Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_07G0376900 OGI:07064470 | 16/16 Minghui 63 | MH63RS3 | HZAU Chr07:24379560-24383086
Gene Symbol -
DNA seq

TCAATAAGCAACCCAATTAGCAATCTCCTCCAAACCCATCCCCACATCATTGACGTTGTTAAGATCGATGCCCTCCCTTGCCTCTATGTTCCCGTTCAAGTTCTTCCTCACCGTTGCCATCTCCTTGTTGGACCTGGCCATATAGTGCTCGGGGGGAACCGGTCGTGAGCAAAGGTGGCTAAGCAAAGGGTTGTCGCAGGGAAGCAGCCGGGAGGCAGCAACGTCAGATGAAACTTGACCTTCGAGGTGGAGTGACATACTGACATGTGCAAATGTGTGGTGTTGGACGTCGGGTTTGCTTCGTCATGCCACAAAGTAGAGTTGACGCACGACTGCATAAGGATGATGAAGCTAACGACAGCTACAATGGAGATGTCAAGACGCTGTAACTGGCGAATGAGATCTCTACAACCTGGTGTGGAAGCGGGAGGAAGAAAGCCATATTGGTATGCTTTGCAAATCTTGATGTTTCAACAAATGGACTACAATTTTTCACGGGCAATAGTGAAATGTTATATCTTGAATTTGACTGTGTTTCACGTTTTCAGATTTGTTATTTTTGATGCTTCGATAGTTGGCACTTAATGTTCCAGAAAATGTTTCACCTTGAATTTAACAGGGTTTCGCCTTTTTCTACTTATTATTGATGTTGCACTCTACTTATCAACATATTTTTTACATGTTTTTCTAATGTTGGTTCATTGCACACTAGTTTTTGTCTGTGTATTTTTCAAATGTTTCAATGACATAATGTATCTTTTTCAAGATATTTGTCTGTGTATTCATAATGTATTACAGTTAGAGCAGGAACAATAGCAGGCTATAAGCTAGCTGCAAACATATTTTAAGAAGATAAATGATGAGAGAGAGAAACAACGGGCTACAGATTTGTAGCCAGTTGTAGCACGAACTCCAAGACGAAGTGTGTGTATGATAGGTGGGACCAGGTATTAATAGTGTAGTGTGTAACTATTGTATGAATGAGCTATTAGAGCAAGTTTAATAATATAGCCCACTACTAGCTCCAATTCATCTATAACCGATCTAATAGCCAATTCATACAATAGTTGCTTACTATACTATTAATATATGGTCCTACCTATCATACACACATTGCGTCTTGAAGTCCGTGCTGCAGCTAGCTACAAATCTGTAGCCCGCTGCTCTTCTCTCTCGTCCTTTATCTCATTAAAATATGTTTATAGCTGGCTAATAGTTTGCTATTGTACCCGCTCTTAGATTGACTATAGATAAACTAGAGCTAGTAGTTTTTTTTTTGACAGGAAACGTGCTCTTTATTAATACCTTGGTTCAGTGTAATCACAAACCACAAAACACTGTACAAAATCCGGGAGGGGGTCTGCCCATATTGACATATGACACGGGTCCCAACTAGCCCCTTTCCGGGCCAGTTCATGAGCACAACTATTACATGAACGATTAGCAAAAGACACTTTGATCATACCTAAGTCCATACGGAGCAGAGTTCTAATTTGTTTAAAAGTCATGCCCGCTGTAGACTGGTCGTAGCAAGCGGAGTCTAGTGCGCTCACCAGGATGGAGCTATCTGTTTCAACAGAGAAATACGAAAAGCCATGATTTAGAACAGCACGCAAGGCATGCAGACAAGCGACGGCTTCCGCGCTAAGCGCATCATGCACCAGTTCGATTCGTCCTACTCCAGCCAGGACCCCATTCCCCTCATGGTCCCGAAGGATAAAGCCCCAGCCACCACTTAGATTAGCCGCCTGGAAAGCACCATCAATGTTCAGCTTTAGAACACCCTGGGGAGGCGGACACCATGTCCTTTGACTGCTAGGATTTCCCCGAGCGTTGTCCCGAAAGAGCAAGGAGTTTTCTGACACCATCCTTATGACTCTGCTATATACCTCTTCATGCGTTCTCCTATCCTCCCCAGCATTCACTTTGTTTCTTGCATCCCACCAATTCCAGAGCAGTATGACAGTCGTTAACATAATGTCTTCTCTCAAATTCAGAATGTGCTTACATACATCCTACGTAGAAGTCTGAAGAGAAAGCTCCTGCCTAATGTGCTCAAAGTTCAGCATGCGCCAACAAGGTTTGACAAATTTGCACTTGAAGAAACAGTGGCCACCATTCTCATCTAACCGGAGGCAGACTGGGCACCTTGTATCGATCTCCATACCTCTTTTACTAATATTCTGACGGAGTGGCAAACTGTTGTGCGCTAAGCGCCACAGGAAATGCTTCACCTTAGGAAGGTGATTCAGTCTCCATAGCTTCTCCCACTGAAGGGCTGCACTGCTCGTTTTCCCCGATGAAGATTCACCTATTTGTCGTATTGCCTGACGATCACGCTGATATTCCAGAGTGTGGTATGCTGACTTCACCAAAAAAATGCCCCTTGGGTCAAAATGCCATGCTGCAACATCGCTATAGCCATTATGAACTGGGATGGCTAGAATGTTTTTCACATCCTCCTCCCAGAATATATCCTGGATCAACTCTCTATCCCATTCTCCGGTAATTGGATTAATTAAGTCAGCAACTTTGTTCAGAACGATCCCTCTCCTTGGGGTAGTTGGCCTCCTGGTTGTACCCAAGGGGATCCATGGGTCGTTCCACATATCTATGTCGGTACTATCACCAACACGCCAGATTAGGCCAACCTTCAACACCTGCACCCCCCGAACAATACTTCTCCAAGAATATGAGATGCCCGGACTTTCTCTAACCTCCATAAGCTTCCCATCTGGGAAATATTTGGCCTTTAACACTCTTGCGCACAATGAGTCTAGATTGGAAAGGAGCCGCCACGCTTGACGGGCTAACATCGCTAGATTGAAAAGGTGGAGGTCTCTGTATCCCAGGCCCCCTTTTTCCGTTCGACTGCATAGTTTGTCCCAGGCAATCCAATGCATTTTGTTTTCCCGATCATGCTGTGCCCAAAAGAAACGGGAGATCAAACTGCTTATTTCATCGCAAAGGGTTTTTGTCAGGTCAAAACATGACATTGCAAAAGCTGGAATAGCTTGTGCCACAGCTTTGATCAAAATATCCTTCCCGGCACGCGACAACAACTTCTCCTTCCAGCCTTGTATCTTCTTCCAGACCCTCTCCTTCAAATAATTGAAGGTCTTTTTCTTTGATCTCCCCATATACACTGGCAATCCCAGATATTTTTCATTCCATGCTTCAACCCCGATATCTAAGGCATATCTAAAAGACTCCCTCTTATATTCCCTCGTGTTTCTGCTAAATATAACTTAACTTTTCTCCTTGTTGATAGTTTGGCCAGAGCATTTTTCATACAGAGACAACACATTCTGCAGATACCCCGCGCTCCGTTCATCAGCCTTTAGGAGCAGCAATGAGTCATCCGCAAACAAGAGATGATTAATACTTGGCGCATTTTGACATACTCTCACCCCCGTCAGGTCGCCTCGTTCTTCAGCAGCATTCAACAGGGACGAAAATCCTTCTGCACATATCAAAAACAGGTACGGCGAAATCGGATCCCCTTGACGCAATCCTCTGGTTGGCAT

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CDS seq

ATGCCAACCAGAGGATTGCGTCAAGGGGATCCGATTTCGCCGTACCTGTTTTTGATATGTGCAGAAGGATTTTCGTCCCTGTTGAATGCTGCTGAAGAACGAGGCGACCTGACGGGGGTGAGAGTATGTCAAAATGCGCCAAGTATTAATCATCTCTTGTTTGCGGATGACTCATTGCTGCTCCTAAAGGCTGATGAACGGAGCGCGGGGTATCTGCAGAATGTGTTGTCTCTGTATGAAAAATGCTCTGGCCAAACTATCAACAAGGAGAAAAATATCGGGGTTGAAGCATGGAATGAAAAATATCTGGGATTGCCAGTGTATATGGGGAGATCAAAGAAAAAGACCTTCAATTATTTGAAGGAGAGGGTCTGGAAGAAGATACAAGGCTGGAAGGAGAAGTTGTTGTCGCGTGCCGGGAAGGATATTTTGATCAAAGCTGTGGCACAAGCTATTCCAGCTTTTGCAATGTCATGTTTTGACCTGACAAAAACCCTTTGCGATGAAATAAGCAGTTTGATCTCCCGTTTCTTTTGGGCACAGCATGATCGGGAAAACAAAATGCATTGGATTGCCTGGGACAAACTATGCAGTCGAACGGAAAAAGGGGGCCTGGGATACAGAGACCTCCACCTTTTCAATCTAGCGATGTTAGCCCGTCAAGCGTGGCGGCTCCTTTCCAATCTAGACTCATTGTGCGCAAGAGTGTTAAAGGCCAAATATTTCCCAGATGGGAAGCTTATGGAGGTTAGAGAAAGTCCGGGCATCTCATATTCTTGGAGAAGTATTGTTCGGGGGGTGCAGGTGTTGAAGGTTGGCCTAATCTGGCGTGTTGGTGATAGTACCGACATAGATATGTGGAACGACCCATGGATCCCCTTGGGTACAACCAGGAGGCCAACTACCCCAAGGAGAGGGATCGTTCTGAACAAAGTTGCTGACTTAATTAATCCAATTACCGGAGAATGGGATAGAGAGTTGATCCAGGATATATTCTGGGAGGAGGATGTGAAAAACATTCTAGCCATCCCAGTTCATAATGGCTATAGCGATGTTGCAGCATGGCATTTTGACCCAAGGGGCATTTTTTTGGTGAAGTCAGCATACCACACTCTGGAATATCAGCGTGATCGTCAGGCAATACGACAAATAGGTGAATCTTCATCGGGGAAAACGAGCAGTGCAGCCCTTCAGTGGGAGAAGCTATGGAGACTGAATCACCTTCCTAAGGTGAAGCATTTCCTGTGGCGCTTAGCGCACAACAGTTTGCCACTCCGTCAGAATATTAGTAAAAGAGGTATGGAGATCGATACAAGGTGCCCAGTCTGCCTCCGGTTAGATGAGAATGGTGGCCACTGTTTCTTCAAGTGCAAATTTGTCAAACCTTGTTGGCGCATGCTGAACTTTGAGCACATTAGGCAGGAGCTTTCTCTTCAGACTTCTACAGAAGACATTATGTTAACGACTGTCATACTGCTCTGGAATTGGTGGGATGCAAGAAACAAAGTGAATGCTGGGGAGGATAGGAGAACGCATGAAGAGGTATATAGCAGAGTCATAAGGATGGTGTCAGAAAACTCCTTGCTCTTTCGGGACAACGCTCGGGGAAATCCTAGCAGTCAAAGGACATGGTGTCCGCCTCCCCAGGGTGTTCTAAAGCTGAACATTGATGGTGCTTTCCAGGCGGCTAATCTAAGTGGTGGCTGGGGCTTTATCCTTCGGGACCATGAGGGGAATGGGGTCCTGGCTGGAGTAGGACGAATCGAACTGGTGCATGATGCGCTTAGCGCGGAAGCCGTCGCTTGTCTGCATGCCTTGCGTGCTGTTCTAAATCATGGCTTTTCGTATTTCTCTGTTGAAACAGATAGCTCCATCCTGGTGAGCGCACTAGACTCCGCTTGCTACGACCAGTCTACAGCGGGCATGACTTTTAAACAAATTAGAACTCTGCTCCGTATGGACTTAGACCCCCTCCCGGATTTTGTACAGTGTTTTGTGGTTTGTGATTACACTGAACCAAGTCCATTTGTTGAAACATCAAGATTTGCAAAGCATACCAATATGGCTTTCTTCCTCCCGCTTCCACACCAGGTTGTAGAGATCTCATTCGCCAGTTACAGCGTCTTGACATCTCCATTTATGTCACTCCACCTCGAAGGTCAAGTTTCATCTGACGTTGCTGCCTCCCGGCTGCTTCCCTGCGACAACCCTTTGCTTAGCCACCTTTGCTCACGACCGGTTCCCCCCGAGCACTATATGGCCAGGTCCAACAAGGAGATGGCAACGGTGAGGAAGAACTTGAACGGGAACATAGAGGCAAGGGAGGGCATCGATCTTAACAACGTCAATGATGTGGGGATGGGTTTGGAGGAGATTGCTAATTGGGTTGCTTATTGA

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Protein seq

MPTRGLRQGDPISPYLFLICAEGFSSLLNAAEERGDLTGVRVCQNAPSINHLLFADDSLLLLKADERSAGYLQNVLSLYEKCSGQTINKEKNIGVEAWNEKYLGLPVYMGRSKKKTFNYLKERVWKKIQGWKEKLLSRAGKDILIKAVAQAIPAFAMSCFDLTKTLCDEISSLISRFFWAQHDRENKMHWIAWDKLCSRTEKGGLGYRDLHLFNLAMLARQAWRLLSNLDSLCARVLKAKYFPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDSTDIDMWNDPWIPLGTTRRPTTPRRGIVLNKVADLINPITGEWDRELIQDIFWEEDVKNILAIPVHNGYSDVAAWHFDPRGIFLVKSAYHTLEYQRDRQAIRQIGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLPLRQNISKRGMEIDTRCPVCLRLDENGGHCFFKCKFVKPCWRMLNFEHIRQELSLQTSTEDIMLTTVILLWNWWDARNKVNAGEDRRTHEEVYSRVIRMVSENSLLFRDNARGNPSSQRTWCPPPQGVLKLNIDGAFQAANLSGGWGFILRDHEGNGVLAGVGRIELVHDALSAEAVACLHALRAVLNHGFSYFSVETDSSILVSALDSACYDQSTAGMTFKQIRTLLRMDLDPLPDFVQCFVVCDYTEPSPFVETSRFAKHTNMAFFLPLPHQVVEISFASYSVLTSPFMSLHLEGQVSSDVAASRLLPCDNPLLSHLCSRPVPPEHYMARSNKEMATVRKNLNGNIEAREGIDLNNVNDVGMGLEEIANWVAY

Function Putative ribonuclease H protein At1g65750 [UniProtKB/Swiss-Prot:P0C2F6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_07G0376900 OsMH63_07T0376900.1 Chr07 24379560 24383086 - maker
CDS seq

ATGCCAACCAGAGGATTGCGTCAAGGGGATCCGATTTCGCCGTACCTGTTTTTGATATGTGCAGAAGGATTTTCGTCCCTGTTGAATGCTGCTGAAGAACGAGGCGACCTGACGGGGGTGAGAGTATGTCAAAATGCGCCAAGTATTAATCATCTCTTGTTTGCGGATGACTCATTGCTGCTCCTAAAGGCTGATGAACGGAGCGCGGGGTATCTGCAGAATGTGTTGTCTCTGTATGAAAAATGCTCTGGCCAAACTATCAACAAGGAGAAAAATATCGGGGTTGAAGCATGGAATGAAAAATATCTGGGATTGCCAGTGTATATGGGGAGATCAAAGAAAAAGACCTTCAATTATTTGAAGGAGAGGGTCTGGAAGAAGATACAAGGCTGGAAGGAGAAGTTGTTGTCGCGTGCCGGGAAGGATATTTTGATCAAAGCTGTGGCACAAGCTATTCCAGCTTTTGCAATGTCATGTTTTGACCTGACAAAAACCCTTTGCGATGAAATAAGCAGTTTGATCTCCCGTTTCTTTTGGGCACAGCATGATCGGGAAAACAAAATGCATTGGATTGCCTGGGACAAACTATGCAGTCGAACGGAAAAAGGGGGCCTGGGATACAGAGACCTCCACCTTTTCAATCTAGCGATGTTAGCCCGTCAAGCGTGGCGGCTCCTTTCCAATCTAGACTCATTGTGCGCAAGAGTGTTAAAGGCCAAATATTTCCCAGATGGGAAGCTTATGGAGGTTAGAGAAAGTCCGGGCATCTCATATTCTTGGAGAAGTATTGTTCGGGGGGTGCAGGTGTTGAAGGTTGGCCTAATCTGGCGTGTTGGTGATAGTACCGACATAGATATGTGGAACGACCCATGGATCCCCTTGGGTACAACCAGGAGGCCAACTACCCCAAGGAGAGGGATCGTTCTGAACAAAGTTGCTGACTTAATTAATCCAATTACCGGAGAATGGGATAGAGAGTTGATCCAGGATATATTCTGGGAGGAGGATGTGAAAAACATTCTAGCCATCCCAGTTCATAATGGCTATAGCGATGTTGCAGCATGGCATTTTGACCCAAGGGGCATTTTTTTGGTGAAGTCAGCATACCACACTCTGGAATATCAGCGTGATCGTCAGGCAATACGACAAATAGGTGAATCTTCATCGGGGAAAACGAGCAGTGCAGCCCTTCAGTGGGAGAAGCTATGGAGACTGAATCACCTTCCTAAGGTGAAGCATTTCCTGTGGCGCTTAGCGCACAACAGTTTGCCACTCCGTCAGAATATTAGTAAAAGAGGTATGGAGATCGATACAAGGTGCCCAGTCTGCCTCCGGTTAGATGAGAATGGTGGCCACTGTTTCTTCAAGTGCAAATTTGTCAAACCTTGTTGGCGCATGCTGAACTTTGAGCACATTAGGCAGGAGCTTTCTCTTCAGACTTCTACAGAAGACATTATGTTAACGACTGTCATACTGCTCTGGAATTGGTGGGATGCAAGAAACAAAGTGAATGCTGGGGAGGATAGGAGAACGCATGAAGAGGTATATAGCAGAGTCATAAGGATGGTGTCAGAAAACTCCTTGCTCTTTCGGGACAACGCTCGGGGAAATCCTAGCAGTCAAAGGACATGGTGTCCGCCTCCCCAGGGTGTTCTAAAGCTGAACATTGATGGTGCTTTCCAGGCGGCTAATCTAAGTGGTGGCTGGGGCTTTATCCTTCGGGACCATGAGGGGAATGGGGTCCTGGCTGGAGTAGGACGAATCGAACTGGTGCATGATGCGCTTAGCGCGGAAGCCGTCGCTTGTCTGCATGCCTTGCGTGCTGTTCTAAATCATGGCTTTTCGTATTTCTCTGTTGAAACAGATAGCTCCATCCTGGTGAGCGCACTAGACTCCGCTTGCTACGACCAGTCTACAGCGGGCATGACTTTTAAACAAATTAGAACTCTGCTCCGTATGGACTTAGACCCCCTCCCGGATTTTGTACAGTGTTTTGTGGTTTGTGATTACACTGAACCAAGTCCATTTGTTGAAACATCAAGATTTGCAAAGCATACCAATATGGCTTTCTTCCTCCCGCTTCCACACCAGGTTGTAGAGATCTCATTCGCCAGTTACAGCGTCTTGACATCTCCATTTATGTCACTCCACCTCGAAGGTCAAGTTTCATCTGACGTTGCTGCCTCCCGGCTGCTTCCCTGCGACAACCCTTTGCTTAGCCACCTTTGCTCACGACCGGTTCCCCCCGAGCACTATATGGCCAGGTCCAACAAGGAGATGGCAACGGTGAGGAAGAACTTGAACGGGAACATAGAGGCAAGGGAGGGCATCGATCTTAACAACGTCAATGATGTGGGGATGGGTTTGGAGGAGATTGCTAATTGGGTTGCTTATTGA

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Protein seq

MPTRGLRQGDPISPYLFLICAEGFSSLLNAAEERGDLTGVRVCQNAPSINHLLFADDSLLLLKADERSAGYLQNVLSLYEKCSGQTINKEKNIGVEAWNEKYLGLPVYMGRSKKKTFNYLKERVWKKIQGWKEKLLSRAGKDILIKAVAQAIPAFAMSCFDLTKTLCDEISSLISRFFWAQHDRENKMHWIAWDKLCSRTEKGGLGYRDLHLFNLAMLARQAWRLLSNLDSLCARVLKAKYFPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDSTDIDMWNDPWIPLGTTRRPTTPRRGIVLNKVADLINPITGEWDRELIQDIFWEEDVKNILAIPVHNGYSDVAAWHFDPRGIFLVKSAYHTLEYQRDRQAIRQIGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLPLRQNISKRGMEIDTRCPVCLRLDENGGHCFFKCKFVKPCWRMLNFEHIRQELSLQTSTEDIMLTTVILLWNWWDARNKVNAGEDRRTHEEVYSRVIRMVSENSLLFRDNARGNPSSQRTWCPPPQGVLKLNIDGAFQAANLSGGWGFILRDHEGNGVLAGVGRIELVHDALSAEAVACLHALRAVLNHGFSYFSVETDSSILVSALDSACYDQSTAGMTFKQIRTLLRMDLDPLPDFVQCFVVCDYTEPSPFVETSRFAKHTNMAFFLPLPHQVVEISFASYSVLTSPFMSLHLEGQVSSDVAASRLLPCDNPLLSHLCSRPVPPEHYMARSNKEMATVRKNLNGNIEAREGIDLNNVNDVGMGLEEIANWVAY

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0044345 0.0085675 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g38450 RBH 0.129105 0.175965 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0020310 RBH 0.304319 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0020250 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0020190 RBH 0.000000 0.0 1.269936
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0020100 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0020170 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0020610 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0389800 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0019960 RBH 0.067353 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0020070 RBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0020010 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0020190 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0019930 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G019830 RBH 0.368770 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0019930 RBH 0.802106 4.703659 0.412018
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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