Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0122200 | OGI:02095790 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:7255226-7256518 | ||||||||
| Gene Symbol | MSL26, OsMSL26, MSL32, OsMSL32, - | ||||||||||
| DNA seq | TTATTCCTTAGCAAGTTCTCTAGCTAATTGGTCCAACACATTTTCATGTCTCTTCAGTTTTGCTTCACTGAAGGTTGATGTATCCTTCTCCATCAGTTTTAAATACATTTGGTATTTTTCTGCCCTTGCCTTCTCTTTTTTTGCAATTGCCTTCTCTTTTTTAGCTTCTGCTCCAATCAGTGTTGCTTCTGCTGCCTTTAGCAATGCTGCTGCTTTAGTTGTAATAGCTTTATGAAAGAGAACCATATTTTGATTTGGCTTATCCCCTAAAGGTGATGGTGCACCTTTTCCTTTTTGCCTCTGTTTTGCTGCTTTCTGCCCCTCAGGGCGCTTCTCTTTGCGCTCTGTTTCCTCCTCTGTGTCTTGGTTCGACGATGAAGTATATGCTCCTGATTCAGAAATCTTGTTCCTCTTATTATGGCTACTCTCTTCAAGTACTCTACGCCATTTAGGTTGATCTTTAAGATCTTTCCACATATACTCCAAGGTGAAAGGTTTTTGGTTGTTATGCTTTTTGTACCATTCACGGGCTTTCTCCATTATCATATCATCAGAATACCCACTTGTGAAAGTAGTTCTAGCTTTAGAATAAAATCCACAGAACTTAGTGACATCTCTCTTGACATTGTCCCAATGTGTTCTGCATTGCTTGGGGTTCCTTTTGTTCCCATTGCTAGGCATATTGCTGTTGAACTCTCTAGCTACAGCCTTCCAATATTGTTCTGATTTCTTGTCATTGCCTTTGATGGGATCAACTGAATTGTTCAACCAAGAACTCATTAGTCGTATATTGTCATCTTCAGTCCAATTGATGCGTGTCCCTCTTCTTCCTTCTTCACTGCTATCACTTGCCTCTTCAACCTCAACTACTTCTTTCTCATTATGTCTTGTATGACATGGAGAAGCTGATCCATGAGAAGAAGTGTTGGCTGCAGCCCCAATTGAAGTACTATATTGCATACCAAACTGTGATCTATTGGCTGCAAATCCAAATGCTTGGTTAGATGAGTGCACCAGATTTTCTTGAAGTTGAAAACCTTCCAAGCTTCCTGGAGTAGGTTGCCCATAATAATCTTGTTGCTGAGCACCTTGAAAGATTGGAGGGTGTCGATATGGCTGGTAGTTGCTTGGAGGACCAAAAGGATGGAAATTTTGGAGAAAACTAGGTCTGAAGTTTTGAGGATAACTTGTGGGAAATTGGGTAGAAGGGGAGTTTTGGGCATCACTATTTGTTGCTTGGCTTGAGGAACCTTGGTTGAGGAGGTTTGAGAAGTTTCCTTTGAAAGGCTCCAT
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| CDS seq | ATGGAGCCTTTCAAAGGAAACTTCTCAAACCTCCTCAACCAAGGTTCCTCAAGCCAAGCAACAAATAGTGATGCCCAAAACTCCCCTTCTACCCAATTTCCCACAAGTTATCCTCAAAACTTCAGACCTAGTTTTCTCCAAAATTTCCATCCTTTTGGTCCTCCAAGCAACTACCAGCCATATCGACACCCTCCAATCTTTCAAGGTGCTCAGCAACAAGATTATTATGGGCAACCTACTCCAGGAAGCTTGGAAGGTTTTCAACTTCAAGAAAATCTGGTGCACTCATCTAACCAAGCATTTGGATTTGCAGCCAATAGATCACAGTTTGGTATGCAATATAGTACTTCAATTGGGGCTGCAGCCAACACTTCTTCTCATGGATCAGCTTCTCCATGTCATACAAGACATAATGAGAAAGAAGTAGTTGAGGTTGAAGAGGCAAGTGATAGCAGTGAAGAAGGAAGAAGAGGGACACGCATCAATTGGACTGAAGATGACAATATACGACTAATGAGTTCTTGGTTGAACAATTCAGTTGATCCCATCAAAGGCAATGACAAGAAATCAGAACAATATTGGAAGGCTGTAGCTAGAGAGTTCAACAGCAATATGCCTAGCAATGGGAACAAAAGGAACCCCAAGCAATGCAGAACACATTGGGACAATGTCAAGAGAGATGTCACTAAGTTCTGTGGATTTTATTCTAAAGCTAGAACTACTTTCACAAGTGGGTATTCTGATGATATGATAATGGAGAAAGCCCGTGAATGGTACAAAAAGCATAACAACCAAAAACCTTTCACCTTGGAGTATATGTGGAAAGATCTTAAAGATCAACCTAAATGGCGTAGAGTACTTGAAGAGAGTAGCCATAATAAGAGGAACAAGATTTCTGAATCAGGAGCATATACTTCATCGTCGAACCAAGACACAGAGGAGGAAACAGAGCGCAAAGAGAAGCGCCCTGAGGGGCAGAAAGCAGCAAAACAGAGGCAAAAAGGAAAAGGTGCACCATCACCTTTAGGGGATAAGCCAAATCAAAATATGGTTCTCTTTCATAAAGCTATTACAACTAAAGCAGCAGCATTGCTAAAGGCAGCAGAAGCAACACTGATTGGAGCAGAAGCTAAAAAAGAGAAGGCAATTGCAAAAAAAGAGAAGGCAAGGGCAGAAAAATACCAAATGTATTTAAAACTGATGGAGAAGGATACATCAACCTTCAGTGAAGCAAAACTGAAGAGACATGAAAATGTGTTGGACCAATTAGCTAGAGAACTTGCTAAGGAATAA
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| Protein seq | MEPFKGNFSNLLNQGSSSQATNSDAQNSPSTQFPTSYPQNFRPSFLQNFHPFGPPSNYQPYRHPPIFQGAQQQDYYGQPTPGSLEGFQLQENLVHSSNQAFGFAANRSQFGMQYSTSIGAAANTSSHGSASPCHTRHNEKEVVEVEEASDSSEEGRRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQKPFTLEYMWKDLKDQPKWRRVLEESSHNKRNKISESGAYTSSSNQDTEEETERKEKRPEGQKAAKQRQKGKGAPSPLGDKPNQNMVLFHKAITTKAAALLKAAEATLIGAEAKKEKAIAKKEKARAEKYQMYLKLMEKDTSTFSEAKLKRHENVLDQLARELAKE |
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| Function | Glutathione S-transferase T3 [UniProtKB/Swiss-Prot:Q9FHE1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0122200 | OsMH63_07T0122200.1 | Chr07 | 7255226 | 7256518 | - | maker | ||
| CDS seq | ATGGAGCCTTTCAAAGGAAACTTCTCAAACCTCCTCAACCAAGGTTCCTCAAGCCAAGCAACAAATAGTGATGCCCAAAACTCCCCTTCTACCCAATTTCCCACAAGTTATCCTCAAAACTTCAGACCTAGTTTTCTCCAAAATTTCCATCCTTTTGGTCCTCCAAGCAACTACCAGCCATATCGACACCCTCCAATCTTTCAAGGTGCTCAGCAACAAGATTATTATGGGCAACCTACTCCAGGAAGCTTGGAAGGTTTTCAACTTCAAGAAAATCTGGTGCACTCATCTAACCAAGCATTTGGATTTGCAGCCAATAGATCACAGTTTGGTATGCAATATAGTACTTCAATTGGGGCTGCAGCCAACACTTCTTCTCATGGATCAGCTTCTCCATGTCATACAAGACATAATGAGAAAGAAGTAGTTGAGGTTGAAGAGGCAAGTGATAGCAGTGAAGAAGGAAGAAGAGGGACACGCATCAATTGGACTGAAGATGACAATATACGACTAATGAGTTCTTGGTTGAACAATTCAGTTGATCCCATCAAAGGCAATGACAAGAAATCAGAACAATATTGGAAGGCTGTAGCTAGAGAGTTCAACAGCAATATGCCTAGCAATGGGAACAAAAGGAACCCCAAGCAATGCAGAACACATTGGGACAATGTCAAGAGAGATGTCACTAAGTTCTGTGGATTTTATTCTAAAGCTAGAACTACTTTCACAAGTGGGTATTCTGATGATATGATAATGGAGAAAGCCCGTGAATGGTACAAAAAGCATAACAACCAAAAACCTTTCACCTTGGAGTATATGTGGAAAGATCTTAAAGATCAACCTAAATGGCGTAGAGTACTTGAAGAGAGTAGCCATAATAAGAGGAACAAGATTTCTGAATCAGGAGCATATACTTCATCGTCGAACCAAGACACAGAGGAGGAAACAGAGCGCAAAGAGAAGCGCCCTGAGGGGCAGAAAGCAGCAAAACAGAGGCAAAAAGGAAAAGGTGCACCATCACCTTTAGGGGATAAGCCAAATCAAAATATGGTTCTCTTTCATAAAGCTATTACAACTAAAGCAGCAGCATTGCTAAAGGCAGCAGAAGCAACACTGATTGGAGCAGAAGCTAAAAAAGAGAAGGCAATTGCAAAAAAAGAGAAGGCAAGGGCAGAAAAATACCAAATGTATTTAAAACTGATGGAGAAGGATACATCAACCTTCAGTGAAGCAAAACTGAAGAGACATGAAAATGTGTTGGACCAATTAGCTAGAGAACTTGCTAAGGAATAA
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| Protein seq | MEPFKGNFSNLLNQGSSSQATNSDAQNSPSTQFPTSYPQNFRPSFLQNFHPFGPPSNYQPYRHPPIFQGAQQQDYYGQPTPGSLEGFQLQENLVHSSNQAFGFAANRSQFGMQYSTSIGAAANTSSHGSASPCHTRHNEKEVVEVEEASDSSEEGRRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQKPFTLEYMWKDLKDQPKWRRVLEESSHNKRNKISESGAYTSSSNQDTEEETERKEKRPEGQKAAKQRQKGKGAPSPLGDKPNQNMVLFHKAITTKAAALLKAAEATLIGAEAKKEKAIAKKEKARAEKYQMYLKLMEKDTSTFSEAKLKRHENVLDQLARELAKE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0078415 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g38780 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0015120 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0020360 | SBH | 0.252479 | 0.294502 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0010400 | SBH | 0.0 | 0.0 | 1.305991 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0556600 | RBH | 0.002641 | 0.030961 | 0.0085305 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0017110 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0587000 | SBH | 3.706924 | 3.5073945 | 18.353083 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0038000 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0018580 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0010640 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0016930 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0016800 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G010550 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0010480 | SBH | 0.000000 | 0.000000 | 0.000000 |
