCACGGGCAGCATTCGGTGGTTCTCGCGGAGGACGCTGCCAAGTACATGGATTTCAGAGGTGGCGGCGGCGGTGGTGGCGGCGACACGGGCTCAGTTCCGGCGAGCTCGCACCAGATATACCTCACCTTCCCAGCCGAGAGTACCTTCGCCGAGGACGACGTCGCCAACTACTTCGGGCAGTACGGGCCGGTGCGCGACGTGAGGATCCCCTGCCAAGAGCGGCGCATGTTCGGGTTCGTCAGCTTCCAGAGCCCGGAGACGGTGAGCACCATCCTGATGCGGCGCAACCCGCATTTCATCTGCGGATCGCGGGTTCTCGTCAAGCCCTACAGGGAGAAATCCAAATGCGTCGACAGGACGTGCGTGGACAACATCAAATCGATGGTTCCCTACTGTCCTCCACGCTTCTTTGAGTTTGATCAAGAGCTCTACACAGCAGAGTATGATGCTTCGAGGTTGATGAGGAAGCAGTTGGCAGAGAAGCGCGAGATGCTCTTGGAGATGGAGAGGCGGCGCGCCACAGTTCGGAGGCTTGAATCCATGCCGCCACAGTTTGCATACTTCGATTGCAGCATTGAGGACGCCAGTCCCCTCCATTCCCTCCAGGATGATTCGAAACAACTCGACCTTATGAATCCATCCCTTGCATCCCCTGATCCACTGGAGATCGTTTCAAACAGCCAAGCTCCTCCTACACAGGCAGGCAACATTTATGATGACCATGAGAGTAACCAGATTGAACTGCTGCCTGAGAGTCCATTCGCCGCATCAGCGCCTGCTGGAAACAGCATATCCACAATCATATAG More
Protein seq	MEVPELVKLAFARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAALTVIYARCSAAAAHGPPGGGGVGVGGGGGYHQQPQQLFSRPPVPACGGVRHHYSPAAAAAAAFGYQVQSPQYWPDSPPAPPTKAAQQEFAPPGLVIDASAEGPYPLRGGQHVLDDNNFGGGYYYPAGEDAFPNGGGGGGGGGGSPARARRSNGLSTRRPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDRTCVDNIKSMVPYCPPRFFEFDQELYTAEYDASRLMRKQLAEKREMLLEMERRRATVRRLESMPPQFAYFDCSIEDASPLHSLQDDSKQLDLMNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTII More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	41.4711515	2.133016	0.329797

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_08g0126700	RBH	2.112302	1.550933	1.238468
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os08g03310	RBH	1.539100	0.933668	0.269485
Nipponbare \| IRGSP 1.0 \| RAP-db	Os08g0126700	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_08g0001820	RBH	5.155721	0.963683	6.952759
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_08g0001830	RBH	0.855074	0.000000	2.659986
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_08g0001860	RBH	11.075414	0.0	4.109533
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_08g0001820	RBH	3.122030	0.021272	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_08g0001680	RBH	28.205166	0.0	24.346884
Minghui 63 \| MH63RS3 \| HZAU	NA	NA	NA	NA	NA
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_08g0001570	RBH	8.685742	0.000000	0.672687
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_08G0024200	RBH	28.2027335	1.153771	1.326367
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_08g0001760	RBH	0.349986	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_08g0001740	RBH	1.160684	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_08g0001660	RBH	51.428249	3.087374	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_08g0001750	RBH	10.798762	0.0	2.120465
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_08g0001680	RBH	4.516765	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_08G001790	RBH	6.831315	0.0	1.666963
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_08g0001660	RBH	26.865145	1.385086	8.038581

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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