Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0027990 | OGI:04094900 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:34569130-34573733 | ||||||||
| Gene Symbol | BIDK1, OsBIDK1, OsDGK1, DGK1 | ||||||||||
| DNA seq | aacccgaattcagtcctcagcgagtcggaaacgcgccgaaagacgaactggaggcgcccccccaaatcttgagatcgcaggtaatgtccataggcgccgagcttcatgagtcctcctgcgagggatcttgtcttgaggtttcttgcatattggcctgtgcattttgagttttgatgtgcttgctgctgatccgaattccatctccgttgttgccgtaagattctgaatcgaattcatgcatttgtacggcagatttttttttcccccgctagatccgtatggtgtggttatttgggcgatgatagtatgggtccaagaaacgcggttttccctgtgaattgaggatctccaatttgcttctttggcttcggtccatggcagttgtgttctccaatcccatggttcatgctagacgcttcctgcagacaggactagacattttcagttttggtaactgtgaagattatggcattgttttaccaagagaaactgctgcattgtgatatgtaaaaaattaccctttttttccttctcttttagtagaattattacggaacatgcttcgcttggcgtctgtatcgatctacgttctttattctaaaaggctgtgcttttttgtgagcattgtcatccttttttttttcctttcaactccttctgttcatttaatgaacaattccgttctttctggtgttgatactgccacgttttactgattttccattattttattaattcctacttgacaagattcttatcgaacaattattgtgaatcttttagtaggaatctcgtaaagcgccagtgtcgcattttcctttgaggatctgatttttcccatcaagcaatggtgggatagccagtagtaaaatttaggctttcaggctcactccacatcagaaaattttctacttacatactatcgtttgtagaacaatcgtggaagtttatgcccttgctcAaaaaaaaaaaaagaacaatcgtggaagtggaaaaagggttccgtgaagcgcatagatcaataatgtctaatctcttttcactcataaaaatgttttgcaggatggatggacatacaaatggcactaatggttcctgctctaagccatgcgagccattaacagactactgcatccctgattacattctgaatcctgactctgaacaagtcctcgttgatcaggcaccatgttgccctgtagtagtattcatcaactctagaagtggcggccaactcggaagcagtttgatcaaaacgtatcgtgagcttctcaataaagcgcaggtacctaatctagtagtttgggaagatggaatgctgaaaagattcccttgagccatagtaggacttcatatcattctctcatattatctcatatttggatccacaatttttacaggtttttgatttatcagaagaggctcctgaaaaggtgcttcacagattgtattgcaactttgagaagctcaagtctaatggcgaccctattgcttttcaaattcagagcaacctaagactaattgtgagtagcctaactagaaaacataaagaatgatcTttttgctttaggatatgtcctcttaactaatgatctttgaaataggttgctggtggtgatggcacagcaagttggctgcttggtgtagttagtgaccttaagctctctcacccacctcctattgcaactgtgcctctgggaactggaaacaaccttccattctcatttggatgggtatgtctatgactattgttttgttccaacacatatattctcttcagttgtgataatctcctccctttagataattcacgcttgttgtgaatttgtgatcatatacgagctgtttttgttgttgagctgtttgacaacataagaaggtttagcattaagaaacatgcatttttgaattaatagtgaaatagtgatcatacgcttgatacctaaattttatgtcttattgactgtgagctgtgaggggtgcatgatttttcattctaaagtagaagattactgaatctgagattttcttgttagtttgatctggattccttggccgtctttttacctagtctgcataatctgcagccatgatctctgaatcttccctggcatctagttttatacctctattaaatttaatttgactgcaggggaagaagaacccaaccactgaccaagaggcggtgaaatcatttcttggacaagttaaaaaagcaagagaaatgaatattgataggtaatatctcaagcacacaatgttatatttgtttctgttttttctgtcatgcttgtgaaaagtacaagtcctgcccaataattcactgcgacagctctttcatatatgttgtgtagcagtcatttttagttttaaacatgagtaaaatgtaatcccttatatattctgcatatgaaagaaaacactcatttgaatgtacttttttaagttggcatatcatcatgaggatgcgagctccacaggaaggtccatgtgaacctattgctccgttagagctgcctcactcattgcatgcattccaccgtgtatcaggaagcgattcacttaatatggtaagacaactcactgtggatactgtttttacttgattctttctattacagaagtagtagccaatagccatggactttcacttttgaatagtatggacaattggacaggctgagaactgaatatatagatctttaagcttgcttagcagttttttcttttatatttttgttcaggagggctaccacacataccgtggaggattttggaattactttagtatgggtaagagttcctctggtatccaaggcacagcatgatgttttttttttttttggtttatgctagttcttgctctaacagatatcaaacagtcaccgttgttatccagtaccttttaatcaggacttgttaacaatattatcgtagaacatattttagtatcttttaagcatatcatgattaataaggcagtaatagaaacatggtcatcatgacttcacatactgcagggatggatgcacaagtgtcttacgaatttcactctgagaggaagagaaatcccgagaagttcaagaaccagctaacaaatcaggttcttctcgtttctgtagggcaagtcttgtggcacatttcattttgtttatgctgaatgttgtgatgcatttctttgatgcagagtacatatgctaagcttggacttaaacaaggatggtttgctgcttcactaactcacccatcctcgaggtagcctgtcactaatgcaaccatgatgcccctgatattgatcaaattatcctcattgatcggtgttagcatttcaagtaccacgcttagctattatatgcctttacgtcggatatgcatgacgtgtacagctcccattttcaggaacattgctcaacttgcaaaggtgcggatcatgaaaagacctggtggccaatgggaagagcttaagattcctcgcaggtaaataaatccttgcttcctttgcagtgtatttgtacaaggcaatttccattttgcttcatctaaaatgtctggttcttccaaaatcccaaccccattttccatctccaagtttcttagacacatttctagaatgttatcatcaccacagaatgtagctatgaaaatcaacatatattccctctattgtttcagcattcgatcaatcgtctgtctgaatctgccaagtttttctggaggactgaatccttggggaacacctggcaccaggaaagtacaagatgtaagtagagcacttgcctcttctgttgtcgtttcactcctaatggctttgccatgggcaaagaatttataagttttcatggcaatatgcagagagacctgactgcaccatttgtcgacgacggccttatcgaggttgtcggctttcgcgatgcctggcacggtcttgtcttgcttgcccctaatggccatggaactcgtctagcacaggtgatgcatctgttctcaacccatttcctgaactccctacatttcagctagcattgctgatgcagtcacacatttcacatttttcaggcccatagaatccggttcgagttccacaaaggagcagccgagcacacgttcatgaggatcgatggggagccatggaagcagcctcttcccaaggacgatgacaccgtggtcgtcgagatctctcacctccgtcaggtcaccatgctcgccagcgacccgtgcaagtcgaagagcgtcaacgacccctcgtcgccgatgtgctgtagcaaccacgacgacgacgagcgcaacagcttggaggacgaagatgagtgggaggaggggaggaagaagtttggtgcagctgatacgttcaagttccctgatgaggttgatgttgctcaccttagctgagctataagtgattcagagttcagatttcagaatgttcgctactactgttagcgatactgcctttttgggggtttatatatactactagtttattagttatcagccctgtgtagattcgaccggctgtattcgagaactgcaaaattttccgagtaatgtcatattttcatgcaacgcaattggtctattcccagaaaatcatgtcccaaaacaaa
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| CDS seq | atgaatattgatagttggcatatcatcatgaggatgcgagctccacaggaaggtccatgtgaacctattgctccgttagagctgcctcactcattgcatgcattccaccgtgtatcaggaagcgattcacttaatatggagggctaccacacataccgtggaggattttggaattactttagtatggggatggatgcacaagtgtcttacgaatttcactctgagaggaagagaaatcccgagaagttcaagaaccagctaacaaatcagagtacatatgctaagcttggacttaaacaaggatggtttgctgcttcactaactcacccatcctcgaggaacattgctcaacttgcaaaggtgcggatcatgaaaagacctggtggccaatgggaagagcttaagattcctcgcagcattcgatcaatcgtctgtctgaatctgccaagtttttctggaggactgaatccttggggaacacctggcaccaggaaagtacaagatagagacctgactgcaccatttgtcgacgacggccttatcgaggttgtcggctttcgcgatgcctggcacggtcttgtcttgcttgcccctaatggccatggaactcgtctagcacaggcccatagaatccggttcgagttccacaaaggagcagccgagcacacgttcatgaggatcgatggggagccatggaagcagcctcttcccaaggacgatgacaccgtggtcgtcgagatctctcacctccgtcaggtcaccatgctcgccagcgacccgtgcaagtcgaagagcgtcaacgacccctcgtcgccgatgtgctgtagcaaccacgacgacgacgagcgcaacagcttggaggacgaagatgagtgggaggaggggaggaagaagtttggtgcagctgatacgttcaagttccctgatgaggttgatgttgctcaccttagctga
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| Protein seq | MNIDSWHIIMRMRAPQEGPCEPIAPLELPHSLHAFHRVSGSDSLNMEGYHTYRGGFWNYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQLAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLRQVTMLASDPCKSKSVNDPSSPMCCSNHDDDERNSLEDEDEWEEGRKKFGAADTFKFPDEVDVAHLS |
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| Function | Diacylglycerol kinase 5 [UniProtKB/Swiss-Prot:Q9C5E5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0027990 | OsLiXu_04g0027990.01 | Chr04 | 34570547 | 34573733 | + | NAM | ||
| CDS seq | atgaatattgatagttggcatatcatcatgaggatgcgagctccacaggaaggtccatgtgaacctattgctccgttagagctgcctcactcattgcatgcattccaccgtgtatcaggaagcgattcacttaatatggagggctaccacacataccgtggaggattttggaattactttagtatggggatggatgcacaagtgtcttacgaatttcactctgagaggaagagaaatcccgagaagttcaagaaccagctaacaaatcagagtacatatgctaagcttggacttaaacaaggatggtttgctgcttcactaactcacccatcctcgaggaacattgctcaacttgcaaaggtgcggatcatgaaaagacctggtggccaatgggaagagcttaagattcctcgcagcattcgatcaatcgtctgtctgaatctgccaagtttttctggaggactgaatccttggggaacacctggcaccaggaaagtacaagatagagacctgactgcaccatttgtcgacgacggccttatcgaggttgtcggctttcgcgatgcctggcacggtcttgtcttgcttgcccctaatggccatggaactcgtctagcacaggcccatagaatccggttcgagttccacaaaggagcagccgagcacacgttcatgaggatcgatggggagccatggaagcagcctcttcccaaggacgatgacaccgtggtcgtcgagatctctcacctccgtcaggtcaccatgctcgccagcgacccgtgcaagtcgaagagcgtcaacgacccctcgtcgccgatgtgctgtagcaaccacgacgacgacgagcgcaacagcttggaggacgaagatgagtgggaggaggggaggaagaagtttggtgcagctgatacgttcaagttccctgatgaggttgatgttgctcaccttagctga
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| Protein seq | MNIDSWHIIMRMRAPQEGPCEPIAPLELPHSLHAFHRVSGSDSLNMEGYHTYRGGFWNYFSMGMDAQVSYEFHSERKRNPEKFKNQLTNQSTYAKLGLKQGWFAASLTHPSSRNIAQLAKVRIMKRPGGQWEELKIPRSIRSIVCLNLPSFSGGLNPWGTPGTRKVQDRDLTAPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLRQVTMLASDPCKSKSVNDPSSPMCCSNHDDDERNSLEDEDEWEEGRKKFGAADTFKFPDEVDVAHLS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0027990 | OsLiXu_04g0027990.02 | Chr04 | 34569130 | 34573690 | + | IsoSeq | ||
| CDS seq | acccgaattcagtcctcagcgagtcggaaacgcgccgaaagacgaactggaggcgcccccccaaatcttgagatcgcaggatggatggacatacaaatggcactaatggttcctgctctaagccatgcgagc |
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| Protein seq | TRIQSSASRKRAERRTGGAPPNLEIAGWMDIQMALMVPALSHAS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.105148 | 0.949667 | 1.091624 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0634700 | RBH | 0.307892 | 0.425230 | 1.821958 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g54200 | RBH | 0.205492 | 0.297182 | 0.462879 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0634700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027940 | RBH | 0.483489 | 11.739288 | 2.518612 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028710 | RBH | 0.000000 | 4.209058 | 2.131964 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028320 | RBH | 1.555191 | 20.945490 | 9.019446 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0028140 | RBH | 0.000000 | 0.183126 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028380 | RBH | 0.000000 | 25.670383 | 12.435102 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0509000 | RBH | 3.732514 | 30.5997 | 5.826033 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0027060 | RBH | 0.048194 | 1.480042 | 2.323651 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0513200 | RBH | 5.617254 | 31.3200855 | 20.515127 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027480 | RBH | 0.000000 | 0.125616 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027310 | RBH | 0.479139 | 3.229160 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0027370 | RBH | 0.0 | 13.556271 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0005200 | RBH | 0.518929 | 2.824915 | 2.412849 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027960 | RBH | 0.144354 | 12.877670 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G027360 | RBH | 0.291077 | 9.279588 | 3.267910 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0027230 | RBH | 0.000000 | 23.454027 | 5.058920 |
