Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0360400 | OGI:06026330 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:23631602-23633945 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAATTCATGGCAGATGCATGTGTGCGATACTTCTCTTTTATGTGCAGTAGCTCCTTCATAGCATCACTAATCTGCATGCGATCTGCTGGTTGTTCCTTGGAACAGAGAATTCCAATTTTCAGAATTGAAGTGATGGATGCTATTGTTATTCCTGCGATGCTATCAGGAATGGGAGTCTTTTGTTCCCCGTCCTCAGTTGCTGATAGCAAGTCTTGGTCCACCACGCAGGTGACTTGCTCTCTCAGTGCTAGCTCCACATATTTATGCAGGTTAAAATCATGCGCAAATTCATCATCTGTTGGTCTTTTTCCAGTGAACATCTCCAACAGCAGTATTCCATAGCTATAGGTGTCACCAAGGGTTGAGACTTCATTTCCTTGGCCATACTCTGAAATAGATGTAGTGGAGCAACTTATATTTCCTTATATGTAATAGAAGAGTCGGAGCACATGTTTCAATCTATTCAAGGTGGCAGCAACTTGTGAAAACCGTTTCCAGCTTCTAAAAACAATAACTTCTGACATAAATTTCTAGCAAAGAAGCAAGTTTTGCATAAGGCAAACAATCTGTATAAGGAATTTCACTTACGTAACCATTTGTACGAACAACTATTCATCTAGAAGACAAAATGATTGCGAAATGGGAATACTTTCATGACATCACCTTTTAAAAAGCTTTGAGTCTTAATTCAAAGTAATTACTATTAGATGAGGGAAACACGCACTACAGTATCAAATGCAAGATTTTCTCCCATATAACTTGATCAATATTTACATCTAACACTTGACATAGTTTATTTTTATGCTAAACAATACAATTCTGTCCACACCTTCTATTCACAATTTGTTTTAAGATTCATAATTAATTTTTTTAAAGAGATTTAACAAATAACTAACTTTTATTTTAGAGAATAGAAGCATGACTGACTGAAACGTCAGTCTTATGAGGAACTTGCTAGCATCAAACGGAAAAAAAAGTTATTAGAGGCAAACCTGGCGCAGCATATCCAACCGTTCCTCTTCTTGTTGCCCAGCCACTTGATATCACTGGGAGGCTTGTATCATCTTCATGCAAGAATCTTGCAAGTCCAAAGTCACCTAGGTGGGCAACTTTTTCATTGTCGAGGAGAATATTACTTGGCTTCAGATCACAATGAACTACTGAAACTGGCTTATGAAAATGAAGATATTCAAGTGCACAAGCTACATCTATGGCAATGTCTATCCTTTGTGAAAGATTGAGCACCCTATGGTTCCCTTCTTCTAACAGATGATGGTGTAGCCATTTGTCTAGATCTCCATTTGGCATAAACTCAAATACAAGAGCTTTGAAGTCAACACCACTGGAATCAATACTTGAGCAAACTATCAATATTTTCACAAGATTTCGATGCCTAATGCATCTTAAAGTTTCGCATTCCGCAAGAAAGCTTTGAGATGCTCCCCTCTGTTGGAGTCTGAGCACTTTCACAGCAACACTCACCTCTTGGCCATCATTCATAATTGTTCCTCTATAGACTGAACCGAAGCTTCCTGTTCCTAGGAGGTTTTCAGAAGCAAAACCACTTGTTGCTTTCACTAAGTCAGCATAGGAAACCCTCATACGTGGGCCATTGGGGAGTGATAGAATTTGTCTGATATTTCTTACGTGGTCCTTCGACTTCCATATTATGAACAGTGAACATGCCAAGATAATGCACAAGGTTATGCTTCCTAATGAGATTGCCAAGACAAGTTTGTGAGACCACTTTTTTGATGTATGGTTTATACAAGGTGGCAGATTCAATTGGGGGATACCTCCACATAAGCCACTGTTCCCCTCAATAAAAAATGTATTTGCATTCAGAAATATTCCAAGTTTTGGAACTTGACCCTCAAAATTGTTGAATGAGATGTTTAGGTTGGTAAGCCCCTTCATTCTTCCAATGAACTCTGGGATCTGCCCAGACAAGTTGTTTCTTGAAAGATCAAGAACTTGTAATCCTTTCAATTGTTCCATGGATGATGGAATTGTTCCTTCAAAGAGATTTTCTTGCATACTGAGATACTGCAAGCTACTACACTTACCAAGGGAGGTAGGAATTGGCCCGGATATCCTATTTCCAGATACATCAAGTCTAGCAAGGTTAATGAGGTCACCAACCTCTGGTGGCAATATACCAGTTAACTTATTGCCTTGGAAGGAAACAAAGTCAGATAATGTGGAGATGAGAAAAATTTCCTTTGGTATTGGACCAACCAGCTGATTATTTGCTAAGCTGAGAATTTCCAAAGGGCAGCTACCAAGACTTGAAGGTACAGGCCTGTTGAGCATATTTTCGTCCAGGACGATTCTATTCAGCAT
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| CDS seq | ATGCTGAATAGAATCGTCCTGGACGAAAATATGCTCAACAGGCCTGTACCTTCAAGTCTTGGTAGCTGCCCTTTGGAAATTCTCAGCTTAGCAAATAATCAGCTGGTTGGTCCAATACCAAAGGAAATTTTTCTCATCTCCACATTATCTGACTTTGTTTCCTTCCAAGGCAATAAGTTAACTGGTATATTGCCACCAGAGGTTGGTGACCTCATTAACCTTGCTAGACTTGATGTATCTGGAAATAGGATATCCGGGCCAATTCCTACCTCCCTTGGTAAGTGTAGTAGCTTGCAGTATCTCAGTATGCAAGAAAATCTCTTTGAAGGAACAATTCCATCATCCATGGAACAATTGAAAGGATTACAAGTTCTTGATCTTTCAAGAAACAACTTGTCTGGGCAGATCCCAGAGTTCATTGGAAGAATGAAGGGGCTTACCAACCTAAACATCTCATTCAACAATTTTGAGGGTCAAGTTCCAAAACTTGGAATATTTCTGAATGCAAATACATTTTTTATTGAGGGGAACAGTGGCTTATGTGGAGGTATCCCCCAATTGAATCTGCCACCTTGTATAAACCATACATCAAAAAAGTGGTCTCACAAACTTGTCTTGGCAATCTCATTAGGAAGCATAACCTTGTGCATTATCTTGGCATGTTCACTGTTCATAATATGGAAGTCGAAGGACCACGTAAGAAATATCAGACAAATTCTATCACTCCCCAATGGCCCACGTATGAGGGTTTCCTATGCTGACTTAGTGAAAGCAACAAGTGGTTTTGCTTCTGAAAACCTCCTAGGAACAGGAAGCTTCGGTTCAGTCTATAGAGGAACAATTATGAATGATGGCCAAGAGGTGAGTGTTGCTGTGAAAGTGCTCAGACTCCAACAGAGGGGAGCATCTCAAAGCTTTCTTGCGGAATGCGAAACTTTAAGATGCATTAGGCATCGAAATCTTGTGAAAATATTGATAGTTTGCTCAAGTATTGATTCCAGTGGTGTTGACTTCAAAGCTCTTGTATTTGAGTTTATGCCAAATGGAGATCTAGACAAATGGCTACACCATCATCTGTTAGAAGAAGGGAACCATAGGGTGCTCAATCTTTCACAAAGGATAGACATTGCCATAGATGTAGCTTGTGCACTTGAATATCTTCATTTTCATAAGCCAGTTTCAGTAGTTCATTGTGATCTGAAGCCAAGTAATATTCTCCTCGACAATGAAAAAGTTGCCCACCTAGGTGACTTTGGACTTGCAAGATTCTTGCATGAAGATGATACAAGCCTCCCAGTGATATCAAGTGGCTGGGCAACAAGAAGAGGAACGGTTGGATATGCTGCGCCAGAGTATGGCCAAGGAAATGAAGTCTCAACCCTTGGTGACACCTATAGCTATGGAATACTGCTGTTGGAGATGTTCACTGGAAAAAGACCAACAGATGATGAATTTGCGCATGATTTTAACCTGCATAAATATGTGGAGCTAGCACTGAGAGAGCAAGTCACCTGCGTGGTGGACCAAGACTTGCTATCAGCAACTGAGGACGGGGAACAAAAGACTCCCATTCCTGATAGCATCGCAGGAATAACAATAGCATCCATCACTTCAATTCTGAAAATTGGAATTCTCTGTTCCAAGGAACAACCAGCAGATCGCATGCAGATTAGTGATGCTATGAAGGAGCTACTGCACATAAAAGAGAAGTATCGCACACATGCATCTGCCATGAATTGA
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| Protein seq | MLNRIVLDENMLNRPVPSSLGSCPLEILSLANNQLVGPIPKEIFLISTLSDFVSFQGNKLTGILPPEVGDLINLARLDVSGNRISGPIPTSLGKCSSLQYLSMQENLFEGTIPSSMEQLKGLQVLDLSRNNLSGQIPEFIGRMKGLTNLNISFNNFEGQVPKLGIFLNANTFFIEGNSGLCGGIPQLNLPPCINHTSKKWSHKLVLAISLGSITLCIILACSLFIIWKSKDHVRNIRQILSLPNGPRMRVSYADLVKATSGFASENLLGTGSFGSVYRGTIMNDGQEVSVAVKVLRLQQRGASQSFLAECETLRCIRHRNLVKILIVCSSIDSSGVDFKALVFEFMPNGDLDKWLHHHLLEEGNHRVLNLSQRIDIAIDVACALEYLHFHKPVSVVHCDLKPSNILLDNEKVAHLGDFGLARFLHEDDTSLPVISSGWATRRGTVGYAAPEYGQGNEVSTLGDTYSYGILLLEMFTGKRPTDDEFAHDFNLHKYVELALREQVTCVVDQDLLSATEDGEQKTPIPDSIAGITIASITSILKIGILCSKEQPADRMQISDAMKELLHIKEKYRTHASAMN |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q2R2D5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0360400 | OsMH63_06T0360400.1 | Chr06 | 23631602 | 23633945 | - | maker | ||
| CDS seq | ATGCTGAATAGAATCGTCCTGGACGAAAATATGCTCAACAGGCCTGTACCTTCAAGTCTTGGTAGCTGCCCTTTGGAAATTCTCAGCTTAGCAAATAATCAGCTGGTTGGTCCAATACCAAAGGAAATTTTTCTCATCTCCACATTATCTGACTTTGTTTCCTTCCAAGGCAATAAGTTAACTGGTATATTGCCACCAGAGGTTGGTGACCTCATTAACCTTGCTAGACTTGATGTATCTGGAAATAGGATATCCGGGCCAATTCCTACCTCCCTTGGTAAGTGTAGTAGCTTGCAGTATCTCAGTATGCAAGAAAATCTCTTTGAAGGAACAATTCCATCATCCATGGAACAATTGAAAGGATTACAAGTTCTTGATCTTTCAAGAAACAACTTGTCTGGGCAGATCCCAGAGTTCATTGGAAGAATGAAGGGGCTTACCAACCTAAACATCTCATTCAACAATTTTGAGGGTCAAGTTCCAAAACTTGGAATATTTCTGAATGCAAATACATTTTTTATTGAGGGGAACAGTGGCTTATGTGGAGGTATCCCCCAATTGAATCTGCCACCTTGTATAAACCATACATCAAAAAAGTGGTCTCACAAACTTGTCTTGGCAATCTCATTAGGAAGCATAACCTTGTGCATTATCTTGGCATGTTCACTGTTCATAATATGGAAGTCGAAGGACCACGTAAGAAATATCAGACAAATTCTATCACTCCCCAATGGCCCACGTATGAGGGTTTCCTATGCTGACTTAGTGAAAGCAACAAGTGGTTTTGCTTCTGAAAACCTCCTAGGAACAGGAAGCTTCGGTTCAGTCTATAGAGGAACAATTATGAATGATGGCCAAGAGGTGAGTGTTGCTGTGAAAGTGCTCAGACTCCAACAGAGGGGAGCATCTCAAAGCTTTCTTGCGGAATGCGAAACTTTAAGATGCATTAGGCATCGAAATCTTGTGAAAATATTGATAGTTTGCTCAAGTATTGATTCCAGTGGTGTTGACTTCAAAGCTCTTGTATTTGAGTTTATGCCAAATGGAGATCTAGACAAATGGCTACACCATCATCTGTTAGAAGAAGGGAACCATAGGGTGCTCAATCTTTCACAAAGGATAGACATTGCCATAGATGTAGCTTGTGCACTTGAATATCTTCATTTTCATAAGCCAGTTTCAGTAGTTCATTGTGATCTGAAGCCAAGTAATATTCTCCTCGACAATGAAAAAGTTGCCCACCTAGGTGACTTTGGACTTGCAAGATTCTTGCATGAAGATGATACAAGCCTCCCAGTGATATCAAGTGGCTGGGCAACAAGAAGAGGAACGGTTGGATATGCTGCGCCAGAGTATGGCCAAGGAAATGAAGTCTCAACCCTTGGTGACACCTATAGCTATGGAATACTGCTGTTGGAGATGTTCACTGGAAAAAGACCAACAGATGATGAATTTGCGCATGATTTTAACCTGCATAAATATGTGGAGCTAGCACTGAGAGAGCAAGTCACCTGCGTGGTGGACCAAGACTTGCTATCAGCAACTGAGGACGGGGAACAAAAGACTCCCATTCCTGATAGCATCGCAGGAATAACAATAGCATCCATCACTTCAATTCTGAAAATTGGAATTCTCTGTTCCAAGGAACAACCAGCAGATCGCATGCAGATTAGTGATGCTATGAAGGAGCTACTGCACATAAAAGAGAAGTATCGCACACATGCATCTGCCATGAATTGA
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| Protein seq | MLNRIVLDENMLNRPVPSSLGSCPLEILSLANNQLVGPIPKEIFLISTLSDFVSFQGNKLTGILPPEVGDLINLARLDVSGNRISGPIPTSLGKCSSLQYLSMQENLFEGTIPSSMEQLKGLQVLDLSRNNLSGQIPEFIGRMKGLTNLNISFNNFEGQVPKLGIFLNANTFFIEGNSGLCGGIPQLNLPPCINHTSKKWSHKLVLAISLGSITLCIILACSLFIIWKSKDHVRNIRQILSLPNGPRMRVSYADLVKATSGFASENLLGTGSFGSVYRGTIMNDGQEVSVAVKVLRLQQRGASQSFLAECETLRCIRHRNLVKILIVCSSIDSSGVDFKALVFEFMPNGDLDKWLHHHLLEEGNHRVLNLSQRIDIAIDVACALEYLHFHKPVSVVHCDLKPSNILLDNEKVAHLGDFGLARFLHEDDTSLPVISSGWATRRGTVGYAAPEYGQGNEVSTLGDTYSYGILLLEMFTGKRPTDDEFAHDFNLHKYVELALREQVTCVVDQDLLSATEDGEQKTPIPDSIAGITIASITSILKIGILCSKEQPADRMQISDAMKELLHIKEKYRTHASAMN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.046651 | 0.0251885 | 0.1826145 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0602500 | SBH | 0.537959 | 0.727671 | 4.276122 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g46330 | SBH | 0.220427 | 0.696335 | 0.423355 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0602500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0020640 | RBH | 0.280769 | 0.718952 | 3.377432 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0020430 | SBH | 0.055373 | 1.473826 | 1.106037 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0020730 | SBH | 0.119523 | 0.974873 | 2.135322 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0020290 | RBH | 0.061797 | 0.085191 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0020720 | RBH | 0.000000 | 4.941632 | 5.614280 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0061400 | SBH | 4.575236 | 3.059625 | 1.525088 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0020130 | RBH | 0.0 | 0.000000 | 0.375285 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0334100 | RBH | 0.327212 | 1.6015635 | 2.759615 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0020580 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0020620 | SBH | 0.052414 | 4.054914 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0020230 | SBH | 0.0 | 6.350543 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0020960 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0020380 | RBH | 0.0 | 1.192764 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G020290 | SBH | 0.0 | 0.0 | 0.458848 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0020530 | RBH | 0.0 | 2.463484 | 1.300333 |
