Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0305600 | OGI:06054070 | 4/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:20217062-20218835 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGTGGTGCGCGGAGGTGGAGGCAGGGCGGAGCGCTGCGGCGGCGAATGCAGGGCTCCGGCTGCACTCCGCCGATTTCTCGCCGGAGTCGGGCCGGAGCATGGCGGTGGGCACGGACAGTGGCGGATCCAGAAAATCGATTCGTTGGTGTCATAACGTGTCTATCGGTGTCATAGTATGCTAATTATGTTTAGATCATAGTGTTATAACATATGGATAAACAGTTTTGCTATAGGTTTTGCCGAAAGTCGTCGGTGTCGCCTGACACCGGGTCTAGTACTGTAGATCCGCCCCTGGGCACGGAGGCGGAGGCGGGGTCAGGCGCCGTGGTGGTTGGCGCGGAGGCCGGCGCCACGGAGGTGAAGGCGGGCGAGAGCATACAGGCGGGCGCCACGGCGACGGAGGCGGGGCTCCGGCGGAACTCCGCCGTCGAGACGGTGGCTTTCCACCGTGCTCACGGCCTCTGCAACCGCCGCCTCCGCTTCTCGCGCGTTGTTGTCGTTGCCGCCGCCGCCTCCTCTCTCCTTCCTCTGTTCTCCTTCCTCCTCTCTCCTTCCTCTGTTCTCGATTTCTATGTGGGCTCGAAGGGAAGGCTCCTTATGCATATACGGTGTTCGATGAAATGTTTATCAGGTATGATTTGCTGTTTTCATCGCATTTTCGCCGCCCTTTTGAGGATCAATGGATCATCAGAAGATAATGACATGATCTACACTACATCGCAGAGAAATGATCGGCGCCCTCGACGTCGGCCGGTTGATGGATCGATGGGCTCGGGCAGCCCGTGGCGTTTGTGGCCGGCGCAGTTGCAGACGAACAGGAGGACGCCTCACAGACACAGCCTCTCTGGAGTGATGACCTCATTGAGCAGAACGAGGCCCCACCTGGTCAGTGGGACGACCAGGACGCCTCTGCCGTCGGGCGGTGACGTCATTGCGCAGGATGAGGCCCCACCTGTCAGCGAGCAGGAGGCTCGTGCACCTTTTAAAGTGCTCGCCTTGGCGCTCGCCCAGAGCCCCAAGCCGTAACTGACTAACCGTCGAGCTCCTCCTACCTGCGTCTCGCGCCGCCAAGAAACCCAAGATCATCCCACCGCGCTCCCGTCTCCGCCTCCGCCTCCGCCTCCGCCGCTGCTCGCCGGAGCCCGGAAGCGATGGAGCAGTTCCACGACAGGGACCACGAGCGGCTGCGGAGCCGCGTGCACGGCACGTACCTCCACGCCGATGAGGACGGGAGGGGCGTCTCCCTGCAGCCGACCGGGGCATCGCTCACCGCGGTTTGGACGGTGCACCTGGAGGGCGGTAGCCCCCAGCGCCGCCTCCTGCTCCAAAGCGCCGCCTACGGCCGATACCTTGCGGCCACAGGCAAGCCGGCGCCGAGCGGCCTCCGTGGCCACCGTGTCGCGCTTATCAACCTCGACCAGCTGGACGACGAGTCCGTGTCGTGGGAGGCGGTTCGGACGGCGAAAGGAGATGACGTGCTGCTCCGGCACGCCGCGGGGCGCAACCTACGCGCCAACCACGGCGCTGGCGCCACCGTTGATGATAGATACAGCAGGATGCTGCTCTGGGTGGACCAGGTGGTTGAGGCCATCCCCTCGGCAGATTCCGTACCCAGGCCTCCACCGATCTCAAGGGTGAGCACGCTACACCCTCTTCCATGGTACATCCTGAATTGGTTGGGGGCAGGGGAGCGATTCTTTAGCCCATTACTGCGTTACCTAGGTTCTTGCAGCCAAGCTCCATTTCTGGTTGTATTCTTGCGTCAGAGTTAG
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| CDS seq | ATGGTGGTGCGCGGAGGTGGAGGCAGGGCGGAGCGCTGCGGCGGCGAATGCAGGGCTCCGGCTGCACTCCGCCGATTTCTCGCCGGAGTCGGGCCGGAGCATGGCGGTGGGCACGGACAGTGGCGGATCCAGAAAATCGATTCGTTTTGCCGAAAGTCGTCGGTGTCGCCTGACACCGGGTCTAGTACTGTAGATCCGCCCCTGGGCACGGAGGCGGAGGCGGGGTCAGGCGCCGTGGTGGTTGGCGCGGAGGCCGGCGCCACGGAGGTGAAGGCGGGCGAGAGCATACAGGCGGGCGCCACGGCGACGGAGGCGGGGCTCCGGCGGAACTCCGCCGTCGAGACGGTGGCTTTCCACCGTGCTCACGGCCTCTGCAACCGCCGCCTCCGCTTCTCGCGCGTTGTTGTCGTTGCCGCCGCCGCCTCCTCTCTCCTTCCTCTGTTCTCCTTCCTCCTCTCTCCTTCCTCTGTTCTCGATTTCTATAGAAATGATCGGCGCCCTCGACGTCGGCCGGTTGATGGATCGATGGGCTCGGGCAGCCCGTGGCGTTTGTGGCCGGCGCAGTTGCAGACGAACAGGAGGACGCCTCACAGACACAGCCTCTCTGGAGTGATGACCTCATTGAGCAGAACGAGGCCCCACCTGGTCAGTGGGACGACCAGGACGCCTCTGCCGTCGGGCGGTGACGTCATTGCGCAGGATGAGGCCCCACCTGTCAGCGAGCAGGAGGCTCGTGCACCTTTTAAAGTGCTCGCCTTGGCGCTCGCCCAGAGCCCCAAGCCCTCCTCCTACCTGCGTCTCGCGCCGCCAAGAAACCCAAGATCATCCCACCGCGCTCCCGTCTCCGCCTCCGCCTCCGCCTCCGCCGCTGCTCGCCGGAGCCCGGAAGCGATGGAGCAGTTCCACGACAGGGACCACGAGCGGCTGCGGAGCCGCGTGCACGGCACGTACCTCCACGCCGATGAGGACGGGAGGGGCGTCTCCCTGCAGCCGACCGGGGCATCGCTCACCGCGGTTTGGACGGTGCACCTGGAGGGCGGTAGCCCCCAGCGCCGCCTCCTGCTCCAAAGCGCCGCCTACGGCCGATACCTTGCGGCCACAGGCAAGCCGGCGCCGAGCGGCCTCCGTGGCCACCGTGTCGCGCTTATCAACCTCGACCAGCTGGACGACGAGTCCGTGTCGTGGGAGGCGGTTCGGACGGCGAAAGGAGATGACGTGCTGCTCCGGCACGCCGCGGGGCGCAACCTACGCGCCAACCACGGCGCTGGCGCCACCGTTGATGATAGATACAGCAGGATGCTGCTCTGGGTGGACCAGGTGGTTGAGGCCATCCCCTCGGCAGATTCCGTACCCAGGCCTCCACCGATCTCAAGGGTGAGCACGCTACACCCTCTTCCATGGTACATCCTGAATTGGTTGGGGGCAGGGGAGCGATTCTTTAGCCCATTACTGCGTTACCTAGGTTCTTGCAGCCAAGCTCCATTTCTGGTTGTATTCTTGCGTCAGAGTTAG
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| Protein seq | MVVRGGGGRAERCGGECRAPAALRRFLAGVGPEHGGGHGQWRIQKIDSFCRKSSVSPDTGSSTVDPPLGTEAEAGSGAVVVGAEAGATEVKAGESIQAGATATEAGLRRNSAVETVAFHRAHGLCNRRLRFSRVVVVAAAASSLLPLFSFLLSPSSVLDFYRNDRRPRRRPVDGSMGSGSPWRLWPAQLQTNRRTPHRHSLSGVMTSLSRTRPHLVSGTTRTPLPSGGDVIAQDEAPPVSEQEARAPFKVLALALAQSPKPSSYLRLAPPRNPRSSHRAPVSASASASAAARRSPEAMEQFHDRDHERLRSRVHGTYLHADEDGRGVSLQPTGASLTAVWTVHLEGGSPQRRLLLQSAAYGRYLAATGKPAPSGLRGHRVALINLDQLDDESVSWEAVRTAKGDDVLLRHAAGRNLRANHGAGATVDDRYSRMLLWVDQVVEAIPSADSVPRPPPISRVSTLHPLPWYILNWLGAGERFFSPLLRYLGSCSQAPFLVVFLRQS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0305600 | OsMH63_06T0305600-mRNA-1 | Chr06 | 20217062 | 20218835 | + | maker | ||
| CDS seq | ATGGTGGTGCGCGGAGGTGGAGGCAGGGCGGAGCGCTGCGGCGGCGAATGCAGGGCTCCGGCTGCACTCCGCCGATTTCTCGCCGGAGTCGGGCCGGAGCATGGCGGTGGGCACGGACAGTGGCGGATCCAGAAAATCGATTCGTTTTGCCGAAAGTCGTCGGTGTCGCCTGACACCGGGTCTAGTACTGTAGATCCGCCCCTGGGCACGGAGGCGGAGGCGGGGTCAGGCGCCGTGGTGGTTGGCGCGGAGGCCGGCGCCACGGAGGTGAAGGCGGGCGAGAGCATACAGGCGGGCGCCACGGCGACGGAGGCGGGGCTCCGGCGGAACTCCGCCGTCGAGACGGTGGCTTTCCACCGTGCTCACGGCCTCTGCAACCGCCGCCTCCGCTTCTCGCGCGTTGTTGTCGTTGCCGCCGCCGCCTCCTCTCTCCTTCCTCTGTTCTCCTTCCTCCTCTCTCCTTCCTCTGTTCTCGATTTCTATAGAAATGATCGGCGCCCTCGACGTCGGCCGGTTGATGGATCGATGGGCTCGGGCAGCCCGTGGCGTTTGTGGCCGGCGCAGTTGCAGACGAACAGGAGGACGCCTCACAGACACAGCCTCTCTGGAGTGATGACCTCATTGAGCAGAACGAGGCCCCACCTGGTCAGTGGGACGACCAGGACGCCTCTGCCGTCGGGCGGTGACGTCATTGCGCAGGATGAGGCCCCACCTGTCAGCGAGCAGGAGGCTCGTGCACCTTTTAAAGTGCTCGCCTTGGCGCTCGCCCAGAGCCCCAAGCCCTCCTCCTACCTGCGTCTCGCGCCGCCAAGAAACCCAAGATCATCCCACCGCGCTCCCGTCTCCGCCTCCGCCTCCGCCTCCGCCGCTGCTCGCCGGAGCCCGGAAGCGATGGAGCAGTTCCACGACAGGGACCACGAGCGGCTGCGGAGCCGCGTGCACGGCACGTACCTCCACGCCGATGAGGACGGGAGGGGCGTCTCCCTGCAGCCGACCGGGGCATCGCTCACCGCGGTTTGGACGGTGCACCTGGAGGGCGGTAGCCCCCAGCGCCGCCTCCTGCTCCAAAGCGCCGCCTACGGCCGATACCTTGCGGCCACAGGCAAGCCGGCGCCGAGCGGCCTCCGTGGCCACCGTGTCGCGCTTATCAACCTCGACCAGCTGGACGACGAGTCCGTGTCGTGGGAGGCGGTTCGGACGGCGAAAGGAGATGACGTGCTGCTCCGGCACGCCGCGGGGCGCAACCTACGCGCCAACCACGGCGCTGGCGCCACCGTTGATGATAGATACAGCAGGATGCTGCTCTGGGTGGACCAGGTGGTTGAGGCCATCCCCTCGGCAGATTCCGTACCCAGGCCTCCACCGATCTCAAGGGTGAGCACGCTACACCCTCTTCCATGGTACATCCTGAATTGGTTGGGGGCAGGGGAGCGATTCTTTAGCCCATTACTGCGTTACCTAGGTTCTTGCAGCCAAGCTCCATTTCTGGTTGTATTCTTGCGTCAGAGTTAG
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| Protein seq | MVVRGGGGRAERCGGECRAPAALRRFLAGVGPEHGGGHGQWRIQKIDSFCRKSSVSPDTGSSTVDPPLGTEAEAGSGAVVVGAEAGATEVKAGESIQAGATATEAGLRRNSAVETVAFHRAHGLCNRRLRFSRVVVVAAAASSLLPLFSFLLSPSSVLDFYRNDRRPRRRPVDGSMGSGSPWRLWPAQLQTNRRTPHRHSLSGVMTSLSRTRPHLVSGTTRTPLPSGGDVIAQDEAPPVSEQEARAPFKVLALALAQSPKPSSYLRLAPPRNPRSSHRAPVSASASASAAARRSPEAMEQFHDRDHERLRSRVHGTYLHADEDGRGVSLQPTGASLTAVWTVHLEGGSPQRRLLLQSAAYGRYLAATGKPAPSGLRGHRVALINLDQLDDESVSWEAVRTAKGDDVLLRHAAGRNLRANHGAGATVDDRYSRMLLWVDQVVEAIPSADSVPRPPPISRVSTLHPLPWYILNWLGAGERFFSPLLRYLGSCSQAPFLVVFLRQS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g06580 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0004400 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0018140 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0052600 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0017620 | SBH | 0.000000 | 0.000000 | 0.036977 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0279900 | SBH | 0.152919 | 0 | 0.5559825 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0018030 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0017910 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0017660 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0018340 | SBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0017810 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G017770 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0017920 | SBH | 0.0 | 0.0 | 0.0 |
