Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_06G0056700 | OGI:06009560 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:3165664-3166620 | ||||||||
| Gene Symbol | SDRLK-66 | ||||||||||
| DNA seq | TCAAGAACAATGGAGTCTCGGGATGTAATTGCAGATGCTGTTTATACCACACACTCCATGCATTTGGCATAATCTAGAGAATGCCATCCAAGAAACTGACCAGTTGCCACTGGTCTCGTTTAGGCTGTACAGCCTAAGATTTCCATCGTAATCCAGAGTCAACCTCCTCATGACATGATCGCCAAGATCAGAGTCTTCAAACTTAAATAGGTCACTTGATACAAAACGACCTGTCTGATTTAGAACCCCATATCGGCGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCAGGTGAACCGAAGGATTTGGCCAATATATGCTGGCAGTGTCAGGGCCATTGTAGACGAGAGTCAAAATATTGTTACTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAACAAACCCCTGGCAGATGCAGATACCAGCTTTACATTCCTAGTTATTGGTTGCAACGGCAGAAGTGTGTCTGTTGGCGAGTCGAAGCTCCTCCATAGATGCTGGCCTTGTAGGTCCATGACAACAAGGTTTCCATTGTTGAGAAGCTCTGCTCGATTTGCTTGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCCATTGTAGTCAAGAAGGGCCAAGGTCCCGTCGTTCTGGAAGGTGAGCCTGGAGCCCTTGCCATTCACCGGAGCATCGCGGTTCGCCGTCCAAGCGACAGTCTTCTCTGACGACCTGGAAAACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACAGGAGAAATCGTCATTGGGGGACACTAGGATGGCGGTGGTGTCATCCTGGGTTGAAATGGATGAACGCCTAGTAAGAAAGCTCTTTTGATCTTTTGCAACAGCAGTGGGGAGCATGAGAAGGAAGGATATCACTGTGGTGAAAATGCAGAAGCCTCTCACGGCGACGGTAAGTATTTTTTTGGTCATCAT
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| CDS seq | ATGATGACCAAAAAAATACTTACCGTCGCCGTGAGAGGCTTCTGCATTTTCACCACAGTGATATCCTTCCTTCTCATGCTCCCCACTGCTGTTGCAAAAGATCAAAAGAGCTTTCTTACTAGGCGTTCATCCATTTCAACCCAGGATGACACCACCGCCATCCTAGTGTCCCCCAATGACGATTTCTCCTGTGGCTTCTACAAGGTGGCCACCAACGCCTTCACCTTCTCCATCTGGTTTTCCAGGTCGTCAGAGAAGACTGTCGCTTGGACGGCGAACCGCGATGCTCCGGTGAATGGCAAGGGCTCCAGGCTCACCTTCCAGAACGACGGGACCTTGGCCCTTCTTGACTACAATGGCAAAGTTGTATGGAGCACCAACACAACAGCCACTCAAGCAAATCGAGCAGAGCTTCTCAACAATGGAAACCTTGTTGTCATGGACCTACAAGGCCAGCATCTATGGAGGAGCTTCGACTCGCCAACAGACACACTTCTGCCGTTGCAACCAATAACTAGGAATGTAAAGCTGGTATCTGCATCTGCCAGGGGTTTGTTATATTCAGGCTTCTACAACTTTCTCTTCGACAGTAACAATATTTTGACTCTCGTCTACAATGGCCCTGACACTGCCAGCATATATTGGCCAAATCCTTCGGTTCACCTGCCATGGAAGAATGGAAGGACAACTTATGACAGTCGCCGATATGGGGTTCTAAATCAGACAGGTCGTTTTGTATCAAGTGACCTATTTAAGTTTGAAGACTCTGATCTTGGCGATCATGTCATGAGGAGGTTGACTCTGGATTACGATGGAAATCTTAGGCTGTACAGCCTAAACGAGACCAGTGGCAACTGGTCAGTTTCTTGGATGGCATTCTCTAGATTATGCCAAATGCATGGAGTGTGTGGTATAAACAGCATCTGCAATTACATCCCGAGACTCCATTGTTCTTGA
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| Protein seq | MMTKKILTVAVRGFCIFTTVISFLLMLPTAVAKDQKSFLTRRSSISTQDDTTAILVSPNDDFSCGFYKVATNAFTFSIWFSRSSEKTVAWTANRDAPVNGKGSRLTFQNDGTLALLDYNGKVVWSTNTTATQANRAELLNNGNLVVMDLQGQHLWRSFDSPTDTLLPLQPITRNVKLVSASARGLLYSGFYNFLFDSNNILTLVYNGPDTASIYWPNPSVHLPWKNGRTTYDSRRYGVLNQTGRFVSSDLFKFEDSDLGDHVMRRLTLDYDGNLRLYSLNETSGNWSVSWMAFSRLCQMHGVCGINSICNYIPRLHCS |
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| Function | Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_06G0056700 | OsMH63_06T0056700.1 | Chr06 | 3165664 | 3166620 | - | maker | ||
| CDS seq | ATGATGACCAAAAAAATACTTACCGTCGCCGTGAGAGGCTTCTGCATTTTCACCACAGTGATATCCTTCCTTCTCATGCTCCCCACTGCTGTTGCAAAAGATCAAAAGAGCTTTCTTACTAGGCGTTCATCCATTTCAACCCAGGATGACACCACCGCCATCCTAGTGTCCCCCAATGACGATTTCTCCTGTGGCTTCTACAAGGTGGCCACCAACGCCTTCACCTTCTCCATCTGGTTTTCCAGGTCGTCAGAGAAGACTGTCGCTTGGACGGCGAACCGCGATGCTCCGGTGAATGGCAAGGGCTCCAGGCTCACCTTCCAGAACGACGGGACCTTGGCCCTTCTTGACTACAATGGCAAAGTTGTATGGAGCACCAACACAACAGCCACTCAAGCAAATCGAGCAGAGCTTCTCAACAATGGAAACCTTGTTGTCATGGACCTACAAGGCCAGCATCTATGGAGGAGCTTCGACTCGCCAACAGACACACTTCTGCCGTTGCAACCAATAACTAGGAATGTAAAGCTGGTATCTGCATCTGCCAGGGGTTTGTTATATTCAGGCTTCTACAACTTTCTCTTCGACAGTAACAATATTTTGACTCTCGTCTACAATGGCCCTGACACTGCCAGCATATATTGGCCAAATCCTTCGGTTCACCTGCCATGGAAGAATGGAAGGACAACTTATGACAGTCGCCGATATGGGGTTCTAAATCAGACAGGTCGTTTTGTATCAAGTGACCTATTTAAGTTTGAAGACTCTGATCTTGGCGATCATGTCATGAGGAGGTTGACTCTGGATTACGATGGAAATCTTAGGCTGTACAGCCTAAACGAGACCAGTGGCAACTGGTCAGTTTCTTGGATGGCATTCTCTAGATTATGCCAAATGCATGGAGTGTGTGGTATAAACAGCATCTGCAATTACATCCCGAGACTCCATTGTTCTTGA
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| Protein seq | MMTKKILTVAVRGFCIFTTVISFLLMLPTAVAKDQKSFLTRRSSISTQDDTTAILVSPNDDFSCGFYKVATNAFTFSIWFSRSSEKTVAWTANRDAPVNGKGSRLTFQNDGTLALLDYNGKVVWSTNTTATQANRAELLNNGNLVVMDLQGQHLWRSFDSPTDTLLPLQPITRNVKLVSASARGLLYSGFYNFLFDSNNILTLVYNGPDTASIYWPNPSVHLPWKNGRTTYDSRRYGVLNQTGRFVSSDLFKFEDSDLGDHVMRRLTLDYDGNLRLYSLNETSGNWSVSWMAFSRLCQMHGVCGINSICNYIPRLHCS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.3207895 | 4.276138 | 0.414829 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0164900 | SBH | 0.271249 | 0.126373 | 0.427826 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g06920 | SBH | 0.067860 | 0.000000 | 0.123283 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0164900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0004800 | SBH | 0.0 | 0.365867 | 0.074983 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0004720 | SBH | 0.182826 | 0.0 | 0.259270 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0004640 | SBH | 0.123807 | 1.757458 | 0.097482 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0004800 | SBH | 0.057003 | 0.040463 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0004690 | SBH | 0.396238 | 2.838548 | 0.429901 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0056800 | RBH | 0.515415 | 2.0876865 | 1.1919025 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0004560 | SBH | 0.000000 | 0.119531 | 0.235512 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0056500 | SBH | 0.2118515 | 1.5991575 | 1.2328565 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0004810 | SBH | 0.0 | 0.099884 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0004660 | SBH | 0.053204 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0004700 | RBH | 0.345692 | 1.719022 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0004690 | SBH | 0.0 | 0.165837 | 0.094620 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0004560 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G004480 | SBH | 0.074798 | 0.0 | 0.384964 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0004720 | RBH | 0.636696 | 1.539949 | 2.768958 |
