Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_05G0073000 OGI:05013510 | 16/16 Minghui 63 | MH63RS3 | HZAU Chr05:4971317-4975375
Gene Symbol -
DNA seq

AGTGTTATGAAACAACAGGGTGATCTCATCCATATAAAAGGATGGATCGCAACACCGAAGGCAACCGCGCCTTCCTTAGGCGCTCCTTGGCAACGGACGCGATGGTTGGGAACCATCGCGTCTCCTGTTGCCACCCCTTCCCCATCTATATATTTACCGCATTAATCAATAAAGATTCCGCTCATTTCATTCCCTACATTCTTGTGTTAAATTTTCTCTCACTCAATCTCTCTCGCTCAATCAATTCTATCCACTTTCAACACATATTATGAAGCTCAACAACACATATGTACACAGAGTAACATACTACTACATTCAGACTTGATCGGAACTCACAGAACTACACCAGAACTCACAGAACTACACCAATGGTTTCTCTAGAGACAACAGGACAACCGGAGAGGAGGAAATATCACGGCAGGAACGTTCCTTGATTCTACCACTGGAAAGTTCAAAGTTTCAAATAATGTTTTTGTAAGGTGACTAACCAGAGGAACACAAGGACGATATTCTAGCTTGCAGTGTTCTTATAATGCTCATGTAGCCCGTTTAGTTTTTCTTCTCCTATAAATCCTTGTAGGAGAACGAGTATCTCCAGCATCGGTATTGTTGCTATTCTGATCAGGGTCATTCACATCTTGCTCAGGTTGAGAAGTATTTGATGTCACACTTGCTTCCGCAAGTTCTGTTCTCAGATATCCACTTGCGCTGATCTGCCGCCTCAGTCTCAATATCTCACCTTTTGCTGTGGCCAATTCCTCTTCAAGTTTCTTAGACCTTATTTCAAAATTCTCTCTCTCCGTTCCAAGCATTTTTATAAGATTCTGAGCATCCTCCATATCTTTCTGAGCTTCCATTGTACTTCTCTTTTGTTGCTCAAGAGCCTCTGAAAGCATCTCTTTCTTTTCTTCAATAGAAGAAATCCTAGAATTTGAGGTATCCAGCCTCTCAGACAGGAACTGTGTACTCTCATCCACCTCTTTTTGTGAATTGGTCACCTCATCAAGGTCTGCTTGAAGAGCTTGTCGTGCTTCAGATTCTACAATCGATTGTTCCACCAATGCCTCAAGCTCCCTGTTTAGAGTAGCATTAATTTTACGTTCTCTAACAAGCTCATCTGTTGCAGACTCTAACTTCTTGTATGCATCCAGCAGTTCTTTATTAAGGTCATCGCGTGCTTCCATAGTTGACACTAATTGATTAGAAGTGACATCAAGCTTTTCTTGTGTCTTTTGAAGTACATCCCTTACTGATGCCAATTCATCTGAAAGAACTTTAGAAACTGCTTCTGCCTCTGCAATTTTGTTAGACAGAACCTGTTTCGTTATATTGGACTCGTCTGTCAACTTTGTAATCTGGGTTATCAATTGCTGATTTGATATCTTCACTCTATTAAGCTCTTCAGAGAGGTTGAACACCTTGTCTCTGTAATCTGTTAATGCCCCTTCAGTGGACTGAAGAATCTCTGATAATTTCTTATGAGCTTCAACCTCATTATCTAGCATAGTTCTGTTGGTGTCCAATTCATTGTTCAGTTCAGCAATTATAATTTTGTTCTTACTAGTGTCACTTAATGTAGCAGATAGTTTTTCTTCAAGCTGGTTGAGCAGGTTATCTTTCTCAATCAGTAGTTCAGAATCACAAGATGCCCTCATCTCAGAAGAAGCTGCAAGGTCTGCATACTGTTTCTTTAGTTCACTTATCTTTTCTTCTGCTCCAGTTTTTGCAGTGTATAGTGTTTGGACTTCCTTATTCAATGAATCAATTGAAGACATCTTTGAGTTCAGATCATCTTTAGTTGCAGAATAATCCTCCTCCAGTTGCTCTATTTTAGAATTTGCATACTCTAGGCTTGCTTCGGTTTCATTGTAGATCAACTGCAGCTTCTGATAGTCTTCTTCCTTGGAAGAGAGTGATGAGCTTAGTTCCCTGATGGCTTCCTCCTTGGAATTCACCTCTTGGCTGAGCAGATTTACCTTGTCCTGTAAACTATCAAGTGCTTCCAACTTCTCTCTCAATTTGCCTTCAAACACATGTTTGTCGTCTTCTGCTTGTGCAATGCTACTCTTAAGTCGATGTATCTCTTGTTTAAGCTGCTCAACTAATTCTTTCTCCCTTCTCACTTCCTCGTTTAAAGATGTTACTGTTCTCTTAGTCAAAGTCAATTGATCCAGAAGGGAAGCTTCCTTCTCCTGGAACATCCTAGCCTGTTTCTTTTGTTCTGCATGTTCATTCCATATCTGTTTCTCATAGTTTTCCCTAAGCATGGACATTGCTGCCTCATTTTCAGCCAACTTGATCTCCATCTGGGCAAACATAACGTTCAACTTATTAATTAGGGAAAATATTTTTCTAAAAATCCGATTTTCACAATATGTACATTCCAATATAACACATAATCTCAATAAATGAAGGCCCTCATAGTATATCTGAAATCTATATTAATTCATTGACTATAAAAGAGTCATGCAGATATTATTTCCTAAGGTTCATAGTTCATACTGATTTGTCCTACACTGTTACCATGCTATACAAAATTGAAGCTGCATAGTAACAGGTATATGCATCCAGAAACAGCAGTGTGAAAGAACTAGGAGCATGCTATATTATGCTCTGCGGTGAAGGAAAATAAATTACCAAATTAACACATGTCTGTATGTTTGATCAAGACTATTATCAGAACACCAGAAAATTAGCATAATTTTCTATTGAAACAGTGACCAAAGAAAGTCAACCAATTTTCAACTATGGATACTATTACTGTCTACAGAGTTAACATCATAATTACTACATCTCCAAGTGCTAGGGGAAACTAAACAAAACAAATGAATAGTGGTCCGAAGGTGTCCAAATTTGTAACTGAAGAAAAGATAGATGCTATCTTGTGTGTGCAGCATGGTGATATCTCAAGGTAACATGATGGTGTACAAAATATTTCTATAAGCATATAAAATCTGGGATGACAAATAATAGCTAACAATAATATAGCAGAAGTAAAATAACTCTAAGATATGCTGACTGAAAGGATGGCAGATGGCATACAGTTGAGACGGTAGATTGCAACGCCTCTTTTTCCCTTTGAGAAGCACCAAAAAGTCCAGCAAAAACACCAGAAGCAATAACTGCGATTGCATTCAGAAGACCTGCAAGTGGATTCACTGCAGGTGGTACTTTCACCTCAGCCAGAGATTCCTCAGCCGAAGGTTCTTCAGGTTGAGTCTCCTCAGTCTTCGCAGTGTCTATTCTATCTGCAAAAAAACAGTGTAACCAAATTTGTCGTGTGTCAGATCATCACAAGGTATAATGCAAACCATTTGACTGATAAAGCAAACTTATGTTTAACACAAATGCAAGGAGATGAACAGAATGCCACATATGTGCACAATCAGAAGTGTGTCACTGAGGCAAAGAATGATTTCGATGTGTTATGGAACAGGTCAGTTCTGGTACAAAACTAAATACAGGATTAAGTTGCCAACTGGGTAAGGTGTGCGCCTAGCGTGTTTGCTGTGTGGCCATAGGAGCATTGCCTTGTTGGGATGGAGAACCATTGGAACGACCAATGCATCAGATAAGTGAATCATCGGAGTTCCCCCATCTTGTTCCCTAGATCGATTCCCTTATCTAGCTTTGATTCAATCCTCTCCAAATCACACTAACTACCACAATCTGTGAATCCTGGTCACCAGAATGCCCGCCAACTAGTCGTGATCACATCATACACGAACTGACCAAAAACAAATAGCCGAAATAACAAAATTCCAGAACTGGGATTAATCTGCCATTATGGGTTAGTAGCAACTCACCAGTGACGAGATCCACCGTCGTCGTCGACGGCGGTCGCGCCGCGGCCGCCGCGAAGGCGGCGTCACGCAGGCGGAGGAGCGGGAGCACCGAGACGCCGACCAGGAGCACGGCCCTCCTCCCCGCCGCCAGCGCCGACGGCGACGGGGAGCAGGCGGCGGCGACATGGCCCGCGCGCGGGCGGCGGCGGGACATGACGAGCGAGAGGCGCGGGTGCGGCGGCGGCGGCGAGAGGAGGAGGTGGTGGTAGGCCAT

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CDS seq

ATGGCCTACCACCACCTCCTCCTCTCGCCGCCGCCGCCGCACCCGCGCCTCTCGCTCGTCATGTCCCGCCGCCGCCCGCGCGCGGGCCATGTCGCCGCCGCCTGCTCCCCGTCGCCGTCGGCGCTGGCGGCGGGGAGGAGGGCCGTGCTCCTGGTCGGCGTCTCGGTGCTCCCGCTCCTCCGCCTGCGTGACGCCGCCTTCGCGGCGGCCGCGGCGCGACCGCCGTCGACGACGACGGTGGATCTCGTCACTGATAGAATAGACACTGCGAAGACTGAGGAGACTCAACCTGAAGAACCTTCGGCTGAGGAATCTCTGGCTGAGGTGAAAGTACCACCTGCAGTGAATCCACTTGCAGGTCTTCTGAATGCAATCGCAGTTATTGCTTCTGGTGTTTTTGCTGGACTTTTTGGTGCTTCTCAAAGGGAAAAAGAGGCGTTGCAATCTACCGTCTCAACTATGGAGATCAAGTTGGCTGAAAATGAGGCAGCAATGTCCATGCTTAGGGAAAACTATGAGAAACAGATATGGAATGAACATGCAGAACAAAAGAAACAGGCTAGGATGTTCCAGGAGAAGGAAGCTTCCCTTCTGGATCAATTGACTTTGACTAAGAGAACAGTAACATCTTTAAACGAGGAAGTGAGAAGGGAGAAAGAATTAGTTGAGCAGCTTAAACAAGAGATACATCGACTTAAGAGTAGCATTGCACAAGCAGAAGACGACAAACATGTGTTTGAAGGCAAATTGAGAGAGAAGTTGGAAGCACTTGATAGTTTACAGGACAAGGTAAATCTGCTCAGCCAAGAGGTGAATTCCAAGGAGGAAGCCATCAGGGAACTAAGCTCATCACTCTCTTCCAAGGAAGAAGACTATCAGAAGCTGCAGTTGATCTACAATGAAACCGAAGCAAGCCTAGAGTATGCAAATTCTAAAATAGAGCAACTGGAGGAGGATTATTCTGCAACTAAAGATGATCTGAACTCAAAGATGTCTTCAATTGATTCATTGAATAAGGAAGTCCAAACACTATACACTGCAAAAACTGGAGCAGAAGAAAAGATAAGTGAACTAAAGAAACAGTATGCAGACCTTGCAGCTTCTTCTGAGATGAGGGCATCTTGTGATTCTGAACTACTGATTGAGAAAGATAACCTGCTCAACCAGCTTGAAGAAAAACTATCTGCTACATTAAGTGACACTAGTAAGAACAAAATTATAATTGCTGAACTGAACAATGAATTGGACACCAACAGAACTATGCTAGATAATGAGGTTGAAGCTCATAAGAAATTATCAGAGATTCTTCAGTCCACTGAAGGGGCATTAACAGATTACAGAGACAAGGTGTTCAACCTCTCTGAAGAGCTTAATAGAGTGAAGATATCAAATCAGCAATTGATAACCCAGATTACAAAGTTGACAGACGAGTCCAATATAACGAAACAGGTTCTGTCTAACAAAATTGCAGAGGCAGAAGCAGTTTCTAAAGTTCTTTCAGATGAATTGGCATCAGTAAGGGATGTACTTCAAAAGACACAAGAAAAGCTTGATGTCACTTCTAATCAATTAGTGTCAACTATGGAAGCACGCGATGACCTTAATAAAGAACTGCTGGATGCATACAAGAAGTTAGAGTCTGCAACAGATGAGCTTGTTAGAGAACGTAAAATTAATGCTACTCTAAACAGGGAGCTTGAGGCATTGGTGGAACAATCGATTGTAGAATCTGAAGCACGACAAGCTCTTCAAGCAGACCTTGATGAGGTGACCAATTCACAAAAAGAGGTGGATGAGAGTACACAGTTCCTGTCTGAGAGGCTGGATACCTCAAATTCTAGGATTTCTTCTATTGAAGAAAAGAAAGAGATGCTTTCAGAGGCTCTTGAGCAACAAAAGAGAAGTACAATGGAAGCTCAGAAAGATATGGAGGATGCTCAGAATCTTATAAAAATGCTTGGAACGGAGAGAGAGAATTTTGAAATAAGGTCTAAGAAACTTGAAGAGGAATTGGCCACAGCAAAAGGTGAGATATTGAGACTGAGGCGGCAGATCAGCGCAAGTGGATATCTGAGAACAGAACTTGCGGAAGCAAGTGTGACATCAAATACTTCTCAACCTGAGCAAGATGTGAATGACCCTGATCAGAATAGCAACAATACCGATGCTGGAGATACTCGTTCTCCTACAAGGATTTATAGGAGAAGAAAAACTAAACGGGCTACATGA

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Protein seq

MAYHHLLLSPPPPHPRLSLVMSRRRPRAGHVAAACSPSPSALAAGRRAVLLVGVSVLPLLRLRDAAFAAAAARPPSTTTVDLVTDRIDTAKTEETQPEEPSAEESLAEVKVPPAVNPLAGLLNAIAVIASGVFAGLFGASQREKEALQSTVSTMEIKLAENEAAMSMLRENYEKQIWNEHAEQKKQARMFQEKEASLLDQLTLTKRTVTSLNEEVRREKELVEQLKQEIHRLKSSIAQAEDDKHVFEGKLREKLEALDSLQDKVNLLSQEVNSKEEAIRELSSSLSSKEEDYQKLQLIYNETEASLEYANSKIEQLEEDYSATKDDLNSKMSSIDSLNKEVQTLYTAKTGAEEKISELKKQYADLAASSEMRASCDSELLIEKDNLLNQLEEKLSATLSDTSKNKIIIAELNNELDTNRTMLDNEVEAHKKLSEILQSTEGALTDYRDKVFNLSEELNRVKISNQQLITQITKLTDESNITKQVLSNKIAEAEAVSKVLSDELASVRDVLQKTQEKLDVTSNQLVSTMEARDDLNKELLDAYKKLESATDELVRERKINATLNRELEALVEQSIVESEARQALQADLDEVTNSQKEVDESTQFLSERLDTSNSRISSIEEKKEMLSEALEQQKRSTMEAQKDMEDAQNLIKMLGTERENFEIRSKKLEEELATAKGEILRLRRQISASGYLRTELAEASVTSNTSQPEQDVNDPDQNSNNTDAGDTRSPTRIYRRRKTKRAT

Function MAR-binding filament-like protein 1-1 [UniProtKB/Swiss-Prot:Q9M7J4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_05G0073000 OsMH63_05T0073000.1 Chr05 4971317 4975375 - maker
CDS seq

ATGGCCTACCACCACCTCCTCCTCTCGCCGCCGCCGCCGCACCCGCGCCTCTCGCTCGTCATGTCCCGCCGCCGCCCGCGCGCGGGCCATGTCGCCGCCGCCTGCTCCCCGTCGCCGTCGGCGCTGGCGGCGGGGAGGAGGGCCGTGCTCCTGGTCGGCGTCTCGGTGCTCCCGCTCCTCCGCCTGCGTGACGCCGCCTTCGCGGCGGCCGCGGCGCGACCGCCGTCGACGACGACGGTGGATCTCGTCACTGATAGAATAGACACTGCGAAGACTGAGGAGACTCAACCTGAAGAACCTTCGGCTGAGGAATCTCTGGCTGAGGTGAAAGTACCACCTGCAGTGAATCCACTTGCAGGTCTTCTGAATGCAATCGCAGTTATTGCTTCTGGTGTTTTTGCTGGACTTTTTGGTGCTTCTCAAAGGGAAAAAGAGGCGTTGCAATCTACCGTCTCAACTATGGAGATCAAGTTGGCTGAAAATGAGGCAGCAATGTCCATGCTTAGGGAAAACTATGAGAAACAGATATGGAATGAACATGCAGAACAAAAGAAACAGGCTAGGATGTTCCAGGAGAAGGAAGCTTCCCTTCTGGATCAATTGACTTTGACTAAGAGAACAGTAACATCTTTAAACGAGGAAGTGAGAAGGGAGAAAGAATTAGTTGAGCAGCTTAAACAAGAGATACATCGACTTAAGAGTAGCATTGCACAAGCAGAAGACGACAAACATGTGTTTGAAGGCAAATTGAGAGAGAAGTTGGAAGCACTTGATAGTTTACAGGACAAGGTAAATCTGCTCAGCCAAGAGGTGAATTCCAAGGAGGAAGCCATCAGGGAACTAAGCTCATCACTCTCTTCCAAGGAAGAAGACTATCAGAAGCTGCAGTTGATCTACAATGAAACCGAAGCAAGCCTAGAGTATGCAAATTCTAAAATAGAGCAACTGGAGGAGGATTATTCTGCAACTAAAGATGATCTGAACTCAAAGATGTCTTCAATTGATTCATTGAATAAGGAAGTCCAAACACTATACACTGCAAAAACTGGAGCAGAAGAAAAGATAAGTGAACTAAAGAAACAGTATGCAGACCTTGCAGCTTCTTCTGAGATGAGGGCATCTTGTGATTCTGAACTACTGATTGAGAAAGATAACCTGCTCAACCAGCTTGAAGAAAAACTATCTGCTACATTAAGTGACACTAGTAAGAACAAAATTATAATTGCTGAACTGAACAATGAATTGGACACCAACAGAACTATGCTAGATAATGAGGTTGAAGCTCATAAGAAATTATCAGAGATTCTTCAGTCCACTGAAGGGGCATTAACAGATTACAGAGACAAGGTGTTCAACCTCTCTGAAGAGCTTAATAGAGTGAAGATATCAAATCAGCAATTGATAACCCAGATTACAAAGTTGACAGACGAGTCCAATATAACGAAACAGGTTCTGTCTAACAAAATTGCAGAGGCAGAAGCAGTTTCTAAAGTTCTTTCAGATGAATTGGCATCAGTAAGGGATGTACTTCAAAAGACACAAGAAAAGCTTGATGTCACTTCTAATCAATTAGTGTCAACTATGGAAGCACGCGATGACCTTAATAAAGAACTGCTGGATGCATACAAGAAGTTAGAGTCTGCAACAGATGAGCTTGTTAGAGAACGTAAAATTAATGCTACTCTAAACAGGGAGCTTGAGGCATTGGTGGAACAATCGATTGTAGAATCTGAAGCACGACAAGCTCTTCAAGCAGACCTTGATGAGGTGACCAATTCACAAAAAGAGGTGGATGAGAGTACACAGTTCCTGTCTGAGAGGCTGGATACCTCAAATTCTAGGATTTCTTCTATTGAAGAAAAGAAAGAGATGCTTTCAGAGGCTCTTGAGCAACAAAAGAGAAGTACAATGGAAGCTCAGAAAGATATGGAGGATGCTCAGAATCTTATAAAAATGCTTGGAACGGAGAGAGAGAATTTTGAAATAAGGTCTAAGAAACTTGAAGAGGAATTGGCCACAGCAAAAGGTGAGATATTGAGACTGAGGCGGCAGATCAGCGCAAGTGGATATCTGAGAACAGAACTTGCGGAAGCAAGTGTGACATCAAATACTTCTCAACCTGAGCAAGATGTGAATGACCCTGATCAGAATAGCAACAATACCGATGCTGGAGATACTCGTTCTCCTACAAGGATTTATAGGAGAAGAAAAACTAAACGGGCTACATGA

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Protein seq

MAYHHLLLSPPPPHPRLSLVMSRRRPRAGHVAAACSPSPSALAAGRRAVLLVGVSVLPLLRLRDAAFAAAAARPPSTTTVDLVTDRIDTAKTEETQPEEPSAEESLAEVKVPPAVNPLAGLLNAIAVIASGVFAGLFGASQREKEALQSTVSTMEIKLAENEAAMSMLRENYEKQIWNEHAEQKKQARMFQEKEASLLDQLTLTKRTVTSLNEEVRREKELVEQLKQEIHRLKSSIAQAEDDKHVFEGKLREKLEALDSLQDKVNLLSQEVNSKEEAIRELSSSLSSKEEDYQKLQLIYNETEASLEYANSKIEQLEEDYSATKDDLNSKMSSIDSLNKEVQTLYTAKTGAEEKISELKKQYADLAASSEMRASCDSELLIEKDNLLNQLEEKLSATLSDTSKNKIIIAELNNELDTNRTMLDNEVEAHKKLSEILQSTEGALTDYRDKVFNLSEELNRVKISNQQLITQITKLTDESNITKQVLSNKIAEAEAVSKVLSDELASVRDVLQKTQEKLDVTSNQLVSTMEARDDLNKELLDAYKKLESATDELVRERKINATLNRELEALVEQSIVESEARQALQADLDEVTNSQKEVDESTQFLSERLDTSNSRISSIEEKKEMLSEALEQQKRSTMEAQKDMEDAQNLIKMLGTERENFEIRSKKLEEELATAKGEILRLRRQISASGYLRTELAEASVTSNTSQPEQDVNDPDQNSNNTDAGDTRSPTRIYRRRKTKRAT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 3.211071 9.141304 17.7436265

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0180400 RBH 0.192391 0.000000 1.410678
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g08790 RBH 0.130105 0.000000 0.363136
Nipponbare | IRGSP 1.0 | RAP-db Os05g0180400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0005500 RBH 0.340610 3.481904 3.139212
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0005470 RBH 0.0 0.335641 0.803859
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0005370 RBH 0.0 1.813305 2.164820
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0005450 RBH 0.0 0.154628 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0005560 RBH 1.406115 1.542654 5.566833
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0073100 RBH 8.671996 4.4842955 8.9712985
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0005330 RBH 0.0 0.317339 0.272029
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0074400 RBH 2.0387195 2.6657025 12.282868
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0005470 RBH 0.242142 0.108928 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0005400 RBH 0.000000 12.967686 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0005480 RBH 0.0 10.727446 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0005510 RBH 0.000000 0.469985 0.271452
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0005520 RBH 0.0 6.718550 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G005350 RBH 0.000000 1.755221 0.634098
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0005570 RBH 0.0 16.331924 4.034025
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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