Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0118600 | OGI:06019740 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:6903267-6905277 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AAAAGATTCGTCTTGCAATTTACACGTAATTTATGTAATTAGTTTTTTTTACTATATTTAATACTCCATACATGTATCCAAACATTAAATACATGTATCCAAATATTTAATGTGACAGGCGAAAAATTTTCGTTTCGAAACTAAACAGGGCCTTAAGTCAAGAACACACCATATTTATATCGGAATGGCTATCTGTAATCACAACCTTTCCGAATTCCAATGGATGAACACGGGGCTTAATTGCTAACATATACCAGTATACTGCTGCACCTTTCATCCTCGCAATTAATTCTGCTAATTTTGTGCAGTGAATTTATTCACAGTTAGCTTAGGTGAAGCTGCACTCGGGTGGCGGCACGGGGCGCTTCTTGCTCTTGTCGGTGCAGTAGTCATAGGTCAGGTTCCCCCTCACGCCATCGTACGCCGCCTGCTGCGCCGCCGTCAGCCTCCTGTACTCGCCGCCGTTCCACCACCACGTGTCCGGCGACCCGCAGTCGTCCGAGCTGACGCCGCCGCCGGCGGCGGCGGCGCAGGCGTCGACGGCGAAGCCCTGGAAGGCCGCGGTGAATGGCGCGCGGGCCCAGTCGACCTTGGTCCGGCCGCCGTCCGTCGCCCAGTCGGAGGCGTCCCACACGCTCCCCCGCGGCCGCATCGGCTTCGCCGGGAACTCGAACTCCGGGCCCCGGCTCGTCAGGTTCTTCAGCACCCTCACCGGCGTCTCGTCCACGAATATCCTGCCAAATAATTAATCAAATCGATGGCTTGTACATGTGATTTGTCTTAGCTTCTACAGAATTCAGGTGGTCATTTTGTAGGAGTTAGATTTATCCAGGTTTTAAATCTCCGTCTAGAGCTGCTTGAGAAGGGTCAACTGCTAAATGTTATAGCCCGCTATTTAAAACACTGGATTTATCCCATCGCTTATTGTATGTGCAAGGGTTTGTTGGTAGAGACGGAAGATGTAACTATTTCTACTATTTGTTTTAAAACAAAAGTGTATATAGCCGTCATGGTGACATTGAACTGAGCTTACACGAGGTGGAAGGGGTTCCAGAGGATGGAGTAGTCATGGAAGTCGGCAGCGGGGTCGAACCAGAGGCGGAGGCGCTGCTCGCGGTCGCCGTGGCCGCCGACGAAGACGTTGGTTTGAAGGGTGATGGGGTTGCCATCCTTGTCGCCAAGGAACTCGAAGTCCACCTCGTCCTGCACGTCCCTGTCAGGCTCTGACGCCAGCTACCCGTGCAATTTCAGAAATAAATTAAATTAATTGTTACATTCAGTTAATTACTGGTGCTTAGTTTTTAGTCAATATTAAAGAACATGTGATAGGAATTAACACTTATATAATTAAGTGAAGTTGATTTAGCAGTTTAGCACTCACATAGTAGGCTGTCACAACGCCGGCAGTGTAGCCGGCAGGAACCTTGATCCTCATGTGGAAGAACCCTGAGCCGTACATCAACTTGGACCTGAATCCAGCACCTGCATGCATGATAATTAATTTGCATGATCACATCAAGCTAGTTAAGCATAAAATAGAGAGAGAAAAGAAGCAAAAACTATGATCAAGCTGATCTAAATGCTGAATCTAACAGTGTCATATATATAATCTATCTCTGTGTATACCAGAGCTCTTGTCCAGGGTGAGGCTAATCTGCGTGCCCTGGTTGACCAGGTGGTAGCCGTCTCCACCATATGTTGCCACGTAGTTGTCGTCGAACACCGTCGCCACCGCCGGCGGCGGCGCCGGCGCCGGCGGCACACTATCCACGGCCAGGAGGAGGACGGCGATGGCGATGAGGTGGAGGAGGAACAGCCATGGCGGCTGCACTTGGAAAACCATATATATACTTTAGCCAATGTTTGCTAGTACTAACTAATTAATTAACTCGATTGATTATTGCGATGGAGAAGTTCTTGTGTACGTAGCTCACCTAGCTAGCTAGCTAGCTAGCAGTCCGTTATATAGTGTTGATGTGTCTTGATGATGATCTGATCCGAGCTAGATTTG
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| CDS seq | ATGGTTTTCCAAGTGCAGCCGCCATGGCTGTTCCTCCTCCACCTCATCGCCATCGCCGTCCTCCTCCTGGCCGTGGATAGTGTGCCGCCGGCGCCGGCGCCGCCGCCGGCGGTGGCGACGGTGTTCGACGACAACTACGTGGCAACATATGGTGGAGACGGCTACCACCTGGTCAACCAGGGCACGCAGATTAGCCTCACCCTGGACAAGAGCTCTGGTGCTGGATTCAGGTCCAAGTTGATGTACGGCTCAGGGTTCTTCCACATGAGGATCAAGGTTCCTGCCGGCTACACTGCCGGCGTTGTGACAGCCTACTATCTGGCGTCAGAGCCTGACAGGGACGTGCAGGACGAGGTGGACTTCGAGTTCCTTGGCGACAAGGATGGCAACCCCATCACCCTTCAAACCAACGTCTTCGTCGGCGGCCACGGCGACCGCGAGCAGCGCCTCCGCCTCTGGTTCGACCCCGCTGCCGACTTCCATGACTACTCCATCCTCTGGAACCCCTTCCACCTCGTGATATTCGTGGACGAGACGCCGGTGAGGGTGCTGAAGAACCTGACGAGCCGGGGCCCGGAGTTCGAGTTCCCGGCGAAGCCGATGCGGCCGCGGGGGAGCGTGTGGGACGCCTCCGACTGGGCGACGGACGGCGGCCGGACCAAGGTCGACTGGGCCCGCGCGCCATTCACCGCGGCCTTCCAGGGCTTCGCCGTCGACGCCTGCGCCGCCGCCGCCGGCGGCGGCGTCAGCTCGGACGACTGCGGGTCGCCGGACACGTGGTGGTGGAACGGCGGCGAGTACAGGAGGCTGACGGCGGCGCAGCAGGCGGCGTACGATGGCGTGAGGGGGAACCTGACCTATGACTACTGCACCGACAAGAGCAAGAAGCGCCCCGTGCCGCCACCCGAGTGCAGCTTCACCTAA
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| Protein seq | MVFQVQPPWLFLLHLIAIAVLLLAVDSVPPAPAPPPAVATVFDDNYVATYGGDGYHLVNQGTQISLTLDKSSGAGFRSKLMYGSGFFHMRIKVPAGYTAGVVTAYYLASEPDRDVQDEVDFEFLGDKDGNPITLQTNVFVGGHGDREQRLRLWFDPAADFHDYSILWNPFHLVIFVDETPVRVLKNLTSRGPEFEFPAKPMRPRGSVWDASDWATDGGRTKVDWARAPFTAAFQGFAVDACAAAAGGGVSSDDCGSPDTWWWNGGEYRRLTAAQQAAYDGVRGNLTYDYCTDKSKKRPVPPPECSFT |
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| Function | Putative xyloglucan endotransglucosylase/hydrolase protein 1 [UniProtKB/Swiss-Prot:Q9SV61] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0118600 | OsMH63_06T0118600.1 | Chr06 | 6903267 | 6905277 | - | maker | ||
| CDS seq | ATGGTTTTCCAAGTGCAGCCGCCATGGCTGTTCCTCCTCCACCTCATCGCCATCGCCGTCCTCCTCCTGGCCGTGGATAGTGTGCCGCCGGCGCCGGCGCCGCCGCCGGCGGTGGCGACGGTGTTCGACGACAACTACGTGGCAACATATGGTGGAGACGGCTACCACCTGGTCAACCAGGGCACGCAGATTAGCCTCACCCTGGACAAGAGCTCTGGTGCTGGATTCAGGTCCAAGTTGATGTACGGCTCAGGGTTCTTCCACATGAGGATCAAGGTTCCTGCCGGCTACACTGCCGGCGTTGTGACAGCCTACTATGACGAGGTGGACTTCGAGTTCCTTGGCGACAAGGATGGCAACCCCATCACCCTTCAAACCAACGTCTTCGTCGGCGGCCACGGCGACCGCGAGCAGCGCCTCCGCCTCTGGTTCGACCCCGCTGCCGACTTCCATGACTACTCCATCCTCTGGAACCCCTTCCACCTCGTGATATTCGTGGACGAGACGCCGGTGAGGGTGCTGAAGAACCTGACGAGCCGGGGCCCGGAGTTCGAGTTCCCGGCGAAGCCGATGCGGCCGCGGGGGAGCGTGTGGGACGCCTCCGACTGGGCGACGGACGGCGGCCGGACCAAGGTCGACTGGGCCCGCGCGCCATTCACCGCGGCCTTCCAGGGCTTCGCCGTCGACGCCTGCGCCGCCGCCGCCGGCGGCGGCGTCAGCTCGGACGACTGCGGGTCGCCGGACACGTGGTGGTGGAACGGCGGCGAGTACAGGAGGCTGACGGCGGCGCAGCAGGCGGCGTACGATGGCGTGAGGGGGAACCTGACCTATGACTACTGCACCGACAAGAGCAAGAAGCGCCCCGTGCCGCCACCCGAGTGCAGCTTCACCTAA
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| Protein seq | MVFQVQPPWLFLLHLIAIAVLLLAVDSVPPAPAPPPAVATVFDDNYVATYGGDGYHLVNQGTQISLTLDKSSGAGFRSKLMYGSGFFHMRIKVPAGYTAGVVTAYYDEVDFEFLGDKDGNPITLQTNVFVGGHGDREQRLRLWFDPAADFHDYSILWNPFHLVIFVDETPVRVLKNLTSRGPEFEFPAKPMRPRGSVWDASDWATDGGRTKVDWARAPFTAAFQGFAVDACAAAAGGGVSSDDCGSPDTWWWNGGEYRRLTAAQQAAYDGVRGNLTYDYCTDKSKKRPVPPPECSFT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0118600 | OsMH63_06T0118600.2 | Chr06 | 6903267 | 6905277 | - | maker | ||
| CDS seq | ATGGTTTTCCAAGTGCAGCCGCCATGGCTGTTCCTCCTCCACCTCATCGCCATCGCCGTCCTCCTCCTGGCCGTGGATAGTGTGCCGCCGGCGCCGGCGCCGCCGCCGGCGGTGGCGACGGTGTTCGACGACAACTACGTGGCAACATATGGTGGAGACGGCTACCACCTGGTCAACCAGGGCACGCAGATTAGCCTCACCCTGGACAAGAGCTCTGGTGCTGGATTCAGGTCCAAGTTGATGTACGGCTCAGGGTTCTTCCACATGAGGATCAAGGTTCCTGCCGGCTACACTGCCGGCGTTGTGACAGCCTACTATCTGGCGTCAGAGCCTGACAGGGACGTGCAGGACGAGGTGGACTTCGAGTTCCTTGGCGACAAGGATGGCAACCCCATCACCCTTCAAACCAACGTCTTCGTCGGCGGCCACGGCGACCGCGAGCAGCGCCTCCGCCTCTGGATATTCGTGGACGAGACGCCGGTGAGGGTGCTGAAGAACCTGACGAGCCGGGGCCCGGAGTTCGAGTTCCCGGCGAAGCCGATGCGGCCGCGGGGGAGCGTGTGGGACGCCTCCGACTGGGCGACGGACGGCGGCCGGACCAAGGTCGACTGGGCCCGCGCGCCATTCACCGCGGCCTTCCAGGGCTTCGCCGTCGACGCCTGCGCCGCCGCCGCCGGCGGCGGCGTCAGCTCGGACGACTGCGGGTCGCCGGACACGTGGTGGTGGAACGGCGGCGAGTACAGGAGGCTGACGGCGGCGCAGCAGGCGGCGTACGATGGCGTGAGGGGGAACCTGACCTATGACTACTGCACCGACAAGAGCAAGAAGCGCCCCGTGCCGCCACCCGAGTGCAGCTTCACCTAA
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| Protein seq | MVFQVQPPWLFLLHLIAIAVLLLAVDSVPPAPAPPPAVATVFDDNYVATYGGDGYHLVNQGTQISLTLDKSSGAGFRSKLMYGSGFFHMRIKVPAGYTAGVVTAYYLASEPDRDVQDEVDFEFLGDKDGNPITLQTNVFVGGHGDREQRLRLWIFVDETPVRVLKNLTSRGPEFEFPAKPMRPRGSVWDASDWATDGGRTKVDWARAPFTAAFQGFAVDACAAAAGGGVSSDDCGSPDTWWWNGGEYRRLTAAQQAAYDGVRGNLTYDYCTDKSKKRPVPPPECSFT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0118600 | OsMH63_06T0118600.3 | Chr06 | 6903267 | 6905277 | - | maker | ||
| CDS seq | ATGGTTTTCCAAGTGCAGCCGCCATGGCTGTTCCTCCTCCACCTCATCGCCATCGCCGTCCTCCTCCTGGCCGTGGATAGTGTGCCGCCGGCGCCGGCGCCGCCGCCGGCGGTGGCGACGGTGTTCGACGACAACTACGTGGCAACATATGGTGGAGACGGCTACCACCTGGTCAACCAGGGCACGCAGATTAGCCTCACCCTGGACAAGAGCTCTGGTGCTGGATTCAGGTCCAAGTTGATGTACGGCTCAGGGTTCTTCCACATGAGGATCAAGGTTCCTGCCGGCTACACTGCCGGCGTTGTGACAGCCTACTATCTGGCGTCAGAGCCTGACAGGGACGTGCAGGACGAGGTGGACTTCGAGTTCCTTGGCGACAAGGATGGCAACCCCATCACCCTTCAAACCAACGTCTTCGTCGGCGGCCACGGCGACCGCGAGCAGCGCCTCCGCCTCTGGTTCGACCCCGCTGCCGACTTCCATGACTACTCCATCCTCTGGAACCCCTTCCACCTCGTGATATTCGTGGACGAGACGCCGGTGAGGGTGCTGAAGAACCTGACGAGCCGGGGCCCGGAGTTCGAGTTCCCGGCGAAGCCGATGCGGCCGCGGGGGAGCGTGTGGGACGCCTCCGACTGGGCGACGGACGGCGGCCGGACCAAGGTCGACTGGGCCCGCGCGCCATTCACCGCGGCCTTCCAGGGCTTCGCCGTCGACGCCTGCGCCGCCGCCGCCGGCGGCGGCGTCAGCTCGGACGACTGCGGGTCGCCGGACACGTGGTGGTGGAACGGCGGCGAGTACAGGAGGCTGACGGCGGCGCAGCAGGCGGCGTACGATGGCGTGAGGGGGAACCTGACCTATGACTACTGCACCGACAAGAGCAAGAAGCGCCCCGTGCCGCCACCCGAGTGCAGCTTCACCTAA
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| Protein seq | MVFQVQPPWLFLLHLIAIAVLLLAVDSVPPAPAPPPAVATVFDDNYVATYGGDGYHLVNQGTQISLTLDKSSGAGFRSKLMYGSGFFHMRIKVPAGYTAGVVTAYYLASEPDRDVQDEVDFEFLGDKDGNPITLQTNVFVGGHGDREQRLRLWFDPAADFHDYSILWNPFHLVIFVDETPVRVLKNLTSRGPEFEFPAKPMRPRGSVWDASDWATDGGRTKVDWARAPFTAAFQGFAVDACAAAAGGGVSSDDCGSPDTWWWNGGEYRRLTAAQQAAYDGVRGNLTYDYCTDKSKKRPVPPPECSFT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.007626 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0237400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g13040 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0237400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0009250 | SBH | 0.0 | 0.0 | 0.515340 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0009120 | SBH | 0.0 | 0.0 | 0.521543 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0009130 | SBH | 0.0 | 0.0 | 2.722153 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0009190 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0009240 | SBH | 0.0 | 0.0 | 3.153311 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0118700 | RBH | 8.6476625 | 8.8374835 | 12.0945165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0008820 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0119700 | SBH | 0 | 0.1450765 | 0.0313575 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0009290 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0009110 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0009150 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0029500 | SBH | 0.0 | 0.0 | 0.292621 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0009040 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G008930 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0009220 | SBH | 0.0 | 0.0 | 0.854723 |
