Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0340700 | OGI:07006270 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:21873397-21877862 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAGAGGAATTTTCTCTCTTCTGGGAGGCAAAGATTGTGGTTGTGATTGAGATCTAGTCTTATAACACTCCATATGCCATTATTTTCTCTAACAACCATCACACATTTGCAATCAGTTCTCAATAGAACATTTGTATTTCTTGTCCCTTTCTTTTTCTGAACTTGGTTGGTTGCATTGTCCTGATTTTTTCCATGCCTGTTGCATTTGTATGTGTATTTGATGACTTCATTGTTCCTTTTCTTGTCACTGGTCTTCAGGCTGTGGGCAATCACAATGGAGAATCCAATTAAATAAGCATAGAAATTGAAGAATGTGTATGCTTCATCATCAGTCTTGAATTGCATCCCTTCACAAGGTATATGACGGCTGTCTATCTCATCATTGTCAGCTTCCTCTTCATCTGCTGCACTTTCTTTATTTTCTTTGTCTGTCATTTCTGCATTATCTTCTGTAGAAGCTATGCCAGCTTGCACTGCACCATTTACTTGCTCAAGTGTTGAATTCTCTGTGCTAGTAATTTGTACCTGAATTTTTAAAAAAATATTTCATATTATGTGTTAGTAGTCGCACTTGGATGTTAAGTAGTAAAGAAACATTATTTTTATTGTACAATATTATAACAAAAAAATGAACATTTGTTCTAAAGTAACCTCATTGCCCCAATTGTCTTCATGTTCCTCCAATAACCATTGATTCACATTGGAGCACTCTCCAATAGAGTTGCACACTGACTCAATATTGTGTATGTGCTGCAAAATCAACTTGTTCTCTTAATTTTTGTTTTTTGTTGTAATAAAAAAAGTATCCCCATACATACAAATAAAAATAAAAACATATTATAAACTAACAAAACACATACATAGTGATTGTCATTGTTACTGTTATATATTTTCTCTATATCATTTTCCATGCATTGGTCTTCAAAAGGCATCTACATGGACAAGTGGGAGCATGTGTAAGAAACGAGATTTTTTTTTGCTTTTTTGTTTAATATTTTGTGTTAATTATCTTACTATACCTGCACTTCTTGTTTTGCTTCAAGAACTGCTTGATCAAAGTTATCAATGCATCTGTTTGTTGTGAGAATCATTGAGTTCTGCATGGAAGACAAAATAAATAGTGTGTTACAATTGGAAATACAGTAATATAGTTATGTCCAGTTTGTTGTTCAAATACCAAGTTAAGAGTTTTATCCAACTTACACTGTATCCTATTGGTGATTGAAGGTGATAGTTCATTTCAGCAAGCCTTCCCTGCATTTTTTTTGTCCAGAAAATTTATTAGTTTAACACGAAACTTTTAATTTCAGCGCTGATTGCTTTTACAAAAAAGTTATGATTTGCTTCTTGTCACCTGATTGGTATGCAAGTTTATCTTAGGACTTTGACTTTGAATAACTTGCTGCATCAGCGCTGTGTAGCTCATTTGTTGTCCCTGCATATATTTCAACATTAAATTTATTAGCAATATAATAATAAAGACTGTTATCACTATGTCCAACTAATTTTTTTTCTCTCACCAGCTTTGTTTGCGAGCTTAGCAACGCGTACTCTTCATGTAACATCTGTCCCCCATAAGCTATTTCTGGAGAATTGGTACCTGCATTTTGATAAGAAAAAATGTTAGTTGTAGTTTTATAATTTTATCATTTTTCTATCAAATAAAATTTCAGTTGTTTTATTATTTCCCATAATTTTGTTCATATAGCATGGTTCACTGTGATTTATATGCTGTCTAGTTTCTATCTCCCAAATTGGCACTTTTTGTTTGAACTGCATTTTTTAAAAAACTTAAATAACAAAAACAAGAAATTTACAAATGTAAATTCAGTTATAGACCAATGTAAGTTTATTTATTATTTAAATACTAGTCTTTTATAGACTCATCAACCAATCTCCTTGTTTTGAAATGCATTAAATTTGTTTCATTGGAACTTACATTGACATTATATTGAAATTACATATGTAATTTACACGGTAGGTCAATGTAATTCTACCGAATTATAGTAAATTAGTCTAGGTTTGTTTTATGAACTGTGAATTTTGTTTTGTGAATGTAATTTTCTGTTTTCTTCATTGATATGAATATAGTAGTTCAAATTGAAGTTAAAAAAATACGGTTTTGCTATAGTTATATCGCCATAAATCTTCTCTAATTACAGTAAGTTTGTTAGCCCTCAAAGTTTCGTTTAGATTCGTGCAGGACTGCTTTGCCATTGTGCGTGCAAGCACTAGTCCGTACTATATACACATGCACCTGTGCTGCTTGCTGTGATTTATCCGATCGATCACGCTCCTTTGCTATCTACATGTAAAATTACACCCTACTTACACTCTATTTACATATGTAATTTTAATATTACATATGTAATTTTAGGATTTACATATGTAATTTTGGATATTTACATTGAGAGCAGTGCTCTTGCAGTTTGTTCTCTTACATTAGTTATACATTGAAACTACAAATGTAATTTTAGTAATAGGTAAATGTATTTTTTTATCATACTTACACCCGACTTACAAACTAGTTACATCCTAGTTACACCCTACTTACACACTAGTTACATCCTAGTTATACCCTACTTACATCCTAGTTACATATGTAATTTTTATTATATTTGACTGTAAATTTTGTGTTGTCCTATTTCTAGGTAAAATTTAATTTGCTATGTCTCATCAACGGGTTATGTTGTGTCAATGTGCTTTGTCACGTTAGTTTGCATATGCTAATGAAATATTGAATTCTGACTGTTTTTTCTTAACTCTTATGTAAGTACTAAAATTACATATGTAAATTAGAAAATTACATACCAATTACATATGTAAGTGGGGTGTAAATGAGGTGTAACTACTGTGTAAGTGGCTGAAAAAAATCGACTGTAGCATATGGCGCCATATTTCTAGCAACTCCGTATTAGTTCAATAGAGAGCAATGCTCTTGCAGTTTGTCGTTTAAATTGAAGTTGAAGTATAATTTCTCTGGAATGAAGTAGTTTTATAATTGTATTCAAGTTTGGTGTAGATTTACACTATTTTTCCTGAACTTACATTGATTTAATATTGAAATTACAAATGTAATTTTCATCTATGGCCAATGTAATTTTCTCCTTTTTAAGTTTATTTTTCGCTAGGTTAGTACTTTACTGTGTAATTTTGTTTTCAACTTCTATATATATTTTTATATGAATTTAATTTAGTTTACAGTGAAGATGTTGGCATCATTGTAGCAATTTGTTCACTTCTTACATTGTTAATATGTTGAAATTACAAATGTAATTTTAGTTACTGGTGAATGTATTTTCTTTTTGCAATTTTGTAACTTGTTGTTTCCTAACATTCAATTTTGTAGTTCTTTGTTTTAACTACTTCTAATTTTGTAAGTGTGTATATTCCTATGTTCATGGACTGCCTGGATTAGTCTTCATTGATTCACGGCGAGATGTTGCTAGCTTCTTGTGTGCCATGTTATATGAATTGATTGAAAACAAAACTTGTATTCATGTCTGGTCACTTGGGCATTTTTTTGGTAGGATGTAAAAATTTTGGACAGTGAAACACAATTGACAGTATCTACTGTACTTTGTACTTGAAAGCATCCCCATTGTTGTGTTTTATCTCAATTTACATTGCATACAGACTAAACTTACAAATGTAATTTTAGTATTAGGTGATTGTAATTTTTTGAGGAGTTTGTTTTTATGGCATTAGCAAACTCTAAACTTTCATAATGTTGAAATTTTGGGCAAAATGTCTTACTGTATGGTGGATTGGGGCGATTGGGGGTGGTGTAGTATTAGGTGTATAGTGAAGTAAGAAAATTTCAAAAAGTAAGCTGCAAAATGGATTTGTTTTTAGTAGTTGATTGTTGTATACATTATTCATCAGTAGTGCTTCTCCTGGATAGTGATGTTTGTATTTTGGTTTGTCAGTAGTTTTTCACTAATTTAATTTATTAAATGCAACAAGCTTGATCTGATCAGCATATTCATTTTCCAGATCTAGGTGACTTTGGTGAGAAGTATATTGTGTTAAGATGAAAGGAGTATGTGTGGGGGGATGCGACTTGCATATATGTCATGAAGAAGAACATAAAACAGATCTGGATGCCATATAGCTATAAGGTTTGTAAGATTCTTACCTGCAGAAGACAAGTTTGCTCTAGGGTTTGTGCTCTCTTCCATCTGAATGGATTTTGCGATCTGCTTTTCTGATGAGAAATCCTTGGTTGTTGAGATTGTAGGATTTCCCATGGTGTTTTTTTCTTGAGCAGATTCCAATTCCTTTTGTCTAGATTTCTCAGCGATCTCCATGGTTGGGGGGAGAGAACGAGCTAGATGAGCACTTGTCACGTGGTTTGCTCTGATCTTTTCTAAAGTGCTTAATTGGCGTTGCTTTTCACTTGGCATGTCTTTTTCCTTTCTTTTGTAGCTGAAGATGAACCCTTTTTTTTTCTGGCTGTCACTCAT
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| CDS seq | ATGAGTGACAGCCAGAAAAAAAAAGGGTTCATCTTCAGCTACAAAAGAAAGGAAAAAGACATGCCAAGTGAAAAGCAACGCCAATTAAGCACTTTAGAAAAGATCAGAGCAAACCACGTGACAAGTGCTCATCTAGCTCGTTCTCTCCCCCCAACCATGGAGATCGCTGAGAAATCTAGACAAAAGGAATTGGAATCTGCTCAAGAAAAAAACACCATGGGAAATCCTACAATCTCAACAACCAAGGATTTCTCATCAGAAAAGCAGATCGCAAAATCCATTCAGATGGAAGAGAGCACAAACCCTAGAGCAAACTTGTCTTCTGCAGGTACCAATTCTCCAGAAATAGCTTATGGGGGACAGATGTTACATGAAGAGTACGCGTTGCTAAGCTCGCAAACAAAGCTGGGACAACAAATGAGCTACACAGCGCTGATGCAGCAAGTTATTCAAAGTCAAAGTCCTAAGATAAACTTGCATACCAATCAGGGAAGGCTTGCTGAAATGAACTATCACCTTCAATCACCAATAGGATACAGTAACTCAATGATTCTCACAACAAACAGATGCATTGATAACTTTGATCAAGCAGTTCTTGAAGCAAAACAAGAAGTGCAGGTACAAATTACTAGCACAGAGAATTCAACACTTGAGCAAGTAAATGGTGCAGTGCAAGCTGGCATAGCTTCTACAGAAGATAATGCAGAAATGACAGACAAAGAAAATAAAGAAAGTGCAGCAGATGAAGAGGAAGCTGACAATGATGAGATAGACAGCCGTCATATACCTTGTGAAGGGATGCAATTCAAGACTGATGATGAAGCATACACATTCTTCAATTTCTATGCTTATTTAATTGGATTCTCCATTGTGATTGCCCACAGCCTGAAGACCAGTGACAAGAAAAGGAACAATGAAGTCATCAAATACACATACAAATGCAACAGGCATGGAAAAAATCAGGACAATGCAACCAACCAAGTTCAGAAAAAGAAAGGGACAAGAAATACAAATGTTCTATTGAGAACTGATTGCAAATGTGTGATGGTTGTTAGAGAAAATAATGGCATATGGAGTGTTATAAGACTAGATCTCAATCACAACCACAATCTTTGCCTCCCAGAAGAGAGAAAATTCCTCTAA
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| Protein seq | MSDSQKKKGFIFSYKRKEKDMPSEKQRQLSTLEKIRANHVTSAHLARSLPPTMEIAEKSRQKELESAQEKNTMGNPTISTTKDFSSEKQIAKSIQMEESTNPRANLSSAGTNSPEIAYGGQMLHEEYALLSSQTKLGQQMSYTALMQQVIQSQSPKINLHTNQGRLAEMNYHLQSPIGYSNSMILTTNRCIDNFDQAVLEAKQEVQVQITSTENSTLEQVNGAVQAGIASTEDNAEMTDKENKESAADEEEADNDEIDSRHIPCEGMQFKTDDEAYTFFNFYAYLIGFSIVIAHSLKTSDKKRNNEVIKYTYKCNRHGKNQDNATNQVQKKKGTRNTNVLLRTDCKCVMVVRENNGIWSVIRLDLNHNHNLCLPEERKFL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0340700 | OsMH63_07T0340700-mRNA-1 | Chr07 | 21873397 | 21877862 | - | maker | ||
| CDS seq | ATGAGTGACAGCCAGAAAAAAAAAGGGTTCATCTTCAGCTACAAAAGAAAGGAAAAAGACATGCCAAGTGAAAAGCAACGCCAATTAAGCACTTTAGAAAAGATCAGAGCAAACCACGTGACAAGTGCTCATCTAGCTCGTTCTCTCCCCCCAACCATGGAGATCGCTGAGAAATCTAGACAAAAGGAATTGGAATCTGCTCAAGAAAAAAACACCATGGGAAATCCTACAATCTCAACAACCAAGGATTTCTCATCAGAAAAGCAGATCGCAAAATCCATTCAGATGGAAGAGAGCACAAACCCTAGAGCAAACTTGTCTTCTGCAGGTACCAATTCTCCAGAAATAGCTTATGGGGGACAGATGTTACATGAAGAGTACGCGTTGCTAAGCTCGCAAACAAAGCTGGGACAACAAATGAGCTACACAGCGCTGATGCAGCAAGTTATTCAAAGTCAAAGTCCTAAGATAAACTTGCATACCAATCAGGGAAGGCTTGCTGAAATGAACTATCACCTTCAATCACCAATAGGATACAGTAACTCAATGATTCTCACAACAAACAGATGCATTGATAACTTTGATCAAGCAGTTCTTGAAGCAAAACAAGAAGTGCAGGTACAAATTACTAGCACAGAGAATTCAACACTTGAGCAAGTAAATGGTGCAGTGCAAGCTGGCATAGCTTCTACAGAAGATAATGCAGAAATGACAGACAAAGAAAATAAAGAAAGTGCAGCAGATGAAGAGGAAGCTGACAATGATGAGATAGACAGCCGTCATATACCTTGTGAAGGGATGCAATTCAAGACTGATGATGAAGCATACACATTCTTCAATTTCTATGCTTATTTAATTGGATTCTCCATTGTGATTGCCCACAGCCTGAAGACCAGTGACAAGAAAAGGAACAATGAAGTCATCAAATACACATACAAATGCAACAGGCATGGAAAAAATCAGGACAATGCAACCAACCAAGTTCAGAAAAAGAAAGGGACAAGAAATACAAATGTTCTATTGAGAACTGATTGCAAATGTGTGATGGTTGTTAGAGAAAATAATGGCATATGGAGTGTTATAAGACTAGATCTCAATCACAACCACAATCTTTGCCTCCCAGAAGAGAGAAAATTCCTCTAA
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| Protein seq | MSDSQKKKGFIFSYKRKEKDMPSEKQRQLSTLEKIRANHVTSAHLARSLPPTMEIAEKSRQKELESAQEKNTMGNPTISTTKDFSSEKQIAKSIQMEESTNPRANLSSAGTNSPEIAYGGQMLHEEYALLSSQTKLGQQMSYTALMQQVIQSQSPKINLHTNQGRLAEMNYHLQSPIGYSNSMILTTNRCIDNFDQAVLEAKQEVQVQITSTENSTLEQVNGAVQAGIASTEDNAEMTDKENKESAADEEEADNDEIDSRHIPCEGMQFKTDDEAYTFFNFYAYLIGFSIVIAHSLKTSDKKRNNEVIKYTYKCNRHGKNQDNATNQVQKKKGTRNTNVLLRTDCKCVMVVRENNGIWSVIRLDLNHNHNLCLPEERKFL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g31420 | SBH | 1.279620 | 2.422621 | 1.398303 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0017740 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0015550 | SBH | 0.643263 | 2.532628 | 2.382915 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0019540 | SBH | 1.136249 | 4.652813 | 4.869610 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017500 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017650 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0111800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018150 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0355200 | RBH | 0.0094375 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017370 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017560 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017500 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0017760 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017540 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G015380 | SBH | 1.100525 | 2.967802 | 3.084758 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0015300 | SBH | 2.199576 | 10.233022 | 10.941058 |
