Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_06G0017500		OGI:06002860 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr06:951279-954069		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GTAGCGTGACATGCATATGGGACACAATTATCCGCGTTTATACTTTTTTTTAATATAGAACGTGTTTATTATTGTCCCTCATTACAAAGTATATTCTCGTCTTCCTCTCGTAAGCTTGAGATCATGGGTCCATTGGCGCAAATATATAGCTAGCTAGCGACCAATTTACTCATAGGTAGGCAGGTGGCAAGATCGATCGAGCGATGACGTCCGTGACCTCAGATTTGCTGCAGTCGTGTTCGGAAACCATGATTTCATTCGTCCACAACATGACGGCTTCCTACGCCGACAAGAGCAACGAGTCCTCCGTGGTGTCCACCTCCGTCGTCATGTTCATCCTCGCCGCCGTCTTCTTCAACCTCAACCTCTTCAGCGGCGTCTCCGACGTCAGCGCCGTGCTCAACCCCACCGTCCGCATCTTCCTCTCCAGCGCGCTCAACCTCTTCCTCCCCGTCATGTCCTACCTCTTCTCCGAGGCCAAGCAAGCGCCGCTCGGAGTCGGCGACTCCACTACCACCACCAGAGACGCCCACTCCGATGACCTCTCGCTGCTGGCGCGTGTCATCCTCACATGGATGCTCCTCGTCGAGCTCCTCCGCAAGAAGGTGGAGGCCATCCTCATCACCACCGGCATGCACGTCTACTCCAGCCTCATCAGTCACGCCACCAGCGTCGCCTGGCTGGGCAACCTCGTCTTCTTCAACCTCCAGGCCGCCGGCAAGAAGGCGCTGTTCGGCGTCCTCTGGGTGCTCTGCGCGGCCAAGCTGGTGCAGCGCGTCGCCATCACCGAGATCGGGAAGCGCTCCTTCGCCCATGGCAAGAACGCCCGCCTCATCTCCTCCTACATGGCGCAGCTGCCAAAGCTGCTCGAGGTGGATGAGCATGTCGCCGCCGACGGCAGCAGGATGGAGCGGTGCAACTTCGCCGTGATGGGGGAAGAGAACATGGTGCTCAAGGCCGGACCACACGGCTACGAGCTCGACCTCGGCCTCGCCGCCGCCGTCGTCACCGTCGGGAAAATCTGGCAGACCAAACAACACCCAAGGCTCAAGAGGCTCTGCCTCTCCTTCGCTCTCTTCAAGCTTCTGCGCCGCCGGTTCGAGAACCTGCCGCCGGCGACCATGAAGGAGACCGACGAGTGCCGGGACCTCATCTTGGACGGCATGTGCAAGGATGCTCAGGCCACCGGCGACGTCCCGGCGGAGGTGGCGCTGTTCCAGGTGCTCAACGACGAGGTGAACTTCCTGGCCGAGTACTACCACTCCGTCCTCCCCGTGGTGCTCGCGAGCCCCTACTTCTTCGTCGTCAACTACCTCTGCTTCCCCGTCGTCGTGTTCGGCCTCTGCGTCATGACCATCGTCCTCTGCGGCAATGGCAACGTCTTGTACGCCTTCAAGAGCCTAACCAACGACAACTATGCCGTCTCATCCGGCATACTCTCGCTGACGAAATGCCTCTGGAAAAACGTCGTCAGGTCTCCGCTGGTGTTCTTCTCCATCGTCGACGTCTCCATCTGCTACCTCCTCTTCATCGTCGTCGTCTACGAGGAGGTGTGGGAGTTCGTCGTCTTCCTCCTCTCCAACTGGTTCATCGTCTCTCTGCTCTGCACCTTCTCCGCCAAGCCCCGCCGCCGCGAGAGCCCCACCTTCCGTGGCTCCGTCCGCTGCATCCTCTGGCTCCGCCGAAACCTCAGCCACTACCCTAGCCTCATCACCATCAAGCAGTTCACCGTCCTGAGCACATGCTGCCTGTCGCCGAGGTTGCCCACCGCCACGCTGCCCAGGCATGCGAAGCTCGCCATCCTAGAACGCTTCCGCGGCGGCGATCCTCTCAGCAACGGCGGCGCCGTGCTGACGTCGATGGGCGGTAGGCACCGGCGGTTCTCGCGGCTCTCGTGGGCGTGCCAGAGCGGAGCCGTCGCGGAGGTGATCCTCACCTGGCACATCGCCACCAGCCTCCTGGAGACGAAGCAGCAGCAGCAGCTTCCGACAAGTGCCAGCCGGAGCCGGAGGACGGCGGCGAGGCTGTCCAGATACTGCGCCTACCTCGTCGCCTTCCGGCCGGAGCTGCTGCCGGACGACCGGGAAGGCACGGAGCGCATCTACAAGGACCTGAAGAAGGGCATCAAGGCGGCGCTCGGCGGCGCACGGGGATACTACCTCTCGTCGGAGCGGAGCCGGCACGAGACGATCCGTGCGCTCCGGGTGGACGCCTCCGCCGCCGCCGACATGACGGTGCTCGAGAGGGGCGCCGTGCTGGGGAAGCAGCTGGTGGAGGACGACGAAGCCGGCGACGGCGCGGTGTGGGAGATGCTGGCCGACGTGTGGGTTGAGCTCGTCGTGTACGTGTCGCCGTCGCGCGCGGAGGAGCACGCCAGGGGGCACGAGGCGGCGCTGGCGCAGGGCAGCGAACTCGTGACGCTGCTCTGGGTGCTCGCCACGCACACCGGCATCGCCCGCCCGGACCACGACGGCGAAATCGACCAGCCGGCGGCGCCGGCATAGCGGAGCTCGCTTGCATTGCGCGCATTGGCGCGAACACCAAGTAATTAATGCGGTGTACTCGGATGCTTACGTCTACGTGTGCCCTGTGGTTTGGACGACATTGCTTTCCCGGCCATGTCTTGTTCGGTTTAATTTCCATCTCATGTGGAATCTCTCTTTGTTATTTGTGCTCTATTATATTTCCTTTTGCAATTGATGTCAAACATGTTAATTAATTTGTATATTTTGGCACTCCTATATGTTACTGATTTGCTACCAGTTCTATATAAATGATTTTTCTGTACGAG More
CDS seq		ATGACGTCCGTGACCTCAGATTTGCTGCAGTCGTGTTCGGAAACCATGATTTCATTCGTCCACAACATGACGGCTTCCTACGCCGACAAGAGCAACGAGTCCTCCGTGGTGTCCACCTCCGTCGTCATGTTCATCCTCGCCGCCGTCTTCTTCAACCTCAACCTCTTCAGCGGCGTCTCCGACGTCAGCGCCGTGCTCAACCCCACCGTCCGCATCTTCCTCTCCAGCGCGCTCAACCTCTTCCTCCCCGTCATGTCCTACCTCTTCTCCGAGGCCAAGCAAGCGCCGCTCGGAGTCGGCGACTCCACTACCACCACCAGAGACGCCCACTCCGATGACCTCTCGCTGCTGGCGCGTGTCATCCTCACATGGATGCTCCTCGTCGAGCTCCTCCGCAAGAAGGTGGAGGCCATCCTCATCACCACCGGCATGCACGTCTACTCCAGCCTCATCAGTCACGCCACCAGCGTCGCCTGGCTGGGCAACCTCGTCTTCTTCAACCTCCAGGCCGCCGGCAAGAAGGCGCTGTTCGGCGTCCTCTGGGTGCTCTGCGCGGCCAAGCTGGTGCAGCGCGTCGCCATCACCGAGATCGGGAAGCGCTCCTTCGCCCATGGCAAGAACGCCCGCCTCATCTCCTCCTACATGGCGCAGCTGCCAAAGCTGCTCGAGGTGGATGAGCATGTCGCCGCCGACGGCAGCAGGATGGAGCGGTGCAACTTCGCCGTGATGGGGGAAGAGAACATGGTGCTCAAGGCCGGACCACACGGCTACGAGCTCGACCTCGGCCTCGCCGCCGCCGTCGTCACCGTCGGGAAAATCTGGCAGACCAAACAACACCCAAGGCTCAAGAGGCTCTGCCTCTCCTTCGCTCTCTTCAAGCTTCTGCGCCGCCGGTTCGAGAACCTGCCGCCGGCGACCATGAAGGAGACCGACGAGTGCCGGGACCTCATCTTGGACGGCATGTGCAAGGATGCTCAGGCCACCGGCGACGTCCCGGCGGAGGTGGCGCTGTTCCAGGTGCTCAACGACGAGGTGAACTTCCTGGCCGAGTACTACCACTCCGTCCTCCCCGTGGTGCTCGCGAGCCCCTACTTCTTCGTCGTCAACTACCTCTGCTTCCCCGTCGTCGTGTTCGGCCTCTGCGTCATGACCATCGTCCTCTGCGGCAATGGCAACGTCTTGTACGCCTTCAAGAGCCTAACCAACGACAACTATGCCGTCTCATCCGGCATACTCTCGCTGACGAAATGCCTCTGGAAAAACGTCGTCAGGTCTCCGCTGGTGTTCTTCTCCATCGTCGACGTCTCCATCTGCTACCTCCTCTTCATCGTCGTCGTCTACGAGGAGGTGTGGGAGTTCGTCGTCTTCCTCCTCTCCAACTGGTTCATCGTCTCTCTGCTCTGCACCTTCTCCGCCAAGCCCCGCCGCCGCGAGAGCCCCACCTTCCGTGGCTCCGTCCGCTGCATCCTCTGGCTCCGCCGAAACCTCAGCCACTACCCTAGCCTCATCACCATCAAGCAGTTCACCGTCCTGAGCACATGCTGCCTGTCGCCGAGGTTGCCCACCGCCACGCTGCCCAGGCATGCGAAGCTCGCCATCCTAGAACGCTTCCGCGGCGGCGATCCTCTCAGCAACGGCGGCGCCGTGCTGACGTCGATGGGCGGTAGGCACCGGCGGTTCTCGCGGCTCTCGTGGGCGTGCCAGAGCGGAGCCGTCGCGGAGGTGATCCTCACCTGGCACATCGCCACCAGCCTCCTGGAGACGAAGCAGCAGCAGCAGCTTCCGACAAGTGCCAGCCGGAGCCGGAGGACGGCGGCGAGGCTGTCCAGATACTGCGCCTACCTCGTCGCCTTCCGGCCGGAGCTGCTGCCGGACGACCGGGAAGGCACGGAGCGCATCTACAAGGACCTGAAGAAGGGCATCAAGGCGGCGCTCGGCGGCGCACGGGGATACTACCTCTCGTCGGAGCGGAGCCGGCACGAGACGATCCGTGCGCTCCGGGTGGACGCCTCCGCCGCCGCCGACATGACGGTGCTCGAGAGGGGCGCCGTGCTGGGGAAGCAGCTGGTGGAGGACGACGAAGCCGGCGACGGCGCGGTGTGGGAGATGCTGGCCGACGTGTGGGTTGAGCTCGTCGTGTACGTGTCGCCGTCGCGCGCGGAGGAGCACGCCAGGGGGCACGAGGCGGCGCTGGCGCAGGGCAGCGAACTCGTGACGCTGCTCTGGGTGCTCGCCACGCACACCGGCATCGCCCGCCCGGACCACGACGGCGAAATCGACCAGCCGGCGGCGCCGGCATAG More
Protein seq		MTSVTSDLLQSCSETMISFVHNMTASYADKSNESSVVSTSVVMFILAAVFFNLNLFSGVSDVSAVLNPTVRIFLSSALNLFLPVMSYLFSEAKQAPLGVGDSTTTTRDAHSDDLSLLARVILTWMLLVELLRKKVEAILITTGMHVYSSLISHATSVAWLGNLVFFNLQAAGKKALFGVLWVLCAAKLVQRVAITEIGKRSFAHGKNARLISSYMAQLPKLLEVDEHVAADGSRMERCNFAVMGEENMVLKAGPHGYELDLGLAAAVVTVGKIWQTKQHPRLKRLCLSFALFKLLRRRFENLPPATMKETDECRDLILDGMCKDAQATGDVPAEVALFQVLNDEVNFLAEYYHSVLPVVLASPYFFVVNYLCFPVVVFGLCVMTIVLCGNGNVLYAFKSLTNDNYAVSSGILSLTKCLWKNVVRSPLVFFSIVDVSICYLLFIVVVYEEVWEFVVFLLSNWFIVSLLCTFSAKPRRRESPTFRGSVRCILWLRRNLSHYPSLITIKQFTVLSTCCLSPRLPTATLPRHAKLAILERFRGGDPLSNGGAVLTSMGGRHRRFSRLSWACQSGAVAEVILTWHIATSLLETKQQQQLPTSASRSRRTAARLSRYCAYLVAFRPELLPDDREGTERIYKDLKKGIKAALGGARGYYLSSERSRHETIRALRVDASAAADMTVLERGAVLGKQLVEDDEAGDGAVWEMLADVWVELVVYVSPSRAEEHARGHEAALAQGSELVTLLWVLATHTGIARPDHDGEIDQPAAPA
Function		-

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_06G0017500	OsMH63_06T0017500.1	Chr06	951279	954069	+	maker
CDS seq	ATGACGTCCGTGACCTCAGATTTGCTGCAGTCGTGTTCGGAAACCATGATTTCATTCGTCCACAACATGACGGCTTCCTACGCCGACAAGAGCAACGAGTCCTCCGTGGTGTCCACCTCCGTCGTCATGTTCATCCTCGCCGCCGTCTTCTTCAACCTCAACCTCTTCAGCGGCGTCTCCGACGTCAGCGCCGTGCTCAACCCCACCGTCCGCATCTTCCTCTCCAGCGCGCTCAACCTCTTCCTCCCCGTCATGTCCTACCTCTTCTCCGAGGCCAAGCAAGCGCCGCTCGGAGTCGGCGACTCCACTACCACCACCAGAGACGCCCACTCCGATGACCTCTCGCTGCTGGCGCGTGTCATCCTCACATGGATGCTCCTCGTCGAGCTCCTCCGCAAGAAGGTGGAGGCCATCCTCATCACCACCGGCATGCACGTCTACTCCAGCCTCATCAGTCACGCCACCAGCGTCGCCTGGCTGGGCAACCTCGTCTTCTTCAACCTCCAGGCCGCCGGCAAGAAGGCGCTGTTCGGCGTCCTCTGGGTGCTCTGCGCGGCCAAGCTGGTGCAGCGCGTCGCCATCACCGAGATCGGGAAGCGCTCCTTCGCCCATGGCAAGAACGCCCGCCTCATCTCCTCCTACATGGCGCAGCTGCCAAAGCTGCTCGAGGTGGATGAGCATGTCGCCGCCGACGGCAGCAGGATGGAGCGGTGCAACTTCGCCGTGATGGGGGAAGAGAACATGGTGCTCAAGGCCGGACCACACGGCTACGAGCTCGACCTCGGCCTCGCCGCCGCCGTCGTCACCGTCGGGAAAATCTGGCAGACCAAACAACACCCAAGGCTCAAGAGGCTCTGCCTCTCCTTCGCTCTCTTCAAGCTTCTGCGCCGCCGGTTCGAGAACCTGCCGCCGGCGACCATGAAGGAGACCGACGAGTGCCGGGACCTCATCTTGGACGGCATGTGCAAGGATGCTCAGGCCACCGGCGACGTCCCGGCGGAGGTGGCGCTGTTCCAGGTGCTCAACGACGAGGTGAACTTCCTGGCCGAGTACTACCACTCCGTCCTCCCCGTGGTGCTCGCGAGCCCCTACTTCTTCGTCGTCAACTACCTCTGCTTCCCCGTCGTCGTGTTCGGCCTCTGCGTCATGACCATCGTCCTCTGCGGCAATGGCAACGTCTTGTACGCCTTCAAGAGCCTAACCAACGACAACTATGCCGTCTCATCCGGCATACTCTCGCTGACGAAATGCCTCTGGAAAAACGTCGTCAGGTCTCCGCTGGTGTTCTTCTCCATCGTCGACGTCTCCATCTGCTACCTCCTCTTCATCGTCGTCGTCTACGAGGAGGTGTGGGAGTTCGTCGTCTTCCTCCTCTCCAACTGGTTCATCGTCTCTCTGCTCTGCACCTTCTCCGCCAAGCCCCGCCGCCGCGAGAGCCCCACCTTCCGTGGCTCCGTCCGCTGCATCCTCTGGCTCCGCCGAAACCTCAGCCACTACCCTAGCCTCATCACCATCAAGCAGTTCACCGTCCTGAGCACATGCTGCCTGTCGCCGAGGTTGCCCACCGCCACGCTGCCCAGGCATGCGAAGCTCGCCATCCTAGAACGCTTCCGCGGCGGCGATCCTCTCAGCAACGGCGGCGCCGTGCTGACGTCGATGGGCGGTAGGCACCGGCGGTTCTCGCGGCTCTCGTGGGCGTGCCAGAGCGGAGCCGTCGCGGAGGTGATCCTCACCTGGCACATCGCCACCAGCCTCCTGGAGACGAAGCAGCAGCAGCAGCTTCCGACAAGTGCCAGCCGGAGCCGGAGGACGGCGGCGAGGCTGTCCAGATACTGCGCCTACCTCGTCGCCTTCCGGCCGGAGCTGCTGCCGGACGACCGGGAAGGCACGGAGCGCATCTACAAGGACCTGAAGAAGGGCATCAAGGCGGCGCTCGGCGGCGCACGGGGATACTACCTCTCGTCGGAGCGGAGCCGGCACGAGACGATCCGTGCGCTCCGGGTGGACGCCTCCGCCGCCGCCGACATGACGGTGCTCGAGAGGGGCGCCGTGCTGGGGAAGCAGCTGGTGGAGGACGACGAAGCCGGCGACGGCGCGGTGTGGGAGATGCTGGCCGACGTGTGGGTTGAGCTCGTCGTGTACGTGTCGCCGTCGCGCGCGGAGGAGCACGCCAGGGGGCACGAGGCGGCGCTGGCGCAGGGCAGCGAACTCGTGACGCTGCTCTGGGTGCTCGCCACGCACACCGGCATCGCCCGCCCGGACCACGACGGCGAAATCGACCAGCCGGCGGCGCCGGCATAG More
Protein seq	MTSVTSDLLQSCSETMISFVHNMTASYADKSNESSVVSTSVVMFILAAVFFNLNLFSGVSDVSAVLNPTVRIFLSSALNLFLPVMSYLFSEAKQAPLGVGDSTTTTRDAHSDDLSLLARVILTWMLLVELLRKKVEAILITTGMHVYSSLISHATSVAWLGNLVFFNLQAAGKKALFGVLWVLCAAKLVQRVAITEIGKRSFAHGKNARLISSYMAQLPKLLEVDEHVAADGSRMERCNFAVMGEENMVLKAGPHGYELDLGLAAAVVTVGKIWQTKQHPRLKRLCLSFALFKLLRRRFENLPPATMKETDECRDLILDGMCKDAQATGDVPAEVALFQVLNDEVNFLAEYYHSVLPVVLASPYFFVVNYLCFPVVVFGLCVMTIVLCGNGNVLYAFKSLTNDNYAVSSGILSLTKCLWKNVVRSPLVFFSIVDVSICYLLFIVVVYEEVWEFVVFLLSNWFIVSLLCTFSAKPRRRESPTFRGSVRCILWLRRNLSHYPSLITIKQFTVLSTCCLSPRLPTATLPRHAKLAILERFRGGDPLSNGGAVLTSMGGRHRRFSRLSWACQSGAVAEVILTWHIATSLLETKQQQQLPTSASRSRRTAARLSRYCAYLVAFRPELLPDDREGTERIYKDLKKGIKAALGGARGYYLSSERSRHETIRALRVDASAAADMTVLERGAVLGKQLVEDDEAGDGAVWEMLADVWVELVVYVSPSRAEEHARGHEAALAQGSELVTLLWVLATHTGIARPDHDGEIDQPAAPA More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_06G0017500	OsMH63_06T0017500.2	Chr06	951279	954069	+	maker
CDS seq	ATGACGTCCGTGACCTCAGATTTGCTGCAGTCGTGTTCGGAAACCATGATTTCATTCGTCCACAACATGACGGCTTCCTACGCCGACAAGAGCAACGAGTCCTCCGTGGTGTCCACCTCCGTCGTCATGTTCATCCTCGCCGCCGTCTTCTTCAACCTCAACCTCTTCAGCGGCGTCTCCGACGTCAGCGCCGTGCTCAACCCCACCGTCCGCATCTTCCTCTCCAGCGCGCTCAACCTCTTCCTCCCCGTCATGTCCTACCTCTTCTCCGAGGCCAAGCAAGCGCCGCTCGGAGTCGGCGACTCCACTACCACCACCAGAGACGCCCACTCCGATGACCTCTCGCTGCTGGCGCGTGTCATCCTCACATGGATGCTCCTCGTCGAGCTCCTCCGCAAGAAGGTGGAGGCCATCCTCATCACCACCGGCATGCACGTCTACTCCAGCCTCATCAGTCACGCCACCAGCGTCGCCTGGCTGGGCAACCTCGTCTTCTTCAACCTCCAGGCCGCCGGCAAGAAGGCGCTGTTCGGCGTCCTCTGGGTGCTCTGCGCGGCCAAGCTGGTGCAGCGCGTCGCCATCACCGAGATCGGGAAGCGCTCCTTCGCCCATGGCAAGAACGCCCGCCTCATCTCCTCCTACATGGCGCAGCTGCCAAAGCTGCTCGAGGTGGATGAGCATGTCGCCGCCGACGGCAGCAGGATGGAGCGGTGCAACTTCGCCGTGATGGGGGAAGAGAACATGGTGCTCAAGGCCGGACCACACGGCTACGAGCTCGACCTCGGCCTCGCCGCCGCCGTCGTCACCGTCGGGAAAATCTGGCAGACCAAACAACACCCAAGGCTCAAGAGGCTCTGCCTCTCCTTCGCTCTCTTCAAGCTTCTGCGCCGCCGGTTCGAGAACCTGCCGCCGGCGACCATGAAGGAGACCGACGAGTGCCGGGACCTCATCTTGGACGGCATGTGCAAGGATGCTCAGGCCACCGGCGACGTCCCGGCGGAGGTGGCGCTGTTCCAGGTGCTCAACGACGAGGTGAACTTCCTGGCCGAGTACTACCACTCCGTCCTCCCCGTGGTGCTCGCGAGCCCCTACTTCTTCGTCGTCAACTACCTCTGCTTCCCCGTCGTCGTGTTCGGCCTCTGCGTCATGACCATCGTCCTCTGCGGCAATGGCAACGTCTTGTCTCCGCTGGTGTTCTTCTCCATCGTCGACGTCTCCATCTGCTACCTCCTCTTCATCGTCGTCGTCTACGAGGAGGTGTGGGAGTTCGTCGTCTTCCTCCTCTCCAACTGGTTCATCGTCTCTCTGCTCTGCACCTTCTCCGCCAAGCCCCGCCGCCGCGAGAGCCCCACCTTCCGTGGCTCCGTCCGCTGCATCCTCTGGCTCCGCCGAAACCTCAGCCACTACCCTAGCCTCATCACCATCAAGCAGTTCACCGTCCTGAGCACATGCTGCCTGTCGCCGAGGTTGCCCACCGCCACGCTGCCCAGGCATGCGAAGCTCGCCATCCTAGAACGCTTCCGCGGCGGCGATCCTCTCAGCAACGGCGGCGCCGTGCTGACGTCGATGGGCGGTAGGCACCGGCGGTTCTCGCGGCTCTCGTGGGCGTGCCAGAGCGGAGCCGTCGCGGAGGTGATCCTCACCTGGCACATCGCCACCAGCCTCCTGGAGACGAAGCAGCAGCAGCAGCTTCCGACAAGTGCCAGCCGGAGCCGGAGGACGGCGGCGAGGCTGTCCAGATACTGCGCCTACCTCGTCGCCTTCCGGCCGGAGCTGCTGCCGGACGACCGGGAAGGCACGGAGCGCATCTACAAGGACCTGAAGAAGGGCATCAAGGCGGCGCTCGGCGGCGCACGGGGATACTACCTCTCGTCGGAGCGGAGCCGGCACGAGACGATCCGTGCGCTCCGGGTGGACGCCTCCGCCGCCGCCGACATGACGGTGCTCGAGAGGGGCGCCGTGCTGGGGAAGCAGCTGGTGGAGGACGACGAAGCCGGCGACGGCGCGGTGTGGGAGATGCTGGCCGACGTGTGGGTTGAGCTCGTCGTGTACGTGTCGCCGTCGCGCGCGGAGGAGCACGCCAGGGGGCACGAGGCGGCGCTGGCGCAGGGCAGCGAACTCGTGACGCTGCTCTGGGTGCTCGCCACGCACACCGGCATCGCCCGCCCGGACCACGACGGCGAAATCGACCAGCCGGCGGCGCCGGCATAG More
Protein seq	MTSVTSDLLQSCSETMISFVHNMTASYADKSNESSVVSTSVVMFILAAVFFNLNLFSGVSDVSAVLNPTVRIFLSSALNLFLPVMSYLFSEAKQAPLGVGDSTTTTRDAHSDDLSLLARVILTWMLLVELLRKKVEAILITTGMHVYSSLISHATSVAWLGNLVFFNLQAAGKKALFGVLWVLCAAKLVQRVAITEIGKRSFAHGKNARLISSYMAQLPKLLEVDEHVAADGSRMERCNFAVMGEENMVLKAGPHGYELDLGLAAAVVTVGKIWQTKQHPRLKRLCLSFALFKLLRRRFENLPPATMKETDECRDLILDGMCKDAQATGDVPAEVALFQVLNDEVNFLAEYYHSVLPVVLASPYFFVVNYLCFPVVVFGLCVMTIVLCGNGNVLSPLVFFSIVDVSICYLLFIVVVYEEVWEFVVFLLSNWFIVSLLCTFSAKPRRRESPTFRGSVRCILWLRRNLSHYPSLITIKQFTVLSTCCLSPRLPTATLPRHAKLAILERFRGGDPLSNGGAVLTSMGGRHRRFSRLSWACQSGAVAEVILTWHIATSLLETKQQQQLPTSASRSRRTAARLSRYCAYLVAFRPELLPDDREGTERIYKDLKKGIKAALGGARGYYLSSERSRHETIRALRVDASAAADMTVLERGAVLGKQLVEDDEAGDGAVWEMLADVWVELVVYVSPSRAEEHARGHEAALAQGSELVTLLWVLATHTGIARPDHDGEIDQPAAPA More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.8304925	0	0

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_06g0120200	RBH	0.568855	0.194996	0.0
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os06g02960	RBH	0.384689	0.131151	0.0
Nipponbare \| IRGSP 1.0 \| RAP-db	Os06g0120200	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_06g0001480	RBH	0.178305	0.0	2.026215
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_06g0001430	RBH	0.0	0.0	0.128645
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_06g0001390	RBH	0.828050	0.0	1.041442
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_06g0001390	RBH	0.028660	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_06g0001400	RBH	0.000000	0.0	5.009130
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_06G0018300	RBH	0.455293	0	0.0385895
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_06g0001440	RBH	0.466704	0.0	0.183095
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_06G0019200	RBH	1.303677	0	0
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_06g0001410	RBH	0.120037	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_06g0001410	RBH	0.358492	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_06g0001370	RBH	0.949890	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_06g0001420	RBH	0.357066	0.0	0.198200
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_06g0001280	RBH	0.313714	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_06G001340	RBH	0.184886	0.0	0.469714
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_06g0001410	RBH	0.104084	0.000000	0.195810

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.