Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsMH63_07G0447300 | OGI:07074680 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:28490548-28496338 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | AAAATATGCAGGCAGAAACTACTTTGGAAGGAACTTCTACAGTAAGATACATTCTCAGCATCTAGAATGCTGAGTAAGGCCACACTAGACAGGCCAACTTACAATTAGTCCTAGGCCAGAGACCTGGAGGAAACAATTACAAGTAGAAACTACTAAATCTTATTACAGTAGCTCACAATCCAAGATTGCCACAACTAGGTTTATGAAGCTGCAAGTTTTTATTCACTCTTGGCCCGCACTCGTTATAGCAAAGCTGACCAAGTCACCCTCACTAAGATTAATGCAAAAGCAGTCTTTATTTCCTGAGTATCATGCCCATGGATTTTCGGCTTGAAGGAACAGCAATGGTCCAAACTGGATGACAGTGCGCCTACTTTGAAATTTAACTCTATCGAATAGTTCATGCTTACAGCAACCACCGACCTCTTTAACCCACGTGGTTCAGTGATGGTACCATTAAATAGCCGGATTTCCTTATCCAAGCCACTTGTTAAACAACCGAGCGACAAATCGAAACTGCTTTGCACTTCTGATATGACAACCTCCACAGTTGCCTCAGCTGCCCAATGAAGACGTGATAAAGTTATGTCAACTGCACCGTAATCGCCAGGGATACGAAGTGCATATGACTTATCCCATAGGCCTGCAGGGCCTATCAATGATGCACCATCGATCAGCTGTAGGTCATCTTTTTCTTGTCCGCCTGTCTTGATCCTCATGTCATATTCGATTAGAGCATAGTCCATCATGTCTATCCCACGCTTAGGGCCCACCATGTTGATGAGTGAACCCTGCAAAATTATTGTATTTAGCTGCTTTCCATATAAAAGTAGGAAATATCTAAAGCTAGATGCTTCCCTTATATTGTAAAAACGTTTACGTAAAAGGAACATTTTACAACTGATAACCAAGACCTAATGTATCAAACAATATGGTTACAAAATGCATAATAAATATAGAAAGGGGATATTGGACCGTGTTGTTCATTTTATTTGTTTCAAATCCCAAATAAACATAAGCCTGTGTAAAATGAAACAGAAGACTCATCTAGTGATGGGATCATTGATGCTATGCATCTTCATATGCCTATGAACAAAAGAAAATTAATTTGTAGTGTACTAAGCCGCAACCAAGTGTCCAAAATTATTCAGCATGAGACTTTTTTTGGAAATACATGTTATTTTCTAAGTTTCATAATTTAAATATGTTGTCATAGTAAATCATCATTTCATAATATAGAGTACTCCCTCTGTCCATCAATATAAGGTGCATTTTGGAAGAAGGCACTCTTCAAAGGTAGATTTTGACCTTTGATTTCTCTATCAATATATTGCCAAATGCTATAAAATTAACATCTTAAAAGTAGTTCGAGTATTGGCTGTTATCGGACGATCTCAGATTAAAGGTGATAATTTTATTATGGTAAATGGGTACATAGAACATTTACATCCAACTATAAGTCCTTCTAGGGAGAGGCCTTCTGGTAATGGGTTCCTCCATTGGGTTAGTTGCTGAAAGTAAACATCGATGGTTCTCTTTATGCTCAAAGAAACAGAGGTGGATGGGGTGTAATTGTGAGGGATTGCCAAGGCCAACCTATTGTGGCAGCAACAGGGTAGTCCAATGAATTTACGAGATGTACTACAAGCAGAAGCAATGGCTTGCATTGAAGTTCTCAATTTGGGAATCTGTTTTGGTACAAGGCATGCCACTGTAGAAACTGACTCTAAACAACTAGTTCAAGCAATTAATGATGATGGATTAGATAATGGTATTGACACTGCTGTTATTCGTGAAGTTCAGAACTTGTTGTCGTTGGAGTTTGATGTAATAAAGGTTGTGTGTTAACATTTAGATAATGGTTCTGTGCTCCTTTCGATTCCTCTACACCAGTAGTTTGGTGCTTATCTGTAACCTGGTGAACAGCAATTTAGCTGTTCCTTTGGAGTAATGGAAGTTTCCTTTCAAGCAATTCGAGCATCAATAATTATACTATTTTTGCCAAAAGCCATGAAGTATGACTTTTCCAAATCAAAATACATTTTGGATGAAGGTAGTGGTGGCTTTTACAATCCAAAGTATTGTACTATTATTCTGCTACTTTTGAACAGAATAATCATATTTAGTAGTTTTTTTGCAGCTAAGATAAAATATTATGTGGAAGCTATAAAAAAATATATGTCTGTGGAACAACTTTAATGATGTGAATGAGACTCCAGTTGTAGTATGCCATCAAGAATATGTAGTGATCCAATCTCATATATTTTATGCATGTGAGAAATTTAGCCTTATATTATGAAATGAATAAAGTAATTCAAAATAAGAAATAAGTCTACTTAACCCCATCAACTATGGAGGTTTGTCTACTTAACCCTCATAGGTACAAAATTGGGTATTTGGCCCCCCAAAAGTATTCGATGCTATCTAGATCTACCACCGAAATGATTCTCTTGGGCAGTTTCGGTGGTGGTTTTGCCCATGTGGCAGCATCAACATAACAAGCCATATGCGCGAAACCAACACCAAAACTGCCCCAAGGTGGTTTTATACTTGAGGGGGATAAGCAGACAAACCACAATACTAAGGGATGTTCGGTAGACTTATTCCTTGAAATAATTGTAGATTAGTCTGGACTGGATGTGTACCTGCTCCACAATGATGGGATCATCCCTGCTAACATTGACGATATAATTAAGCAATGGATCCAGATCATCCCGCACTGCTATGTATCCGTACAACTCTACTAAGCCACCGTCCACTCGAAGTTTAGCCAACTTTATTGATAAAATTTGCAGCATGTTACAAGAATAATGTGTCCTGCAAGTTCCATCGCGATCGCAAATGATACAATCTGTGGCATTTGAATACCTCATTGCCTCCAACCGAGCTTCATAAAAAGTAAAGTAATGATGTAAGTTTCTAACTGGAAATTAATGCAGTGAACAAATACTTGCCATTTGAAAAGTATATGCATGTGCTATTTGATGATTATATGGCCTTATTGGAAAATTTTCCCTTTTATCTACAAAGTATAAACAGCATATGTTCTTTTTACTAAGAATTGTGCTCCCCACCTGAAAAATTCTTCTTCAGGAACACCAAAAAGAAAGCATTGCCTCAAAATGCATATCAGTTGTTTCCAATGAAAGCATTGACCACGGGGCTAACGAGGATTGAAGGGGATATCGCCACAAAGTATGGAATATTTCGTCCCAAAGCATACTATACACAATACATGCCATCTATTTAGATGAGATCAGTGTGCTAGGAGTTGACTCGGATGATTTCCAGTCCATTGGTGCCACAACTCAATACCCTCTAGTATCACTGCAGAAGAGTAAGGGAGGAGAGCAACCTCTATCGTTTTAATGGGATAATACTCTTAGTATCACCTACAAGCATATGGAAATAGGATTTTTCCAGATTAGAGATTCCAATGAATGTTATAAGACTAATGGGCCTCCTGGAAACCCGCCTTTCTATGGCAAAAGGGCAGGTGGACCCAGAAGGTCATTGAAAAGGAAACCTCATGAGGTGCAGGGAAAATCAACATGTCCAACCATTAAGTCATAACACATTGCAGCTACTGTAACAAACCAAACCACAAAGATGTAAGTTCAGAAAAGCCGGTATTAAGACTACAAAGAGGAAAAGGGAAGCTACAAAGATGCCTGAAGACCAACAAGGTAAGTAATCAATAAAAAAGAACTCAAGGGCAGACTACCTCTACAGCAAACCAGGTATAACCTTTACCAGCCTTCTAGACTATAGAACTTCACTTCTAAATGCCTTTCCCCCTTGTCACGTGGATAAGGCTTTCCCCATGTCCATTCATCACACAAAACTGACAACCAAACAGTTACTCAGAGCAGCAGATAAGCACAACTTCCACATTTCACTTTCATATCCAACATGAGGTCAGAAGCAGTTGATGTTCCACACACATCAGCAAGCAGGAAGGTTAGGGTGGACAATTACCAAGACAAATTGACATCAATCAGTGAGTCAATGTCCCCTTGTGCAGGAAACACTTATGTGCATAAGCAAAAGAACACTTATAATTTTGCTAGATAAGTGGTATACATTATGGAAAATGACAACCCAATCCCCATGTTAAACAGGGGCATCAGAATGTTTGGTTGGCCCCTTTAACTCCTAGAAGTCCTTTAGGTTATATATAGTATCTGAACTGCCTGAGGACTAAATTGTGTTATTGCTTGTATGTTACTGTCTGCAGGCTTGAAAAAAGAACTTGTATTGCTGGCAGTTCGTGGCTGCACGCATGGAGACTTTAAACCTAATAATGGTAACTACAACAGTGTGGATGCCCATATTTAGATCTTCATTTGCACTCATAACTTTCATTTTCCTGTGTATTGTGCAGTTCAAATACATGCTCAAAATTTGTGTGATATGGTTTGATATGGAAGCAAAATTCAGGGAGAAAGCACTGTATTTGCATATGGCTGTCAGTGCTGCAGAGCACCTCAATATACAATGATCTCTAGGATCACAATAAAATATGTACAGCTAATAGGATATGGAAAGAGATACACAACGTTTAAGTAAACAAATCATCTCTATATAATAATAGTAATAATAATATAAAAAATAGAAATAGAAAAAAAAAGAGATATATAGCTTACTCTCATTACGGCCTGCAATATGATAATCCCTTTTCCACCATGTATCCATGTCCTTGTATATAGAACCATCATGGTGTCTACTTTCTGGAAGTGTATTGTCCACAACAAATTTTTCATCATCAATGGCTTCTGTGTCATCACTGATAACGATTCCTCCCATGTGCTCCTCCGTTTTGCTCCTTTGACCTTCATCACCACACCGATCGTTCTTCATAATTTGCCCCAATATATCATAATTGACACATATAACCTCTGAGACGGTCACATCTTTATCAATTTTCTCATCTCCAGCTATAACCTCCGAGATTGTGCCCTTGGTGTCAATGCTTTTCATGCCTTGGGTGATCACAGAATCCTTCTTGTCCTGGGATGGAATAATAACGTTGGCAGAGGAGATGTGTGATCGTCTGTATGGTTTACCAAATTCATTGCCTTTCACTCGACTGATGGTGGTCATGTACCGAGGTCCCCAAGGAGATCTATCATTTACGAGAACATAAACAAAACCAATATCAACATCTGAAATAAATAAGATGGCATAAGTAAGGATTGAAATCGTAATTTAACATGATCTAAGCCTGAAATCCATAACAGATTTCTATTTTTTTTATCGGTCTCTTTTTTGTCTGTTCCTGTTGGATTATTATATAGCTAAATGTAACTTATTTTTTCCCATCTGCCTTCTGAGAACCAACAGAGGTTGCAAGGGTAAATCAAAACCAACCCCTCCCCCCTTCCCACACACACAAATTTTGCCTTAAAAAAATCTTGAGAAGGGCATCCGTCACTAGCAAATAAATGCGCAAACCTTAGCATCAGGACAAGAAAACACACCGGAAAACAGGTGGATTGGGAGACGCCATGGGTGGAGAAACTCGTCGTGTAGGCACTGGTGGTGGCAATAACCAGTGAGGCGCTGCACTTGACATGGAAGTGAAATGAGATCGCGAGGGAGACGAGAGGCGGTGCATCGGGGCAAGAGAGCGCGGAATAGGAGCGGAGGATTCGCATCTGGGCGAGCCGGCCGGCGGCGAGACGCTCGACGCTCGTCGCCGGCGAGCGCGCTGCCCTATCGGAATATGCTCGAGGAAAGGCCTCTTGAGAGATCGACCTAAAGGGAAGGGAGGCTGGTGCATTCGGCCCAT
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CDS seq | ATGGGCCGAATGCACCAGCCTCCCTTCCCTTTAGGTCGATCTCTCAAGAGGCCTTTCCTCGAGCATATTCCGATAGGGCAGCGCGCTCGCCGGCGACGAGCGTCGAGCGTCTCGCCGCCGGCCGGCTCGCCCAGATGCGAATCCTCCGCTCCTATTCCGCGCTCTCTTGCCCCGATGCACCGCCTCTCGTCTCCCTCGCGATCTCATTTCACTTCCATGTCAAGTGCAGCGCCTCACTGGTTATTGCCACCACCAGTGCCTACACGACGAGTTTCTCCACCCATGGCGTCTCCCAATCCACCTGTTTTCCGATCTCCTTGGGGACCTCGGTACATGACCACCATCAGTCGAGTGAAAGGCAATGAATTTGGTAAACCATACAGACGATCACACATCTCCTCTGCCAACGTTATTATTCCATCCCAGGACAAGAAGGATTCTGTGATCACCCAAGGCATGAAAAGCATTGACACCAAGGGCACAATCTCGGAGGTTATAGCTGGAGATGAGAAAATTGATAAAGATGTGACCGTCTCAGAGGTTATATGTGTCAATTATGATATATTGGGGCAAATTATGAAGAACGATCGGTGTGGTGATGAAGGTCAAAGGAGCAAAACGGAGGAGCACATGGGAGGAATCGTTATCAGTGATGACACAGAAGCCATTGATGATGAAAAATTTGTTGTGGACAATACACTTCCAGAAAGTAGACACCATGATGGTTCTATATACAAGGACATGGATACATGGTGGAAAAGGGATTATCATATTGCAGGCCGTAATGAGACTCGGTTGGAGGCAATGAGGTATTCAAATGCCACAGATTGTATCATTTGCGATCGCGATGGAACTTGCAGGACACATTATTCTTGTAACATGCTGCAAATTTTATCAATAAAGTTGGCTAAACTTCGAGTGGACGGTGGCTTAGTAGAGTTGTACGGATACATAGCAGTGCGGGATGATCTGGATCCATTGCTTAATTATATCGTCAATGTTAGCAGGGATGATCCCATCATTGTGGAGCAGGGTTCACTCATCAACATGGTGGGCCCTAAGCGTGGGATAGACATGATGGACTATGCTCTAATCGAATATGACATGAGGATCAAGACAGGCGGACAAGAAAAAGATGACCTACAGCTGATCGATGGTGCATCATTGATAGGCCCTGCAGGCCTATGGGATAAGTCATATGCACTTCGTATCCCTGGCGATTACGGTGCAGTTGACATAACTTTATCACGTCTTCATTGGGCAGCTGAGGCAACTGTGGAGGTTGTCATATCAGAAGTGCAAAGCAGTTTCGATTTGTCGCTCGGTTGTTTAACAAGTGGCTTGGATAAGGAAATCCGGCTATTTAATGGTACCATCACTGAACCACGTGGGTTAAAGAGGTCGGTGGTTGCTGTAAGCATGAACTATTCGATAGAGTTAAATTTCAAAGTAGGCGCACTGTCATCCAGTTTGGACCATTGCTGTTCCTTCAAGCCGAAAATCCATGGGCATGATACTCAGGAAATAAAGACTGCTTTTGCATTAATCTTAGTGAGGGTGACTTGGTCAGCTTTGCTATAA
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Protein seq | MGRMHQPPFPLGRSLKRPFLEHIPIGQRARRRRASSVSPPAGSPRCESSAPIPRSLAPMHRLSSPSRSHFTSMSSAAPHWLLPPPVPTRRVSPPMASPNPPVFRSPWGPRYMTTISRVKGNEFGKPYRRSHISSANVIIPSQDKKDSVITQGMKSIDTKGTISEVIAGDEKIDKDVTVSEVICVNYDILGQIMKNDRCGDEGQRSKTEEHMGGIVISDDTEAIDDEKFVVDNTLPESRHHDGSIYKDMDTWWKRDYHIAGRNETRLEAMRYSNATDCIICDRDGTCRTHYSCNMLQILSIKLAKLRVDGGLVELYGYIAVRDDLDPLLNYIVNVSRDDPIIVEQGSLINMVGPKRGIDMMDYALIEYDMRIKTGGQEKDDLQLIDGASLIGPAGLWDKSYALRIPGDYGAVDITLSRLHWAAEATVEVVISEVQSSFDLSLGCLTSGLDKEIRLFNGTITEPRGLKRSVVAVSMNYSIELNFKVGALSSSLDHCCSFKPKIHGHDTQEIKTAFALILVRVTWSALL |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_07G0447300 | OsMH63_07T0447300-mRNA-1 | Chr07 | 28490548 | 28496338 | - | maker | ||
CDS seq | ATGGGCCGAATGCACCAGCCTCCCTTCCCTTTAGGTCGATCTCTCAAGAGGCCTTTCCTCGAGCATATTCCGATAGGGCAGCGCGCTCGCCGGCGACGAGCGTCGAGCGTCTCGCCGCCGGCCGGCTCGCCCAGATGCGAATCCTCCGCTCCTATTCCGCGCTCTCTTGCCCCGATGCACCGCCTCTCGTCTCCCTCGCGATCTCATTTCACTTCCATGTCAAGTGCAGCGCCTCACTGGTTATTGCCACCACCAGTGCCTACACGACGAGTTTCTCCACCCATGGCGTCTCCCAATCCACCTGTTTTCCGATCTCCTTGGGGACCTCGGTACATGACCACCATCAGTCGAGTGAAAGGCAATGAATTTGGTAAACCATACAGACGATCACACATCTCCTCTGCCAACGTTATTATTCCATCCCAGGACAAGAAGGATTCTGTGATCACCCAAGGCATGAAAAGCATTGACACCAAGGGCACAATCTCGGAGGTTATAGCTGGAGATGAGAAAATTGATAAAGATGTGACCGTCTCAGAGGTTATATGTGTCAATTATGATATATTGGGGCAAATTATGAAGAACGATCGGTGTGGTGATGAAGGTCAAAGGAGCAAAACGGAGGAGCACATGGGAGGAATCGTTATCAGTGATGACACAGAAGCCATTGATGATGAAAAATTTGTTGTGGACAATACACTTCCAGAAAGTAGACACCATGATGGTTCTATATACAAGGACATGGATACATGGTGGAAAAGGGATTATCATATTGCAGGCCGTAATGAGACTCGGTTGGAGGCAATGAGGTATTCAAATGCCACAGATTGTATCATTTGCGATCGCGATGGAACTTGCAGGACACATTATTCTTGTAACATGCTGCAAATTTTATCAATAAAGTTGGCTAAACTTCGAGTGGACGGTGGCTTAGTAGAGTTGTACGGATACATAGCAGTGCGGGATGATCTGGATCCATTGCTTAATTATATCGTCAATGTTAGCAGGGATGATCCCATCATTGTGGAGCAGGGTTCACTCATCAACATGGTGGGCCCTAAGCGTGGGATAGACATGATGGACTATGCTCTAATCGAATATGACATGAGGATCAAGACAGGCGGACAAGAAAAAGATGACCTACAGCTGATCGATGGTGCATCATTGATAGGCCCTGCAGGCCTATGGGATAAGTCATATGCACTTCGTATCCCTGGCGATTACGGTGCAGTTGACATAACTTTATCACGTCTTCATTGGGCAGCTGAGGCAACTGTGGAGGTTGTCATATCAGAAGTGCAAAGCAGTTTCGATTTGTCGCTCGGTTGTTTAACAAGTGGCTTGGATAAGGAAATCCGGCTATTTAATGGTACCATCACTGAACCACGTGGGTTAAAGAGGTCGGTGGTTGCTGTAAGCATGAACTATTCGATAGAGTTAAATTTCAAAGTAGGCGCACTGTCATCCAGTTTGGACCATTGCTGTTCCTTCAAGCCGAAAATCCATGGGCATGATACTCAGGAAATAAAGACTGCTTTTGCATTAATCTTAGTGAGGGTGACTTGGTCAGCTTTGCTATAA
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Protein seq | MGRMHQPPFPLGRSLKRPFLEHIPIGQRARRRRASSVSPPAGSPRCESSAPIPRSLAPMHRLSSPSRSHFTSMSSAAPHWLLPPPVPTRRVSPPMASPNPPVFRSPWGPRYMTTISRVKGNEFGKPYRRSHISSANVIIPSQDKKDSVITQGMKSIDTKGTISEVIAGDEKIDKDVTVSEVICVNYDILGQIMKNDRCGDEGQRSKTEEHMGGIVISDDTEAIDDEKFVVDNTLPESRHHDGSIYKDMDTWWKRDYHIAGRNETRLEAMRYSNATDCIICDRDGTCRTHYSCNMLQILSIKLAKLRVDGGLVELYGYIAVRDDLDPLLNYIVNVSRDDPIIVEQGSLINMVGPKRGIDMMDYALIEYDMRIKTGGQEKDDLQLIDGASLIGPAGLWDKSYALRIPGDYGAVDITLSRLHWAAEATVEVVISEVQSSFDLSLGCLTSGLDKEIRLFNGTITEPRGLKRSVVAVSMNYSIELNFKVGALSSSLDHCCSFKPKIHGHDTQEIKTAFALILVRVTWSALL
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 2.8681365 | 1.694624 | 7.9679675 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0649600 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g45520 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os07g0649600 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025730 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025780 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025610 | RBH | 0.0 | 0.0 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0025560 | RBH | 0.105077 | 0.127244 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0025810 | RBH | 2.488831 | 1.902485 | 15.610193 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0444400 | SBH | 22.604575 | 14.355679 | 15.064616 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0026290 | RBH | 0.360202 | 0.089959 | 1.358870 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0459500 | RBH | 3.8043625 | 0.892949 | 19.743468 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0025580 | RBH | 0.000000 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0025780 | RBH | 0.000000 | 0.000000 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0025640 | RBH | 0.000000 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0025840 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0025590 | RBH | 0.168699 | 0.934633 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G025460 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0025510 | RBH | 0.530420 | 0.0 | 6.405299 |