Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0007000 | OGI:07001090 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:519728-522788 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GAAAGAAAAGGACTTGTTGCACCAAACCTGGATCTCTTACTCATATGAGATGGTGATGGGTCGTGGCGTGGGTCCATATTGCGCGTTAGATTCTGGCGTGATCTGAGCCATGAGTCCATCCATGGCCCCAACCTAGCTAGTGCGTGTTGTGTTCTTTAGTTGGTCGCCACACGGGCAATGCCAAAGTAAAGCCAGGCATGATGCCGGAGGAGGAGGAGGAGAATATGAGATGAGATGAACACTTAAAAGGAGAAAGAAAGAAGGAGGAGAATATACAAAGGGAAGTTGTTCCCATCTGATCTGATCCATCATCCATCTCAATGTGCAGCAGCAGCAGAAGCAGTGTATTATTCTGTTGTTAGGAGAGAAGTTCAGAGAAGTAGTAGTAGTCCCTATAAGAAAGGGGAAAGAAAAAAAAAAGAAGAAACCCTATCCAAACAAAAACAAAGGGAAGAGAGAAGAAAGTTGGAGACTTGGAGGAGGAACCCTCCACCACCAGCAAAGCCAATAGAGGGATCATCCGCCGTAATCTATCTAGCCATCAATCCATCTCCCTCTCCTCCTCTGCTCTCCATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGTAACCTCACTATCCCGCTTTGGTCGATTTCGGTAGGGTTTGTGCGCTCCTCAACAATCTCGCCCCGCGATTAGGGTATTTGCGATAAATTACTGCGGAAAATCTGTTTCTTGGGGGTTGGACTACCCCGGACGCGGTGCCAAATGAAGCGCTGGGATTATCACGATGCGCTGCCGATTCTTCAGCCGAGTTCTTCGGGGATCGTATTAACTGATTTCTTTTGTTTGAAATTTCTTGTTAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGGTCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAAGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTGAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCTACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTGCAGGTGAGCAAGAAACCTCTCTTTTTTCTTCAAATGTATGCCTTATCTCTACATTGTACTGATTAGCTTTCTTGCATTTGTTAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCAAGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTATTGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTCAAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACACAGTGTATGGGCAGCTACTGTTGTCATGGCCTGCAGTGAACTATTGCAATGAATTATTGGACAAATATCTGGCGTTTGGCACTTGTACCATGGAGGGAGCTATGGTTGGCTTTGGACCGACACTACTATCATACTAGTAGTTTGGGTGTCATGAGCTGACATGAAAGTTCCTGACGATTCCAATTTAGTACATGAAATTACTTTGTGATATCCTGAAATCCCATTGTTCTGTCTAACAACTGAGTATGTT
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| CDS seq | ATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGGTCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAAGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTGAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCTACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTGCAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGA
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| Protein seq | MKSKSSRKAADEDEAKSKKLRSSRGKQRPKQRRRGRCSSTSSRSESPPRKRSKKLKVSDKKSTKNKGRRRHHSLSPSPSPSSSSVSYSTRSSSGGGGGASERSVSPPRRSRSRDVRKKKKERGRDSKRVRRSRRSTSYSTSGESNSSSRSRSRSNNSKSRNRKSGGNKDHASRNKIVQDYDNGHAHRAENVKSVEIADRDEKAMADTSKGSSIEISHSIIDHEKNESVEKMESAPTKDADETQDILPAGSGSPDAQDLELILRQKALENFRKFRGAALMAGKPQTNGTGKEVVTDSPKSSDTKIAEASSVDKPFQRQRSGLSVNCSVGSPRLEDFGNHITPRKQESSAGKSVGVESPGTFEAGSTSGRTEQKGSSLEPTRSNSQIRLQDGRSSSSIMHRLGSPPRSSASVIRRLGSSAGVNYVNGNPRVRSVVSIPTKEGLDSGTSITTPSACDNSPPVENISEVRHPPIDTNKIEGTKGDERNSGEASAPNVSTLSTGEVKDQPGTEVKDGSQFEKKTFSRMHEGETVQVSYKVYIPKKSPALARRKLQR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0007000 | OsMH63_07T0007000.1 | Chr07 | 519728 | 522788 | + | maker | ||
| CDS seq | ATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGGTCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAAGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTGAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCTACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTGCAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGA
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| Protein seq | MKSKSSRKAADEDEAKSKKLRSSRGKQRPKQRRRGRCSSTSSRSESPPRKRSKKLKVSDKKSTKNKGRRRHHSLSPSPSPSSSSVSYSTRSSSGGGGGASERSVSPPRRSRSRDVRKKKKERGRDSKRVRRSRRSTSYSTSGESNSSSRSRSRSNNSKSRNRKSGGNKDHASRNKIVQDYDNGHAHRAENVKSVEIADRDEKAMADTSKGSSIEISHSIIDHEKNESVEKMESAPTKDADETQDILPAGSGSPDAQDLELILRQKALENFRKFRGAALMAGKPQTNGTGKEVVTDSPKSSDTKIAEASSVDKPFQRQRSGLSVNCSVGSPRLEDFGNHITPRKQESSAGKSVGVESPGTFEAGSTSGRTEQKGSSLEPTRSNSQIRLQDGRSSSSIMHRLGSPPRSSASVIRRLGSSAGVNYVNGNPRVRSVVSIPTKEGLDSGTSITTPSACDNSPPVENISEVRHPPIDTNKIEGTKGDERNSGEASAPNVSTLSTGEVKDQPGTEVKDGSQFEKKTFSRMHEGETVQVSYKVYIPKKSPALARRKLQR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 7.5497315 | 10.7794895 | 17.17813 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0107900 | RBH | 0.847754 | 1.059990 | 3.977400 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g01720 | RBH | 0.533592 | 0.619355 | 1.057445 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0107900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0000490 | RBH | 0.265764 | 11.061124 | 3.065799 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0000540 | RBH | 0.085125 | 0.395479 | 0.302581 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0000470 | RBH | 0.805605 | 1.512653 | 5.278978 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0000470 | RBH | 0.165445 | 0.085371 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0000490 | RBH | 2.017027 | 6.287436 | 7.842426 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0000480 | RBH | 0.186278 | 0.275313 | 1.042029 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0005200 | RBH | 3.6301755 | 5.0874595 | 9.688477 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0000500 | RBH | 0.136143 | 0.193959 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0000510 | RBH | 0.224890 | 2.443970 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0000520 | RBH | 2.849826 | 6.217840 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0037640 | RBH | 0.388322 | 0.0 | 0.552828 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0000510 | RBH | 0.209329 | 2.592500 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G000520 | RBH | 0.204629 | 1.114532 | 1.296076 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0000520 | RBH | 0.997154 | 5.910871 | 5.730480 |
