Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_05G0181700 OGI:05031940 | 16/16 Minghui 63 | MH63RS3 | HZAU Chr05:12414311-12418038
Gene Symbol -
DNA seq

ATGTATAATTGGAGTACATGCATTTGTGATAAGTTTCCTTGGTAAATGCAATGTGTTCTTCATCATTGTCAATTATTCTAGGAGGCCTTGATATGTCAGTTACCGGATTCATGGCCATTGTTCCACACCCTAGGAATTATTTGAAGGGCAATATTTTTATGAAGCTTAAAGATTGAATTTGAATCCATCTGCCCTGGCTTGAAGGTGAACATGATTTTATTTTTAAGATTGCATTTTAGTTACTCTTAACATACTCCAGTTACTCAATCATATACATATCTGTTTCACACATGATCTATTTATGCACTTTTGTCGCGTTTAGTCTAAAACGATGCTGTCAAATTTTAAAAGGGCATTGCTTTACTAAATTGTGGTGTATGTAGTATTAGCATGTCAAATTACATTTATGCGTTTCTTGCTTCCCGACCATATGTCAAATAACTGAAAGTGTTAGTACTTGAGTTAACCCTTTTTTCATACTTATGCCATATAGCACCCTAATTTTGTTCATGCGATCAGAGGATAAAATATTAAGAGGATTCTTTAGTATGGCTCATTTTATTGTTTCTAAGTTTAGGGTTATTCAGACAGATAACACTTTAGCTTTCTATATAATATTGGTTTTACAACTTTGTCTCTCGAAGGTTTTTTTTTTTTGGAACGTATTGATGGTTTTCCTCATAATATGCTCTTGAAATCCATCTTGTCCCTGTTCAATGCAGTACAATCCAAATATTATGGTATATCAACAGCAGCTTCAGTCTGGGACAGAGCAATACAAGGTCCTCCCTGTAAGTTTAGTATGAACAGTGCAATCAAATTTATAAGTCTTCCCTATCAAAATTTCAGTATAGCCCCATTTGTGCTGGTCTGATTAATTATCTTTGAAATGATATTCTGCTTTGAGATTAAATTACATGTAACTAACTTGCTTTGATACCTTCACAAGTCGTGAAATGGTTTAGCTGTACTTCCATGTTTGGGTTACTTGTGTAATATTTGGTAGGCTATAAACCCATTTGTTGTGCCTTTTTTTTTATTATATTGCTCAATAAAGATAGTCAATCAATGTGTTGTAAATAATAAGGGAATTGGCTTGTATCATTTGTTTCTTCTATGCTCAAGATCCTGAACTGTTGTGCATGTATCATTTGTTGCCACTGAGTCATTATTTGGATTCATCAGAGAACATCCATCATTTTGATTACCAGACTATGGACTGATTTATGCCATGCTTGCTAATTGATAGAGGGACATTTGCTACTTCTGCATATAGGACAGATAATTAAACTTTTTGTGCGCTGAAATGCTCTTTGTACGGTGAGTATATGACACGCTAAAGATGACTGAAATTAAACTTAGGATACTTCTGTTTGCAACTATAAGACATGAGTTCTTTTGCTATATTTCTGGATAGGTGGAGTAGGTTTTATTTTTAAGAGTTTGGTCTGTGGATTTTCGTCTGCCGATGAGTCTCCAATGTTTGATACAGTGTAGCCCATGAGCAGCTGCTGTTTTCTGATTTTTTTTTTCAAGGTAATGTAGCTGCTTTGTGTATATGTGTTTGTCCAATAGTGCCTGCCATTCCCTTTGGATGGTTTGCATTGCAGATGAATTACGATTGCCATCTCATGTTGCTATGGCACTATGCTAAGTGAATCTTGTTCACTTCCTTTATTCAAGCACAAGGAATTTATGTATGTTCATTATGAAATCTGTAAGTTAGATAATGAACATACATAAATTCACTAGCTGTTGTGTTATCACATTGATTGTAACATCAAAACAATCAACTACTAGAAAATACTAAAGTTTCTAAATGGTTATCAGAACACACTGGAATTTTTTTATGGGCTTACTGTTCCACACTGCATTCCTTCACAATTGAAGTTTGCCATCTCTTATGGCACTCTTTTAGCTTGATAATCTGAAAAAATAGATGACTAAATCTATAGTTTCCTTTTATCCAGGAGGAGATTTGGCTTTTCAGTATGCTTCAGTAAGGATTTAGCAGATGGCAATCTTTGCTGGTATGTAGAGTATTTCATTAGGCTAATCGCCTATTTGTTGATGATCATAATTGGCACATAAATTGATAAATTTGTATTGATGATTCTACTCATTTTAAATGTTATATGGTAGCATCCTTTGTTTGATAAGGAAAAATCAGTGTTCTTTGCATATTCAATTAGAGAAGAGCATGAATACTGTTGTTACTCTAGGAAGAATGCTTATATTATGAAAGGAGCGCTAACATTGCGTTGAGAAAACAACAGGTGATGTTATCTTTTTCTGATTTCCTTATATTGCAGTCTGTTAGCAAGGAGCATCAAGAGTTCCTCGGCCTTGTCGACAAAGAGGTATAATGTGAACTTGTAAATTGATATTAGAGTGACAATTATTCATGCAGTTATCTTCCATTTTTATTGCAAATACTTGGGAGGGCTCAATAACTCTTGGTCTTTGTTGAATGCAGATTGAATTATATTATATACTAATGGAATTCCGCCGGCGGTGTGAGGCCCACTCAGAGTAGGATTTGGAGGGTGCAGAACTGTTTTTGCATTGCCAATGAAAGGAGGAAGACCGCCTCAAAGAGCCTTGTCCCCATCCACCAACATGGTCATGATAATCGTTGACATCGACCAAGATCTCTCCAGGGTAAGTAGAACAGCACTAAAATTAGGATTAGCATTTCTAGACACCATGTTATTTCAGAAATTGATTAGTTGGAATCTTGTATTCATTTTGCTAGCCTGAGTGCCTAACTTAGTGGAAATATATTGGAAAAGTTTCTCCATGGCAGATTGAGGCTGTTATTTCCTGTAGATTTAGGTTTCGCTGTAAATACTGAACAATTATTGCAATTTTCTATTTGTATTGAGTACTTGGGTGGTTCTTTCTATCAACCAAATCAATTTTTATTCATCAGTGTAGACTCTTTGAACTGCAATTGTTGTGCTGCTGATATGTGTTATGTAGGCTGCAGCAGAAGGTCAATTTTCCCTTTTGTGAGGTGCCATAATTTTGAAAATATGTTAATTTTGTCAATTGCTTGATATTAAGTGGAGTATCTCCTTTGTATGCACCAACCAATTTTGGAGCTCCAGACAATGAAACGATAGCTTCATAATATCCATGAAAAAGTGCTATTGGATGAATCCAGTAAAGATGTGTTTTCTCTGGCATTTTGAATATTGAAGTGTGCTGATGACTTTGTAATTACTAATAATGATGCAATGCATAAATTCTATGGCCGGTTCTGTTACTTCTTTTTATTTGGACGTAATTTGCTTGAAAGATTTTTGATGTGGCTAAAGGAGAAATTTTTTTAAGGCATTTGGTTTCTCAGGAGTTTAGGAGTTGGAACCATGCAAACATGCCTCATGCTAATGTCTTCCTGAGCTTTCAGAAATCGAAGTTATTTCTAGCTTAAGATGATGTTGGAGCTGATCCTGGTGCTGTTAGAGAGGCCAATCTATTCAGGTCCAGCAGTTTACATCAAGATGATGTTCTTTCTAGCGATGCATGTAGTGACCATTGATGTTTCGATTGCTTGAGGCGACCCTCTTTGTAATTGTGAAAAATGTGGTGTTATGAAACAAAAATATAGATTTACATCCAGGAGATAAAATTATTTTATTCTGTATTTTAGAGTAACACGGTATAGCTACTGGTGCTATCCATCTCTGGACCTGATTTTTTTTCTGCATGATTTAAAATTTGTT

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CDS seq

ATGCTCTTGAAATCCATCTTGTCCCTGTTCAATGCAGTACAATCCAAATATTATGGTATATCAACAGCAGCTTCAGTCTGGGACAGAGCAATACAAGGTCCTCCCTTATGCTTCAGTAAGGATTTAGCAGATGGCAATCTTTGCTGGAGCGCTAACATTGCGTTGAGAAAACAACAGGTGATGTTATCTTTTTCTGATTTCCTTATATTGCAGTCTGTTAGCAAGGAGCATCAAGAGTTCCTCGGCCTTGTCGACAAAGAGGCTGCAGCAGAAGGTCAATTTTCCCTTTTGTGA

Protein seq

MLLKSILSLFNAVQSKYYGISTAASVWDRAIQGPPLCFSKDLADGNLCWSANIALRKQQVMLSFSDFLILQSVSKEHQEFLGLVDKEAAAEGQFSLL

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_05G0181700 OsMH63_05T0181700-mRNA-1 Chr05 12414311 12418038 + maker
CDS seq

ATGTATAATTGGAGTACATGCATTTGTGATAAGTTTCCTTGCTTAAAGATTGAATTTGAATCCATCTGCCCTGGCTTGAAGTACAATCCAAATATTATGGTATATCAACAGCAGCTTCAGTCTGGGACAGAGCAATACAAGGTCCTCCCTTCTGTTAGCAAGGAGCATCAAGAGTTCCTCGGCCTTGTCGACAAAGAGATTGAATTATATTATATACTAATGGAATTCCGCCGGCGGTGTGAGGCCCACTCAGAGTAG

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Protein seq

MYNWSTCICDKFPCLKIEFESICPGLKYNPNIMVYQQQLQSGTEQYKVLPSVSKEHQEFLGLVDKEIELYYILMEFRRRCEAHSE

Gene Transcript Chromosome Start End Strand Source
OsMH63_05G0181700 OsMH63_05T0181700-mRNA-2 Chr05 12414311 12417325 + maker
CDS seq

ATGTATAATTGGAGTACATGCATTTGTGATAAGTTTCCTTGCTTAAAGATTGAATTTGAATCCATCTGCCCTGGCTTGAAGTACAATCCAAATATTATGGTATATCAACAGCAGCTTCAGTCTGGGACAGAGCAATACAAGGTCCTCCCTTCTGTTAGCAAGGAGCATCAAGAGTTCCTCGGCCTTGTCGACAAAGAGGCTGCAGCAGAAGGTCAATTTTCCCTTTTGTGA

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Protein seq

MYNWSTCICDKFPCLKIEFESICPGLKYNPNIMVYQQQLQSGTEQYKVLPSVSKEHQEFLGLVDKEAAAEGQFSLL

Gene Transcript Chromosome Start End Strand Source
OsMH63_05G0181700 OsMH63_05T0181700-mRNA-3 Chr05 12414996 12417325 + maker
CDS seq

ATGCTCTTGAAATCCATCTTGTCCCTGTTCAATGCAGTACAATCCAAATATTATGGTATATCAACAGCAGCTTCAGTCTGGGACAGAGCAATACAAGGTCCTCCCTTATGCTTCAGTAAGGATTTAGCAGATGGCAATCTTTGCTGGAGCGCTAACATTGCGTTGAGAAAACAACAGGTGATGTTATCTTTTTCTGATTTCCTTATATTGCAGTCTGTTAGCAAGGAGCATCAAGAGTTCCTCGGCCTTGTCGACAAAGAGGCTGCAGCAGAAGGTCAATTTTCCCTTTTGTGA

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Protein seq

MLLKSILSLFNAVQSKYYGISTAASVWDRAIQGPPLCFSKDLADGNLCWSANIALRKQQVMLSFSDFLILQSVSKEHQEFLGLVDKEAAAEGQFSLL

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.9794665 3.5982825 4.3012315

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0010180 RBH 0.096057 3.794307 3.242020
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0010230 RBH 0.142479 1.203807 1.625638
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0010140 RBH 0.083793 0.890493 4.146429
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0010230 RBH 0.000000 0.034136 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0010310 RBH 2.010923 2.571162 3.547650
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0010160 RBH 0.000000 0.345753 1.003557
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0010130 RBH 0.052810 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0010070 RBH 0.315770 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0010180 RBH 1.360910 9.101255 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0010220 RBH 0.106301 0.735688 0.583782
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0010210 RBH 0.0 2.319721 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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