Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os06g0602500 | OGI:06067850 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr06:23812382-23815104 | ||||||||
| Gene Symbol | NRFG6, OsNRFG6, SDRLK-38 | ||||||||||
| DNA seq | GATGCTAGAGCACATATTACCTCATATAATTTTAGTTTCTTACAGTACAAGTTACAAATATGCTCCCTCCAGTCAATATTACTTGCCATTTCCGACAAGCAAATTGCACTGAGCGCAGGTCAATTCAGCTGTCCCAAAAGACATGTATTTCCGTCTGGAGGGAGTATTACATTGATGTGCCAAATGGTTCTACATTTTGATGCAGGACAGGTAAGTTGCTATGTAATGATATTTTCTTCATCAACTGATAGAAGCATCTGCGCTACATTCTCCATGGTGGGTCTTTTGCTTCTATCTTCTTCTATGCATGAAACAGCCAACTTGATCATTGTTCTTGCTTGCAAGTAGTTGAACTGGCCATTCAATCTCGAGTCAATGAAGTTAGTGATCCATGACCGTTCGCTATCCTCCTGCAACTTCACATTCTCTGCCAGCATCCTAACATCCCGCCGAAGGACCTTTTCAACCTCATCATCTTCATCCTCAGTTTTTGCCCATTCTGAAACACGACTTCCCTTCAATAATTCTAGAAGGACCACTCCGAAGCTGTAGACATCAACCTTTGCTGTTATTGGGAGACTAGAAACCCACTCAGGAGCTATATAACCTCTAGTTCCATGGATACGTGATACATTTTTATTGGATCCCCCTCTGTTCAGGAGTTTTGCAAGGCCAAAGTCGGTGATCTTTGGCTCCAAGTTATCATCCAACAGTATGTTCTCGGGCTTCACGTCGCAATGGATAACCCACTCTAAGCATTCGTGATGAAGATATGCTAAACCTTTGGCCACCCCAAGAGCAATCTTAAATCTTTGCTTCCATTCAAGTAAGGTCTGGGAGGCCTCACTTCCAAATAACTTCTTGTCCAACGAACCATTCTCCACATATTCGGAAACCAACATCCTGTGTGGACCATCAGAACAGTATCCCCATACCCTCACTAGGTTCATATGGTAAATTTTACTGATCACACTCAACTCATGCTGGAATTCTTCTTCACATTGGCTTATGTCTGCCAACTTTTTCACGGCTACTGCCCTCTCGTCTTTCAAGATTCCCTTGTACACTACACCAGATGCTCCCCTGCCAAGCTCTTCCTTAAATTTTCTAGTAGCTCTCTGCAACTCCTTGTAAGTGTATCTGCGGAAATGGCTTGTTATCATTTCATAGCCGGATTCAGCTGGCCATACTCCTGTTAATTGCCTGCCCTCCATTCTCAAAATAAACCACCATCCTAATGCAATCAAAATTACCTCGATGAGAAATATTGCTGATAAGAATCCGTAGAAGTAGAAAAATCTTGATTCACTTTGACCACTTCTTGAGATATCTGAGAAATTTGCAATGGAATATTGGTTCTCTGCGCTACAATTAGGGCCATATTGACGACCAGAAGGCTGTGAGCGGGGAATGGAGGACTCGCGGACTTTTAAAGCCTCAGGAAGCTTGAGATAGGTTGAACCAGGCAATGATTGGCTTGTTACACCACCAACAAGTGAAGATTTTGGATAGCAGTTACCATTTCCTTGCCAGTATGAGAAACCCTTGCAGCTGCAATCACTCATGCATATGTTCTTGCAAGTACTAAGCGAAACCTGCTGATGTGTACTTTGATCATACCCTAAGAATTCAGTAGTGGGTAGCTTCACAAATCTTATCTTCTGCTTTCTGTCACAGCTGATTGTAAACTTTGGCTTGCATCCTTTACTCAAGTCACTTGGGTCATTGATCTCGTGTCCAGGGGCACATACACATGCAGGCTTAGGTGTATACACGCATATTCCGTTCATGCCGCACAAACCACGTACAAAGCAGAGGTTAGTAAATGCCATCCATGTGACTAGCCAAGTTCCGTCTGTCTTGTTGAGACTGTATAACCTAAGATTACCATCATAATCTAGTGTTAATCTCCTCATAATCCCAGGACCCCAATCAGCAGCCATAAAGCTTGCATTATCACTCCCAAGGAAATGCCCCGAGCTATCAAGAACTCCAAATGTTGTGGTATTAAATGATATTCTTTTCTTTGCCCACATGTTTATGAATGGATTTGGCCAATAGATAAAAGAGATATCCTTCTCGTCATCAAACAATGTAAGCAAATGTTGATCATCAAAATGAAAGCTGTAGTGGCCAGGAACAAGTAATCTATTACTACTAGTACTAGATACCAGTTTTATAGTACCATTAATAATCTGATTGGGTAGCAAAGTATCAGTTGGAGAAGCAAAGCTTTGCCATAGAATTGTATCACCTTGGCCTTTCACGATGAGGTTTCCTCTCTCCAATAACCGAGCCTCTTGGACATTTGAAGAGCTCACATTGTTTGTCCACACAATCTGACCACCGTAGTCTTGTAAAACCATATTTCCGTCGATGTTTAACTTGATCTTGGATCCCCAGGTGTACACAGGACGACCAAGATTTGCACTCCACACAACTGTCTTTTCAGCTGAGTTGGAGAACCAAACTGCGAAGATGGAGGAATTGGGGGAGATGTTGTAGAACCCGCAGGCGAAAGTACCATCTGGTGAGTAGAGCACATCAGAACTGCGCTCTACTGAGAGAGAGGAACCAGGTGAGAGGAAATCACGAGCTGATATCTGCAAAAGAAGATGGATCAAAGTGAGGAGAAACATGAAAGCAGAGTGTGCATCCATGGTTGCCTCCCCTTTCTGAGTTGATCTTTGAAATGATCAGAAATGCATGTTATTGTAGGATCC
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| CDS seq | ATGGATGCACACTCTGCTTTCATGTTTCTCCTCACTTTGATCCATCTTCTTTTGCAGATATCAGCTCGTGATTTCCTCTCACCTGGTTCCTCTCTCTCAGTAGAGCGCAGTTCTGATGTGCTCTACTCACCAGATGGTACTTTCGCCTGCGGGTTCTACAACATCTCCCCCAATTCCTCCATCTTCGCAGTTTGGTTCTCCAACTCAGCTGAAAAGACAGTTGTGTGGAGTGCAAATCTTGGTCGTCCTGTGTACACCTGGGGATCCAAGATCAAGTTAAACATCGACGGAAATATGGTTTTACAAGACTACGGTGGTCAGATTGTGTGGACAAACAATGTGAGCTCTTCAAATGTCCAAGAGGCTCGGTTATTGGAGAGAGGAAACCTCATCGTGAAAGGCCAAGGTGATACAATTCTATGGCAAAGCTTTGCTTCTCCAACTGATACTTTGCTACCCAATCAGATTATTAATGGTACTATAAAACTGGTATCTAGTACTAGTAGTAATAGATTACTTGTTCCTGGCCACTACAGCTTTCATTTTGATGATCAACATTTGCTTACATTGTTTGATGACGAGAAGGATATCTCTTTTATCTATTGGCCAAATCCATTCATAAACATGTGGGCAAAGAAAAGAATATCATTTAATACCACAACATTTGGAGTTCTTGATAGCTCGGGGCATTTCCTTGGGAGTGATAATGCAAGCTTTATGGCTGCTGATTGGGGTCCTGGGATTATGAGGAGATTAACACTAGATTATGATGGTAATCTTAGGTTATACAGTCTCAACAAGACAGACGGAACTTGGCTAGTCACATGGATGGCATTTACTAACCTCTGCTTTGTACGTGGTTTGTGCGGCATGAACGGAATATGCGTGTATACACCTAAGCCTGCATGTGTATGTGCCCCTGGACACGAGATCAATGACCCAAGTGACTTGAGTAAAGGATGCAAGCCAAAGTTTACAATCAGCTGTGACAGAAAGCAGAAGATAAGATTTGTGAAGCTACCCACTACTGAATTCTTAGGGTATGATCAAAGTACACATCAGCAGGTTTCGCTTAGTACTTGCAAGAACATATGCATGAGTGATTGCAGCTGCAAGGGTTTCTCATACTGGCAAGGAAATGGTAACTGCTATCCAAAATCTTCACTTGTTGGTGGTGTAACAAGCCAATCATTGCCTGGTTCAACCTATCTCAAGCTTCCTGAGGCTTTAAAAGTCCGCGAGTCCTCCATTCCCCGCTCACAGCCTTCTGGTCGTCAATATGGCCCTAATTGTAGCGCAGAGAACCAATATTCCATTGCAAATTTCTCAGATATCTCAAGAAGTGGTCAAAGTGAATCAAGATTTTTCTACTTCTACGGATTCTTATCAGCAATATTTCTCATCGAGGTAATTTTGATTGCATTAGGATGGTGGTTTATTTTGAGAATGGAGGGCAGGCAATTAACAGGAGTATGGCCAGCTGAATCCGGCTATGAAATGATAACAAGCCATTTCCGCAGATACACTTACAAGGAGTTGCAGAGAGCTACTAGAAAATTTAAGGAAGAGCTTGGCAGGGGAGCATCTGGTGTAGTGTACAAGGGAATCTTGAAAGACGAGAGGGCAGTAGCCGTGAAAAAGTTGGCAGACATAAGCCAATGTGAAGAAGAATTCCAGCATGAGTTGAGTGTGATCAGTAAAATTTACCATATGAACCTAGTGAGGGTATGGGGATACTGTTCTGATGGTCCACACAGGATGTTGGTTTCCGAATATGTGGAGAATGGTTCGTTGGACAAGAAGTTATTTGGAAGTGAGGCCTCCCAGACCTTACTTGAATGGAAGCAAAGATTTAAGATTGCTCTTGGGGTGGCCAAAGGTTTAGCATATCTTCATCACGAATGCTTAGAGTGGGTTATCCATTGCGACGTGAAGCCCGAGAACATACTGTTGGATGATAACTTGGAGCCAAAGATCACCGACTTTGGCCTTGCAAAACTCCTGAACAGAGGGGGATCCAATAAAAATGTATCACGTATCCATGGAACTAGAGGTTATATAGCTCCTGAGTGGGTTTCTAGTCTCCCAATAACAGCAAAGGTTGATGTCTACAGCTTCGGAGTGGTCCTTCTAGAATTATTGAAGGGAAGTCGTGTTTCAGAATGGGCAAAAACTGAGGATGAAGATGATGAGGTTGAAAAGGTCCTTCGGCGGGATGTTAGGATGCTGGCAGAGAATGTGAAGTTGCAGGAGGATAGCGAACGGTCATGGATCACTAACTTCATTGACTCGAGATTGAATGGCCAGTTCAACTACTTGCAAGCAAGAACAATGATCAAGTTGGCTGTTTCATGCATAGAAGAAGATAGAAGCAAAAGACCCACCATGGAGAATGTAGCGCAGATGCTTCTATCAGTTGATGAAGAAAATATCATTACATAG
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| Protein seq | MDAHSAFMFLLTLIHLLLQISARDFLSPGSSLSVERSSDVLYSPDGTFACGFYNISPNSSIFAVWFSNSAEKTVVWSANLGRPVYTWGSKIKLNIDGNMVLQDYGGQIVWTNNVSSSNVQEARLLERGNLIVKGQGDTILWQSFASPTDTLLPNQIINGTIKLVSSTSSNRLLVPGHYSFHFDDQHLLTLFDDEKDISFIYWPNPFINMWAKKRISFNTTTFGVLDSSGHFLGSDNASFMAADWGPGIMRRLTLDYDGNLRLYSLNKTDGTWLVTWMAFTNLCFVRGLCGMNGICVYTPKPACVCAPGHEINDPSDLSKGCKPKFTISCDRKQKIRFVKLPTTEFLGYDQSTHQQVSLSTCKNICMSDCSCKGFSYWQGNGNCYPKSSLVGGVTSQSLPGSTYLKLPEALKVRESSIPRSQPSGRQYGPNCSAENQYSIANFSDISRSGQSESRFFYFYGFLSAIFLIEVILIALGWWFILRMEGRQLTGVWPAESGYEMITSHFRRYTYKELQRATRKFKEELGRGASGVVYKGILKDERAVAVKKLADISQCEEEFQHELSVISKIYHMNLVRVWGYCSDGPHRMLVSEYVENGSLDKKLFGSEASQTLLEWKQRFKIALGVAKGLAYLHHECLEWVIHCDVKPENILLDDNLEPKITDFGLAKLLNRGGSNKNVSRIHGTRGYIAPEWVSSLPITAKVDVYSFGVVLLELLKGSRVSEWAKTEDEDDEVEKVLRRDVRMLAENVKLQEDSERSWITNFIDSRLNGQFNYLQARTMIKLAVSCIEEDRSKRPTMENVAQMLLSVDEENIIT |
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| Function | Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os06g0602500 | Os06t0602500-01 | Chr06 | 23812382 | 23815104 | - | irgsp1_rep | ||
| CDS seq | ATGGATGCACACTCTGCTTTCATGTTTCTCCTCACTTTGATCCATCTTCTTTTGCAGATATCAGCTCGTGATTTCCTCTCACCTGGTTCCTCTCTCTCAGTAGAGCGCAGTTCTGATGTGCTCTACTCACCAGATGGTACTTTCGCCTGCGGGTTCTACAACATCTCCCCCAATTCCTCCATCTTCGCAGTTTGGTTCTCCAACTCAGCTGAAAAGACAGTTGTGTGGAGTGCAAATCTTGGTCGTCCTGTGTACACCTGGGGATCCAAGATCAAGTTAAACATCGACGGAAATATGGTTTTACAAGACTACGGTGGTCAGATTGTGTGGACAAACAATGTGAGCTCTTCAAATGTCCAAGAGGCTCGGTTATTGGAGAGAGGAAACCTCATCGTGAAAGGCCAAGGTGATACAATTCTATGGCAAAGCTTTGCTTCTCCAACTGATACTTTGCTACCCAATCAGATTATTAATGGTACTATAAAACTGGTATCTAGTACTAGTAGTAATAGATTACTTGTTCCTGGCCACTACAGCTTTCATTTTGATGATCAACATTTGCTTACATTGTTTGATGACGAGAAGGATATCTCTTTTATCTATTGGCCAAATCCATTCATAAACATGTGGGCAAAGAAAAGAATATCATTTAATACCACAACATTTGGAGTTCTTGATAGCTCGGGGCATTTCCTTGGGAGTGATAATGCAAGCTTTATGGCTGCTGATTGGGGTCCTGGGATTATGAGGAGATTAACACTAGATTATGATGGTAATCTTAGGTTATACAGTCTCAACAAGACAGACGGAACTTGGCTAGTCACATGGATGGCATTTACTAACCTCTGCTTTGTACGTGGTTTGTGCGGCATGAACGGAATATGCGTGTATACACCTAAGCCTGCATGTGTATGTGCCCCTGGACACGAGATCAATGACCCAAGTGACTTGAGTAAAGGATGCAAGCCAAAGTTTACAATCAGCTGTGACAGAAAGCAGAAGATAAGATTTGTGAAGCTACCCACTACTGAATTCTTAGGGTATGATCAAAGTACACATCAGCAGGTTTCGCTTAGTACTTGCAAGAACATATGCATGAGTGATTGCAGCTGCAAGGGTTTCTCATACTGGCAAGGAAATGGTAACTGCTATCCAAAATCTTCACTTGTTGGTGGTGTAACAAGCCAATCATTGCCTGGTTCAACCTATCTCAAGCTTCCTGAGGCTTTAAAAGTCCGCGAGTCCTCCATTCCCCGCTCACAGCCTTCTGGTCGTCAATATGGCCCTAATTGTAGCGCAGAGAACCAATATTCCATTGCAAATTTCTCAGATATCTCAAGAAGTGGTCAAAGTGAATCAAGATTTTTCTACTTCTACGGATTCTTATCAGCAATATTTCTCATCGAGGTAATTTTGATTGCATTAGGATGGTGGTTTATTTTGAGAATGGAGGGCAGGCAATTAACAGGAGTATGGCCAGCTGAATCCGGCTATGAAATGATAACAAGCCATTTCCGCAGATACACTTACAAGGAGTTGCAGAGAGCTACTAGAAAATTTAAGGAAGAGCTTGGCAGGGGAGCATCTGGTGTAGTGTACAAGGGAATCTTGAAAGACGAGAGGGCAGTAGCCGTGAAAAAGTTGGCAGACATAAGCCAATGTGAAGAAGAATTCCAGCATGAGTTGAGTGTGATCAGTAAAATTTACCATATGAACCTAGTGAGGGTATGGGGATACTGTTCTGATGGTCCACACAGGATGTTGGTTTCCGAATATGTGGAGAATGGTTCGTTGGACAAGAAGTTATTTGGAAGTGAGGCCTCCCAGACCTTACTTGAATGGAAGCAAAGATTTAAGATTGCTCTTGGGGTGGCCAAAGGTTTAGCATATCTTCATCACGAATGCTTAGAGTGGGTTATCCATTGCGACGTGAAGCCCGAGAACATACTGTTGGATGATAACTTGGAGCCAAAGATCACCGACTTTGGCCTTGCAAAACTCCTGAACAGAGGGGGATCCAATAAAAATGTATCACGTATCCATGGAACTAGAGGTTATATAGCTCCTGAGTGGGTTTCTAGTCTCCCAATAACAGCAAAGGTTGATGTCTACAGCTTCGGAGTGGTCCTTCTAGAATTATTGAAGGGAAGTCGTGTTTCAGAATGGGCAAAAACTGAGGATGAAGATGATGAGGTTGAAAAGGTCCTTCGGCGGGATGTTAGGATGCTGGCAGAGAATGTGAAGTTGCAGGAGGATAGCGAACGGTCATGGATCACTAACTTCATTGACTCGAGATTGAATGGCCAGTTCAACTACTTGCAAGCAAGAACAATGATCAAGTTGGCTGTTTCATGCATAGAAGAAGATAGAAGCAAAAGACCCACCATGGAGAATGTAGCGCAGATGCTTCTATCAGTTGATGAAGAAAATATCATTACATAG
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| Protein seq | MDAHSAFMFLLTLIHLLLQISARDFLSPGSSLSVERSSDVLYSPDGTFACGFYNISPNSSIFAVWFSNSAEKTVVWSANLGRPVYTWGSKIKLNIDGNMVLQDYGGQIVWTNNVSSSNVQEARLLERGNLIVKGQGDTILWQSFASPTDTLLPNQIINGTIKLVSSTSSNRLLVPGHYSFHFDDQHLLTLFDDEKDISFIYWPNPFINMWAKKRISFNTTTFGVLDSSGHFLGSDNASFMAADWGPGIMRRLTLDYDGNLRLYSLNKTDGTWLVTWMAFTNLCFVRGLCGMNGICVYTPKPACVCAPGHEINDPSDLSKGCKPKFTISCDRKQKIRFVKLPTTEFLGYDQSTHQQVSLSTCKNICMSDCSCKGFSYWQGNGNCYPKSSLVGGVTSQSLPGSTYLKLPEALKVRESSIPRSQPSGRQYGPNCSAENQYSIANFSDISRSGQSESRFFYFYGFLSAIFLIEVILIALGWWFILRMEGRQLTGVWPAESGYEMITSHFRRYTYKELQRATRKFKEELGRGASGVVYKGILKDERAVAVKKLADISQCEEEFQHELSVISKIYHMNLVRVWGYCSDGPHRMLVSEYVENGSLDKKLFGSEASQTLLEWKQRFKIALGVAKGLAYLHHECLEWVIHCDVKPENILLDDNLEPKITDFGLAKLLNRGGSNKNVSRIHGTRGYIAPEWVSSLPITAKVDVYSFGVVLLELLKGSRVSEWAKTEDEDDEVEKVLRRDVRMLAENVKLQEDSERSWITNFIDSRLNGQFNYLQARTMIKLAVSCIEEDRSKRPTMENVAQMLLSVDEENIIT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0602500 | RBH | 0.537959 | 0.727671 | 4.276122 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g40030 | RBH | 0.352909 | 0.474774 | 1.067817 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0021610 | RBH | 0.042675 | 2.886834 | 2.746127 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0021460 | RBH | 0.045420 | 0.380220 | 2.226406 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0021560 | RBH | 0.149981 | 0.783449 | 5.736761 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0021270 | RBH | 0.024883 | 0.020513 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0021670 | RBH | 4.825060 | 0.0 | 13.851367 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0377000 | RBH | 0.7551005 | 2.7110125 | 5.2936245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0021100 | RBH | 0.098160 | 0.0 | 1.147589 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0355400 | RBH | 1.527225 | 2.792833 | 3.552899 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0021550 | RBH | 0.060736 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0021510 | RBH | 0.400068 | 0.916735 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0021190 | RBH | 0.177218 | 3.562573 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0021850 | RBH | 0.284509 | 0.171069 | 1.288316 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0021420 | RBH | 0.086559 | 0.432567 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G021240 | RBH | 0.344452 | 0.0 | 1.753420 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0021470 | RBH | 1.218899 | 1.449068 | 6.324240 |
