Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_04G0509000		OGI:04094900 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr04:34131900-34136755		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		BIDK1, OsBIDK1, OsDGK1, DGK1
DNA seq		ATGCCCAACTCCAACTCCATGTAGAGAAGGAAATTTCGAACGGAGGTCGCTTTCTATATTTCTCTTGTCCTCTTCTTCTCCCCTTCGTCCTCGCTACCATCGCCCTATTAATATTCCTCAAAATCCAAATTTGAGACAACCCGAATTCAGTCCTCAGCGAGTCGGAAACGCGCCGAAAGACGAACTGGAGGCGCCCCCCCAAATCTTGAGATCGCAGGTAATGTCCATAGGCGCCGAGCTTCATGAGTCCTCCTGCGAGGGATCTTGTCTTGAGGTTTCTTGCATCTTGGCCTGTGCATTTTGAGTTTTGATGTGCTTGCTGCTGATCCGAATTCCATCTCCGTTGTTGCCGTAAGATTCTGAATCGAATTCATGCATTTGTACGGCAGATTTTTTTTTCCCCCGCTAGATCCGTATGGTGTGGTTATTTGGGCGATGATAGTATGGGTCCAAGAAACGCGGTTTTCCCTGTGAATTGAGGATCTCCAATTTGCTTCTTTGGCTTCGGTCCCTGGCGGTTGTGTTCTCCAATCCCATGGTTCATGCTAGACGCTTCCTGCAGACAGGACTAGACATTTTCAGTTTTGGTAACTGTGAAGATTATGGCATTGTTTACCAAGAGAAACTGCTGCATTGTGATATGTAAAAAATTACCCTTTTTTTTCCTTCTCTTTTAGTAGAATTATTACGGAACATGCTTCGCTTGGCGTCTGTATCTATCTACGTTCTTTATTCTAAAAGGCTGTGCTTTTTTGTGAGCATTGTCATCCTTTTTTTTTTCCTTTCAACTCCTTCTGTTCATTTAATGAACAATTCCGTTCTTTCTGGTGTTGATACTGCCACGTTTTACTGATTTTCCATTATTTTATTAATTCCTACTTGACAAGATTCTTATCGAACAATTATTGTGAATCTTTTAGTAGGAATCTCGTAAAGCGCCAGTGTCGCATTTTCCTTTGAGGATCTGATTTTTCCCATCAAGCAATGGTGGGATAGCCAGTAGTAAAATTTAGGCTTTCAGGCTCACTCCACATCAGAAAATTTTCTACTTACATACTATCGTTTGTAGAACAATCGTGGAAGTTTATGCCCTTGCTCAAAAAAAAAAAAAAGAACAATCGTGGAAGTGGAAGAAGGGTTCCGTGAAGCGCATAGATCAATAATGTCTAATCTCTTTTCACTCATAAAAATGTTTTGCAGGATGGATGGACATACAAATGGCACTAATGGTTCCTGCTCTAAGCCATGCGAGCCATTAACAGACTACTGCATCCCTGATTACATTCTGAATCCTGACTCTGAACAAGTCCTCGTTGATCAGGCACCATGTTGCCCTGTAGTAGTATTCATCAACTCTAGAAGTGGCGGCCAACTCGGAAGCAGTTTGATCAAAACGTATCGTGAGCTTCTCAATAAAGCGCAGGTACCTAATCTAGTAGTTTGGGAAGATGGAATGCTGAAAAGATTCCCTTGAGCCATAGTAGGACTTCATATCATTCTCTCATATTATCTCATATTTGGATCCACAATTTTTACAGGTTTTTGATTTATCAGAAGAGGCTCCTGAAAAGGTGCTTCACAGATTGTATTGCAACTTTGAGAAGCTCAAGTCTAATGGCGACCCTATTGCTTTTCAAATTCAGAGCAACCTAAGGCTAATTGTGAGTAGCCTAACTAGAAAACATAAAGAATGATCTTTTTGCTTTAGGATATGTCCTCTTAACTAATGATCTTTGAAATAGGTTGCTGGTGGTGATGGCACAGCAAGTTGGCTGCTTGGTGTAGTTAGTGACCTTAAGCTCTCTCACCCACCTCCTATTGCAACTGTGCCTCTGGGAACTGGAAACAACCTTCCATTCTCATTTGGATGGGTATGTCTATGACTATTGTTTTGTTTCAACACATATATTCTCTTCAGTTGTGATAATCTCCTCCCTTTAGATAATTCACGCTTGTTGTGAATTTGTGATCATATACGAGCTGTTTTTGTTGTTGAGCTGTTTGACAACATAAGAAGGTTTAGCATTAAGAAACATGCATTTTTGAATTAATAGTGAAATAGTGATCATATGCTTGATACCTAAATTTTATGTCTTATTGACTGTGAGCTGTGAGGGGTGCATGATTTTTCATTCTAAAGTAGAAGATTACTGAATCTGAGATTTTCTTGTTAGTTTGATCTGGATTCCTTGGCCGTCTTTTTACCTAGTCTGCATAATCTGCAGCCATGATCTCTGAATCTTCCCTGGCATCTAGTTTTATACCTCTATTAAATTTAATTTGACTGCAGGGGAAGAAGAACCCAACCACTGACCAAGAGGCGGTGAAATCATTTCTTGGACAAGTTAAAAAAGCAAGAGAAATGAATATTGATAGGTAATATCTCAAGCACACAATGTTATATTTGTTTCTGTTTTTTCTGTCATGCTTGTGAAAAGTACAAGTCCTGCCCAATAATTCACTGCGACAGCTCTTTCATATATGTTGTGTAGCAGTCATTTTTAGTTTTAAACATGAGTAAAATGTAATCCCTTATATATTCTGCATATGAAAGAAAACACCCATTTGAATGTACTTTTTTAAGTTGGCATATCATCATGAGGATGCGAGCTCCACAGGAAGGTCCATGTGAACCTATTGCTCCGTTAGAGCTGCCTCACTCATTGCATGCATTCCACCGTGTATCAGGAAGCGATTCACTTAATATGGTAAGACAACTCACTGTGGATACTGTTTTTACTTGATTCTTTCTATTACAGAAGTAGTAGCCAATAGCCATGGACTTTCACTTTTGAATAGTATGGACAATTGGACAGGCTGAGAACTGAATATATAGATCTTTAAGCTTGCTTAGCAGTTTTTTCTTTTATATTTTTGTTCAGGAGGGCTACCACACATACCGTGGAGGATTTTGGAATTACTTTAGTATGGGTAAGAGTTCCTCTCGTATCCAAGGCACAGCATGATGTTTTTTTTTTTTTTTGGTTTATGCTAGTTCTTGCTCTAACAGATATCAAACAGTCACCGTTGTTATCCAGTACCTTTTAATCAGGACTTGTTAACAATATTATCGTAGAACATATTTTAGTATCTTTTAAGCATATCATGATTAATAAGGCAGTAATAGAAACATGGTCATCATGACTTCACATACTGCAGGGATGGATGCACAAGTGTCTTACGAATTTCACTCTGAGAGGAAGAGAAATCCCGAGAAGTTCAAGAACCAGCTAACAAATCAGGTTCTTCTCGTTTCTGTAGGGCAAGTCTTGTGGCACATTTCATTTTGTTTATGCTGAATGTTGTGATGCATTTCTTTGATGCAGAGTACATATGCTAAGCTTGGACTTAAACAAGGATGGTTTGCTGCTTCACTAACTCACCCATCCTCGAGGTAGCCTGTCACTAATGCAACCATGATGCCCCTGATATTGATCAAATTATCCTCATTGATCGGTGTTAGCATTTCAAGTACCACGCTTAGCTATTATATGCCTTTACGTCGGATATGCATGACGTGTACAGCTCCCATTTTCAGGAACATTGCTCAACTTGCAAAGGTGCGGATCATGAAAAGACCTGGTGGCCAATGGGAAGAGCTTAAGATTCCTCGCAGGTAAATAAATCCTTGCTTCCTTTGCAGTGTATTTGTACAAGGCAATTTCCATTTTGCTTCATCTAAAATGTCTGGTTCTTCCAAAATCCCAACCCCATTTTCCATCTCCAAGTTTCTTAGACACATTTCTAGAATGTTATCATCACCACAGAATGTAGCTATGAAAATCAACATATATTCCCTCTATTGTTTCAGCATTCGATCAATCGTCTGTCTGAATCTGCCAAGTTTTTCTGGAGGACTGAATCCTTGGGGAACACCTGGCACCAGGAAAGTACAAGATGTAAGTAGAGCACTTGCCTCTTCTGTTGTCGTTTCACTCCTAATGGCTTTGCCATGGGCAAAGAATTTATAAGTTTTCATGGCAATATGCAGAGAGACCTGACTGCACCATTTGTCGACGACGGCCTTATCGAGGTTGTCGGCTTTCGCGATGCCTGGCACGGTCTTGTCTTGCTTGCCCCTAATGGCCATGGAACTCGTCTAGCACAGGTGATGCATCTGTTCTCAACCCATTTCCTGAACTCCCTACATTTCAGCTAGCATTGCTGATGCAGTCACACATTTCACATTTTTCAGGCCCATAGAATCCGGTTCCAGTTCCACAAAGGAGCAGCCGAGCACACGTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCTCTTCCCAAGGACGATGACACCGTGGTCGTCGAGATCTCTCACCTCCGTCAGGTCACCATGCTCGCCAGCGACCCGTGCAAGTCGAAGAGCGTCAACGACCCCTCGTCGCCGATGTGCTGTAGCAACCACGACGACGACGAGCGCAACAGCTTGGAGGACGAAGATGAGTGGGAGGAGGGGAGGAAGAAGTTTGGTGCAGCTGATACGTTCAAGTTCCCTGATGAGGTTGATGTTGCTCACCTTAGCTGAGCTATAAGTGATTCAGAGTTCAGATTTCAGAATGTTCGCTACTACTGTTAGCGATACTGCCTTTTTGGGGGTTTATATATACTACTAGTTTATTAGTTATCAGCCCTGTGTAGATTCGACCGGCTGTATTCGAGAACTGCAAAATTTTCCGAGTAATGTCATATTTTCATGCGACGCAATTGGTCTGTTCCCAGAAAATCATGTCCCAAAACAAACTTCTTGTCCTGAACCCTCTGTATATGTTTGCTAGCGTAAATTACTCATTTTTTGCGGGGAAGTGTAAATTACTCATGTCAAGCTGCTTTTTACTTGAAAAAACGGTCCATTT More
CDS seq		ATGTCTAATCTCTTTTCACTCATAAAAATGTTTTGCAGGATGGATGGACATACAAATGGCACTAATGGTTCCTGCTCTAAGCCATGCGAGCCATTAACAGACTACTGCATCCCTGATTACATTCTGAATCCTGACTCTGAACAAGTCCTCGTTGATCAGGCACCATGTTGCCCTGTAGTAGTATTCATCAACTCTAGAAGTGGCGGCCAACTCGGAAGCAGTTTGATCAAAACGTATCGTGAGCTTCTCAATAAAGCGCAGGTTTTTGATTTATCAGAAGAGGCTCCTGAAAAGGTGCTTCACAGATTGTATTGCAACTTTGAGAAGCTCAAGTCTAATGGCGACCCTATTGCTTTTCAAATTCAGAGCAACCTAAGGCTAATTGTTGCTGGTGGTGATGGCACAGCAAGTTGGCTGCTTGGTGTAGTTAGTGACCTTAAGCTCTCTCACCCACCTCCTATTGCAACTGTGCCTCTGGGAACTGGAAACAACCTTCCATTCTCATTTGGATGGGGGAAGAAGAACCCAACCACTGACCAAGAGGCGGTGAAATCATTTCTTGGACAAGTTAAAAAAGCAAGAGAAATGAATATTGATAGTTGGCATATCATCATGAGGATGCGAGCTCCACAGGAAGGTCCATGTGAACCTATTGCTCCGTTAGAGCTGCCTCACTCATTGCATGCATTCCACCGTGTATCAGGAAGCGATTCACTTAATATGGAGGGCTACCACACATACCGTGGAGGATTTTGGAATTACTTTAGTATGGGGATGGATGCACAAGTGTCTTACGAATTTCACTCTGAGAGGAAGAGAAATCCCGAGAAGTTCAAGAACCAGCTAACAAATCAGAGTACATATGCTAAGCTTGGACTTAAACAAGGATGGTTTGCTGCTTCACTAACTCACCCATCCTCGAGGAACATTGCTCAACTTGCAAAGGTGCGGATCATGAAAAGACCTGGTGGCCAATGGGAAGAGCTTAAGATTCCTCGCAGCATTCGATCAATCGTCTGTCTGAATCTGCCAAGTTTTTCTGGAGGACTGAATCCTTGGGGAACACCTGGCACCAGGAAAGTACAAGATAGAGACCTGACTGCACCATTTGTCGACGACGGCCTTATCGAGGTTGTCGGCTTTCGCGATGCCTGGCACGGTCTTGTCTTGCTTGCCCCTAATGGCCATGGAACTCGTCTAGCACAGGCCCATAGAATCCGGTTCCAGTTCCACAAAGGAGCAGCCGAGCACACGTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCTCTTCCCAAGGACGATGACACCGTGGTCGTCGAGATCTCTCACCTCCGTCAGGTCACCATGCTCGCCAGCGACCCGTGCAAGTCGAAGAGCGTCAACGACCCCTCGTCGCCGATGTGCTGTAGCAACCACGACGACGACGAGCGCAACAGCTTGGAGGACGAAGATGAGTGGGAGGAGGGGAGGAAGAAGTTTGGTGCAGCTGATACGTTCAAGTTCCCTGATGAGGTTGATGTTGCTCACCTTAGCTGA More
Protein seq		MSNLFSLIKMFCRMDGHTNGTNGSCSKPCEPLTDYCIPDYILNPDSEQVLVDQAPCCPVVVFINSRSGGQLGSSLIKTYRELLNKAQVFDLSEEAPEKVLHRLYCNFEKLKSNGDPIAFQIQSNLRLIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGKKNPTTDQEAVKSFLGQVKKAREMNIDSWHIIMRMRAPQEGPCEPIAPLELPHSLHAFHRVSGSDSLNMEGYHTYRGGFWNYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQLAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFQFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLRQVTMLASDPCKSKSVNDPSSPMCCSNHDDDERNSLEDEDEWEEGRKKFGAADTFKFPDEVDVAHLS
Function		Diacylglycerol kinase 5 [UniProtKB/Swiss-Prot:Q9C5E5]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0509000	OsMH63_04T0509000.1	Chr04	34131900	34136748	+	maker
CDS seq	ATGCCCAACTCCAACTCCATGATGGATGGACATACAAATGGCACTAATGGTTCCTGCTCTAAGCCATGCGAGCCATTAACAGACTACTGCATCCCTGATTACATTCTGAATCCTGACTCTGAACAAGTCCTCGTTGATCAGGCACCATGTTGCCCTGTAGTAGTATTCATCAACTCTAGAAGTGGCGGCCAACTCGGAAGCAGTTTGATCAAAACGTATCGTGAGCTTCTCAATAAAGCGCAGGTTTTTGATTTATCAGAAGAGGCTCCTGAAAAGGTGCTTCACAGATTGTATTGCAACTTTGAGAAGCTCAAGTCTAATGGCGACCCTATTGCTTTTCAAATTCAGAGCAACCTAAGGCTAATTGTTGCTGGTGGTGATGGCACAGCAAGTTGGCTGCTTGGTGTAGTTAGTGACCTTAAGCTCTCTCACCCACCTCCTATTGCAACTGTGCCTCTGGGAACTGGAAACAACCTTCCATTCTCATTTGGATGGGGGAAGAAGAACCCAACCACTGACCAAGAGGCGGTGAAATCATTTCTTGGACAAGTTAAAAAAGCAAGAGAAATGAATATTGATAGTTGGCATATCATCATGAGGATGCGAGCTCCACAGGAAGGTCCATGTGAACCTATTGCTCCGTTAGAGCTGCCTCACTCATTGCATGCATTCCACCGTGTATCAGGAAGCGATTCACTTAATATGGAGGGCTACCACACATACCGTGGAGGATTTTGGAATTACTTTAGTATGGGGATGGATGCACAAGTGTCTTACGAATTTCACTCTGAGAGGAAGAGAAATCCCGAGAAGTTCAAGAACCAGCTAACAAATCAGAGTACATATGCTAAGCTTGGACTTAAACAAGGATGGTTTGCTGCTTCACTAACTCACCCATCCTCGAGGAACATTGCTCAACTTGCAAAGGTGCGGATCATGAAAAGACCTGGTGGCCAATGGGAAGAGCTTAAGATTCCTCGCAGCATTCGATCAATCGTCTGTCTGAATCTGCCAAGTTTTTCTGGAGGACTGAATCCTTGGGGAACACCTGGCACCAGGAAAGTACAAGATAGAGACCTGACTGCACCATTTGTCGACGACGGCCTTATCGAGGTTGTCGGCTTTCGCGATGCCTGGCACGGTCTTGTCTTGCTTGCCCCTAATGGCCATGGAACTCGTCTAGCACAGGCCCATAGAATCCGGTTCCAGTTCCACAAAGGAGCAGCCGAGCACACGTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCTCTTCCCAAGGACGATGACACCGTGGTCGTCGAGATCTCTCACCTCCGTCAGGTCACCATGCTCGCCAGCGACCCGTGCAAGTCGAAGAGCGTCAACGACCCCTCGTCGCCGATGTGCTGTAGCAACCACGACGACGACGAGCGCAACAGCTTGGAGGACGAAGATGAGTGGGAGGAGGGGAGGAAGAAGTTTGGTGCAGCTGATACGTTCAAGTTCCCTGATGAGGTTGATGTTGCTCACCTTAGCTGA More
Protein seq	MPNSNSMMDGHTNGTNGSCSKPCEPLTDYCIPDYILNPDSEQVLVDQAPCCPVVVFINSRSGGQLGSSLIKTYRELLNKAQVFDLSEEAPEKVLHRLYCNFEKLKSNGDPIAFQIQSNLRLIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGKKNPTTDQEAVKSFLGQVKKAREMNIDSWHIIMRMRAPQEGPCEPIAPLELPHSLHAFHRVSGSDSLNMEGYHTYRGGFWNYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQLAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFQFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLRQVTMLASDPCKSKSVNDPSSPMCCSNHDDDERNSLEDEDEWEEGRKKFGAADTFKFPDEVDVAHLS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0509000	OsMH63_04T0509000.2	Chr04	34132037	34136748	+	maker
CDS seq	ATGTCTAATCTCTTTTCACTCATAAAAATGTTTTGCAGGATGGATGGACATACAAATGGCACTAATGGTTCCTGCTCTAAGCCATGCGAGCCATTAACAGACTACTGCATCCCTGATTACATTCTGAATCCTGACTCTGAACAAGTCCTCGTTGATCAGGCACCATGTTGCCCTGTAGTAGTATTCATCAACTCTAGAAGTGGCGGCCAACTCGGAAGCAGTTTGATCAAAACGTATCGTGAGCTTCTCAATAAAGCGCAGGTTTTTGATTTATCAGAAGAGGCTCCTGAAAAGGTGCTTCACAGATTGTATTGCAACTTTGAGAAGCTCAAGTCTAATGGCGACCCTATTGCTTTTCAAATTCAGAGCAACCTAAGGCTAATTGTTGCTGGTGGTGATGGCACAGCAAGTTGGCTGCTTGGTGTAGTTAGTGACCTTAAGCTCTCTCACCCACCTCCTATTGCAACTGTGCCTCTGGGAACTGGAAACAACCTTCCATTCTCATTTGGATGGGGGAAGAAGAACCCAACCACTGACCAAGAGGCGGTGAAATCATTTCTTGGACAAGTTAAAAAAGCAAGAGAAATGAATATTGATAGTTGGCATATCATCATGAGGATGCGAGCTCCACAGGAAGGTCCATGTGAACCTATTGCTCCGTTAGAGCTGCCTCACTCATTGCATGCATTCCACCGTGTATCAGGAAGCGATTCACTTAATATGGAGGGCTACCACACATACCGTGGAGGATTTTGGAATTACTTTAGTATGGGGATGGATGCACAAGTGTCTTACGAATTTCACTCTGAGAGGAAGAGAAATCCCGAGAAGTTCAAGAACCAGCTAACAAATCAGAGTACATATGCTAAGCTTGGACTTAAACAAGGATGGTTTGCTGCTTCACTAACTCACCCATCCTCGAGGAACATTGCTCAACTTGCAAAGGTGCGGATCATGAAAAGACCTGGTGGCCAATGGGAAGAGCTTAAGATTCCTCGCAGCATTCGATCAATCGTCTGTCTGAATCTGCCAAGTTTTTCTGGAGGACTGAATCCTTGGGGAACACCTGGCACCAGGAAAGTACAAGATAGAGACCTGACTGCACCATTTGTCGACGACGGCCTTATCGAGGTTGTCGGCTTTCGCGATGCCTGGCACGGTCTTGTCTTGCTTGCCCCTAATGGCCATGGAACTCGTCTAGCACAGGCCCATAGAATCCGGTTCCAGTTCCACAAAGGAGCAGCCGAGCACACGTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCTCTTCCCAAGGACGATGACACCGTGGTCGTCGAGATCTCTCACCTCCGTCAGGTCACCATGCTCGCCAGCGACCCGTGCAAGTCGAAGAGCGTCAACGACCCCTCGTCGCCGATGTGCTGTAGCAACCACGACGACGACGAGCGCAACAGCTTGGAGGACGAAGATGAGTGGGAGGAGGGGAGGAAGAAGTTTGGTGCAGCTGATACGTTCAAGTTCCCTGATGAGGTTGATGTTGCTCACCTTAGCTGA More
Protein seq	MSNLFSLIKMFCRMDGHTNGTNGSCSKPCEPLTDYCIPDYILNPDSEQVLVDQAPCCPVVVFINSRSGGQLGSSLIKTYRELLNKAQVFDLSEEAPEKVLHRLYCNFEKLKSNGDPIAFQIQSNLRLIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGKKNPTTDQEAVKSFLGQVKKAREMNIDSWHIIMRMRAPQEGPCEPIAPLELPHSLHAFHRVSGSDSLNMEGYHTYRGGFWNYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQLAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFQFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLRQVTMLASDPCKSKSVNDPSSPMCCSNHDDDERNSLEDEDEWEEGRKKFGAADTFKFPDEVDVAHLS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0509000	OsMH63_04T0509000.3	Chr04	34131900	34136755	+	maker
CDS seq	ATGCCCAACTCCAACTCCATGATGGATGGACATACAAATGGCACTAATGGTTCCTGCTCTAAGCCATGCGAGCCATTAACAGACTACTGCATCCCTGATTACATTCTGAATCCTGACTCTGAACAAGTCCTCGTTGATCAGGCACCATGTTGCCCTGTAGTAGTATTCATCAACTCTAGAAGTGGCGGCCAACTCGGAAGCAGTTTGATCAAAACGTATCGTGAGCTTCTCAATAAAGCGCAGGTTTTTGATTTATCAGAAGAGGCTCCTGAAAAGGTGCTTCACAGATTGTATTGCAACTTTGAGAAGCTCAAGTCTAATGGCGACCCTATTGCTTTTCAAATTCAGAGCAACCTAAGGCTAATTGTTGCTGGTGGTGATGGCACAGCAAGTTGGCTGCTTGGTGTAGTTAGTGACCTTAAGCTCTCTCACCCACCTCCTATTGCAACTGTGCCTCTGGGAACTGGAAACAACCTTCCATTCTCATTTGGATGGGGGAAGAAGAACCCAACCACTGACCAAGAGGCGGTGAAATCATTTCTTGGACAAGTTAAAAAAGCAAGAGAAATGAATATTGATAGTTGGCATATCATCATGAGGATGCGAGCTCCACAGGAAGGTCCATGTGAACCTATTGCTCCGTTAGAGCTGCCTCACTCATTGCATGCATTCCACCGTGTATCAGGAAGCGATTCACTTAATATGGAGGGCTACCACACATACCGTGGAGGATTTTGGAATTACTTTAGTATGGGGATGGATGCACAAGTGTCTTACGAATTTCACTCTGAGAGGAAGAGAAATCCCGAGAAGTTCAAGAACCAGCTAACAAATCAGAGTACATATGCTAAGCTTGGACTTAAACAAGGATGGTTTGCTGCTTCACTAACTCACCCATCCTCGAGGAACATTGCTCAACTTGCAAAGGTGCGGATCATGAAAAGACCTGGTGGCCAATGGGAAGAGCTTAAGATTCCTCGCAGCATTCGATCAATCGTCTGTCTGAATCTGCCAAGTTTTTCTGGAGGACTGAATCCTTGGGGAACACCTGGCACCAGGAAAGTACAAGATAGAGACCTGACTGCACCATTTGTCGACGACGGCCTTATCGAGGTTGTCGGCTTTCGCGATGCCTGGCACGGTCTTGTCTTGCTTGCCCCTAATGGCCATGGAACTCGTCTAGCACAGGCCCATAGAATCCGGTTCCAGTTCCACAAAGGAGCAGCCGAGCACACGTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCTCTTCCCAAGGACGATGACACCGTGGTCGTCGAGATCTCTCACCTCCGTCAGGTCACCATGCTCGCCAGCGACCCGTGCAAGTCGAAGAGCGTCAACGACCCCTCGTCGCCGATGTGCTGTAGCAACCACGACGACGACGAGCGCAACAGCTTGGAGGACGAAGATGAGTGGGAGGAGGGGAGGAAGAAGTTTGGTGCAGCTGATACGTTCAAGTTCCCTGATGAGGTTGATGTTGCTCACCTTAGCTGA More
Protein seq	MPNSNSMMDGHTNGTNGSCSKPCEPLTDYCIPDYILNPDSEQVLVDQAPCCPVVVFINSRSGGQLGSSLIKTYRELLNKAQVFDLSEEAPEKVLHRLYCNFEKLKSNGDPIAFQIQSNLRLIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGKKNPTTDQEAVKSFLGQVKKAREMNIDSWHIIMRMRAPQEGPCEPIAPLELPHSLHAFHRVSGSDSLNMEGYHTYRGGFWNYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQLAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFQFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLRQVTMLASDPCKSKSVNDPSSPMCCSNHDDDERNSLEDEDEWEEGRKKFGAADTFKFPDEVDVAHLS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0509000	OsMH63_04T0509000.4	Chr04	34131900	34136748	+	maker
CDS seq	ATGCCCAACTCCAACTCCATGATGGATGGACATACAAATGGCACTAATGGTTCCTGCTCTAAGCCATGCGAGCCATTAACAGACTACTGCATCCCTGATTACATTCTGAATCCTGACTCTGAACAAGTCCTCGTTGATCAGGCACCATGTTGCCCTGTAGTAGTATTCATCAACTCTAGAAGTGGCGGCCAACTCGGAAGCAGTTTGATCAAAACGTATCGTGAGCTTCTCAATAAAGCGCAGGAGGGCTACCACACATACCGTGGAGGATTTTGGAATTACTTTAGTATGGGGATGGATGCACAAGTGTCTTACGAATTTCACTCTGAGAGGAAGAGAAATCCCGAGAAGTTCAAGAACCAGCTAACAAATCAGAGTACATATGCTAAGCTTGGACTTAAACAAGGATGGTTTGCTGCTTCACTAACTCACCCATCCTCGAGGAACATTGCTCAACTTGCAAAGGTGCGGATCATGAAAAGACCTGGTGGCCAATGGGAAGAGCTTAAGATTCCTCGCAGCATTCGATCAATCGTCTGTCTGAATCTGCCAAGTTTTTCTGGAGGACTGAATCCTTGGGGAACACCTGGCACCAGGAAAGTACAAGATAGAGACCTGACTGCACCATTTGTCGACGACGGCCTTATCGAGGTTGTCGGCTTTCGCGATGCCTGGCACGGTCTTGTCTTGCTTGCCCCTAATGGCCATGGAACTCGTCTAGCACAGGCCCATAGAATCCGGTTCCAGTTCCACAAAGGAGCAGCCGAGCACACGTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCTCTTCCCAAGGACGATGACACCGTGGTCGTCGAGATCTCTCACCTCCGTCAGGTCACCATGCTCGCCAGCGACCCGTGCAAGTCGAAGAGCGTCAACGACCCCTCGTCGCCGATGTGCTGTAGCAACCACGACGACGACGAGCGCAACAGCTTGGAGGACGAAGATGAGTGGGAGGAGGGGAGGAAGAAGTTTGGTGCAGCTGATACGTTCAAGTTCCCTGATGAGGTTGATGTTGCTCACCTTAGCTGA More
Protein seq	MPNSNSMMDGHTNGTNGSCSKPCEPLTDYCIPDYILNPDSEQVLVDQAPCCPVVVFINSRSGGQLGSSLIKTYRELLNKAQEGYHTYRGGFWNYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQLAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFQFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLRQVTMLASDPCKSKSVNDPSSPMCCSNHDDDERNSLEDEDEWEEGRKKFGAADTFKFPDEVDVAHLS More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	3.732514	30.5997	5.826033

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0634700	RBH	0.307892	0.425230	1.821958
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g54200	RBH	0.205492	0.297182	0.462879
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0634700	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0027940	RBH	0.483489	11.739288	2.518612
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0028710	RBH	0.000000	4.209058	2.131964
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0028320	RBH	1.555191	20.945490	9.019446
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0028140	RBH	0.000000	0.183126	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0028380	RBH	0.000000	25.670383	12.435102
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_08G0068500	RBH	5.9719975	9.473691	6.473256
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0027060	RBH	0.048194	1.480042	2.323651
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0513200	RBH	5.617254	31.3200855	20.515127
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0027480	RBH	0.000000	0.125616	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0027310	RBH	0.479139	3.229160	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0027370	RBH	0.0	13.556271	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0027990	RBH	0.105148	0.949667	1.091624
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0027960	RBH	0.144354	12.877670	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G027360	RBH	0.291077	9.279588	3.267910
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0027230	RBH	0.000000	23.454027	5.058920

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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