Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_04G0504300		OGI:04094150 \| 13/16			Minghui 63 \| MH63RS3 \| HZAU			Chr04:33858984-33865966		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		prx56
DNA seq		TCTTCTCTTCAGCCTAAAAAATTTGGTCATTCCCTTTTTTTTTTTCACACTTTGAATCATAACGGTACGTTTAATTTATCCAATCACCTTTTTTTTTCACACTTTGATTTTCATGTGCTAGATGGATAACTGATGGTGGTATGACTGAATTTGATTCTTCAGAAGGCCTTTATTGGATTTATGGATTGAAGCCAACTTTGTATAGTTCAGTTTTCTAGCCCTTTTGCATGAAAAATATATTTGCAGCTGCTCATTTCTACTGCCGGTTAGTAGAACTGAATCTAAATATATTCAGATTTTTGCTCCTGGTGTGTTTCGTGCTCATATTATTGGATTGCCAAACCCTGCCATAAATTCATGAATTCATGAATTGCTGAGTCTCGGGAGATCAAAACTGCTCCGAGGAGGGAGAAAAGCGCGCGCGAATGGCGCTCCTAATGGGGGCGAAACCCACCGCCCCATTCTACTCCTCCCTGCTCCAGTGCTGCATCAGCTCCGGCGCATTCCGGCAAGGCAAGTCCGTCCACGGCAGGGTCGCCGCCGCGTCCGCCTCTCCTCCGGACCTGCACCTGAGCACCAAGCTCGTCATCTTCTACGCGCGGTTCGGCGACGTCGCTGCCGCCCGCAAGGTGTTCGACGGAATGCCGCACAGGAGCGTCGTGTCCTGGACGGCCATGGTCTCCGGCTACGCCAGGAACGGGCGCCCGCGGGAGGCGCTGGAGCTGTTCGCGCTCATGCGCGCGTCGGGCGCGCGGCCGAACCAGTTCACGTACGGGAGCGCCGCCAGCGCGTGCGCGGGGGCCAGGTGCGCCAGGAGCGGGGAGCAGGTGCACGCGTGCGCTGCCAAGGGGAGGTTTGCGGGCGACATGTTCGTGCAGAGCGCGCTCATGGACATGCACCTGAGGTGCGGGTTCGTGGAGGATGCGCGGCAGCTGTTCGCGGAGATGGGGAAGAAGGATGTAGTGTCCTGGAATGCCCTGATCAGGGGGTTTGTGGAACGCGGGCATGACAGTGATACGCTTGGATTATTCTCTTCAATGCTGAAAGAAGGTATGCCGTCCCTCCTTTTGCTTTAACAATCTTGAGCATTTTTCCTGTAATCATGCTGCCTATTATGTCCTAGCATGAAATTGCAAGGTAGTTTTTGCTGATGGTATTGGCACTAAAATTGAAAGTGCTTTCTTTTTTTTACATCAAAATAATTGACAGCGATGATTCCTGACCATTACACGCTTGGAAGTGCTCTAAAAGCATGTGGAATAGTCGGTGTTGCTGTCAATGTTGAGCTAATTCACAGTTGCATCATCAAATTGGGTTACTGGGATGAAAAGGTTGTCATCGGATCACTTATCAACTCTTACGCAAAATGTCGGAGTATGAGCAGCGCAAGAGTGATATATGATTCCATCTCTGAACCAGATCTCGTGTCATCAACCGCACTGATCAGTGGGTACACCATGGATAGAAACTACAGTGAAGATGCAATGGAGCTCTTCTGTAAAATTCATCGGAAGGGTTTATGGATTGATGGTGTTCTATTAAGCTCAGTGCTTTGCCTTTGTGCAAGCGTTGCTTCTGCAAGATTTGGGACACAAATTCATGCATATATGTGCAAGAAGCAGCCTATGGGTGATATTGCATTGGACAATGCTCTGGTTGATATGTATGCAAAGGCAGGAGAATTTTCAGATGCCAAGCGTGCTTTTGATGAAATGCCCTATCGGAATGTGATTTCTTGGACGTCACTTATTACTGCCTGTGGAAGAAACGGTTCTGGAGAAGATGCTGTGACTCTTTTTAATAGGATGGTGGAAGATGGTGTTAGGCCAAACGATGTGACATTCCTTTCTCTTCTATCTGCATGTGGTCATTGTGGTTTGACAAACAAAGGGATGGAGTGCTTTACTTCCATGATGAGCAGGTATGGTATTGATCCAAGAGCTGAGCATTACAGCTCTGCTATTGACCTTCTTGCTCGTGGAGGCCAGTTAGAAGATGCATGGAAACTTGTCCAGAAGACAAACTTAAAACCCAACTCATCAATGCTGGGTGCAATGCTTGGAGCCTGTAAATTGCATGGAAACATGCTTCTTGGAGAAACTGCAGCCAAGAACCTTTTTAGTATAGATCCTGGGAGTTCTGTAAACTATGCTGTTCTTGCAAACATGTATGCAGAATGTAGTCTATGGGAGGATGCACAGAGGACGAGAGAAGTAATAGATGAAACAACAGATGGAAAGGAAGTTGGTTTCAGTGTCATCTGAGTATGACAGAAACTTTTCCACTGCAAGAAATTTGTATCACAGTTTTTAGCCACTGATAGATGCATCAGATGAACCTCAAATTCTGGGCCACTTTGACAAGCCGCAACACACTTCAGAGTTCAGACTCCAGAGTTAACCAATTTCTGCCTGTTCAGTTAAACAGTGAATAGCTCATGACCTATTGACCTATCACAAATTCACCTGCCATCATGTTTGTTCAGTGTAAGTTTTTTGTTCATCTGACTTCTGTGGGTTACTTTCCTTGATAAATAATTTTCTGAACTGTTACTGTGCTTTAAATCTTAATTAGTCCCATAATTGTTTAGGACTGTAGATGTGTTTTTGCAAGTCACATAACGTTGATTAGACAGAATAATTATGGGATATTAACCCTTCTCTTTTAAAAGCAATTTTGATGTCCTATAAGAATATCGTAGAAAACATTTATTAAGTATTAACTAGACTGTGAGTTGCTGCTGAACATGACCAAAGGGGTTGGCATTTTTTTTCTTATGTGCATGAACAAGTCATGAGGTAAAAATTGGAGTACTGTTTAATTCCTATGGATAAGGTCGAACTTGTCAATGTCCACCATTGTTGAACAACTTCATGGTCAAAACTGTCCTGCACTCCCTTGCTGTTTGAGTGAAGCACACATTTTGAGCTAGGTCAACTAAAAATTTCTTTACCTGCTGTGAATGTCTTAGACTTGAATTCTTGAACAACCAAAAGACATCACTTTTCAGTTACTCCAAGAGTAATTGAATACATTGCCCAAGCCATGTGGTAGTGAACACTTAAACCATTGTTATCTCCTGTGGTGCAGGATTTTGACAATAGGGGTGAAGATGTAATGATGCACTAGTAGATAGTATGGAATATTGATAGAGAAAATTCCATGATTCCATTACAACAGACAGAAAAAAAAAACCTGCATTGATTTTTTATAGGGCATCTTTAAATTTCAAAATGTCAAATTATGTATATTTTGACCAGCAATTAATCAAATTAATATAATTAATATATATTTAGTGTGAAATTTGTGCCCATAGATTCATATTTCAAAGTGCGTTCACAAAATATTGGCTTTATAGCTATTAAGAATATAATTCTGAGAAATCAATGGCCAATGTTTAATCTTGAATTTTTGTTTTCAAATTAAAATATGCCCTATAAAGACCAATGGAATCTAAAAAAATAAAGAAAAATAAAGTTTGACATGTATTACATACAAAATTTTTAACACTTTGGGATTCTTATCTAAGTGCACATTGTATACGTACATGTAATCCTATATATTTGGTGTTTTTTCAAGTTTTAGGGGTGCATCTGTACCCCCACGCACTATGGTGTCCACCATTGGTTCTGTTCACTACTCCTGACTTGTTTTCACCTTTTTTTTTTTTATTATTCTCTGGAGAGCTCAGCGGAAGGTTATCTTGAGCCCAGCAGTTATTTATTAACTTAAAGGCTGCAACTAATATCTGACCAATGGACCGATTTTCTCAGTATGATAGGGATTCACTGAAGGTTTACTTACACAAACTCTTGCATTTTTTATTCAAACATAGAGAATCTTTTTCCATAACTTGCACATCATGTTCTCATCTTTCTTAGAGTGTTTATATGCTTGATCAAACCTAAATTTTGCTTCAAAATGAAGTATCTGCACATTGCCTGAGATGCTTCTGCACCCGTTTGGCATTCAATAATTAGCTAGCAGTGATCATGTTGATTCTCTTCTAACTTTTCTCCCTTGATTTGCTTCATTGACACGAGCACAACTGTCATGCAACCTTTTTTTTTCTCAACTTAATTTCAAAGGAAGAAGATTGATTTCATCAAACAATGGGTTGTTGCTTTGATATTATTTACTTTAACTGACTGGTGCCAGTTAAGAAATTATTATGGGCAGTTCCTTTAGTGTTCAGATGCAATCCCAAGAGAAACTAGCAGTGATAATGTCATAGCGAGGCAACCATATTATATTCCCTGGTTCCCTTAAATACTAACAAAACAGGAAATGGATTGTTTTTCTTTCTTTTCCACTTTGCATGAACATACACAATTTCCTCTGGAACAAACGATAACGGATAAACTGATATATTATCTCATATCTTTGAATCCTTCTGAACTTCTTTACCAGAATAAATTCAACCCATATAATATTTAAAATAAAAAATTAGAACAGCTAGAGAGTATTACCTTTTAGCAACATGTCGTGACCTATTCATCAATACAAGAGCCTGTATTACTCACAAGTGCACAAGCCACGAAGGATGACCACCACCAACTAATTATGCAATATTACCAGGTAATACTATCTAGATGCCTGATCCAAGACTTGCGTATTCTTCAATTGAAGTACATGCACACAACTCATAGGGCTTGTAAAATCTCGATCTCCAAGTCTTAGACCATCTGCTTGTTGCATTAGGAAAAATAAAATGAAGCTGTGGGAAATGGCTTATGTCACTTGTTTACTATACTACAACCTAAGCAACTGAGCTATAAAGCAGGCTGCAAGTTATAATTTGCCTCAACAATCATAGAAGGCAACTCTTTCATCATAGGCAGTGGTTCCACAGTAGTCATGCACAACATGCCTTACAGACTCCTCTTCGGATTTGTCCTTTCTCTTGTCCTACAGTTCTCCTTAGTATTATCCAATCCACCAGGGCTAAACATTGGCTTTTACCAATACACATGTCCAAAAGCAGAGGTCATTGTTCGTGATGAGATGACCAAGATCATATCCCGAGTTCCAAGTCTCGCAGGCCCTCTACTTCGCATGCATTTCCATGATTGTTTTGTGAATGTATGCATACTGCTTACCATGCTCTGAGCTGTTTTGATTTTGAATTGAGTTTATCCTACTAAGCTATGTGCCTCCATGTGTTTTGCAGGGTTGCGATGGCTCTATACTTCTGGATAGCACACCAGGATCACCATCTGAGAAGGAATCAATACCAAACCTCAGTCTGCGAGGTTTTGGCACAATAGACCGTGTCAAAGCTAAGCTGGAGCAAGCCTGCCCTGGAGTTGTGTCCTGTGCTGATATCCTTGCTCTGGTAGCCAGAGATGTTGTCTTCTTGGTAAGAACTAGCTTCCATGTTCATTAATCTTAGTTCATTCTTTAGTTAGAAAAGTTAGTATAGTTTGGCTAAGTGGTGAGAATTGGCTGTTTTAGGCCAACAATAGTGGAAAACCACACAGTTTGATTTTCACCATATTCTACGTGGCTATTGGATTTCTTGCTGCTTACAGTAACTAGAACTATAGTTGAGAAAAGTCCCTATTCTTCCCTTGTGCAACAGACCAAAGGGCCTCACTGGGAAGTTCCAACTGGGCGGAGGGATGGGACAAGATCAGTGAAGGATGATGCTGTGAACAACCTCCCTCCCCCCTTCTTCGATGCCACGCGGAACTTGTATCAATTCTTCATCCCAAAGGGCCTTGACGCAAAGGATCAGGTGGTTCTGCTAGGTATATACTATTCTTCACTAACTTCAATGTTTAATCTTCATAGACTAGCTCCCTAGATGATTTATACTGTACTTACTGAAAGTTGCAACTCTCGGTTCTGTTGCCTGTGCTCCTTTTAAACACTCTGCTGATCCCGATATATCCCAGTAGCATTCTCCAATAAAGGTGATCACTTATTTAATTACTATACAACTTGTTAATAAAGGAAGGTATCATATGCGCATACCAAGTCAACAAAATGGGAAGTACAAAACTATGTGGTTCTTAGTTCTAATCACATGGCACAGTACAGAACCAAGCCAGGAGACCAAGACCACTTTATCCTCAAACACAGCATAGCTCTTTATTCGAGTGGTCAAAACATCGTTTCCTGTTCAGCACCATACTCATTTGTGCACTTGCAAAATTCATGGTTTTAAATAGCGGGTTAAGATATTTAGCGATTGACCTTCTCAAACAGCTATAGCGAATTTAATGGAGCTATAGTGGCTAAGACTCTTCTCAAACAGCTATAGCCAGAGATTCAAAACCATGGCAAAATTGCAATCCAAACTTGTTTAATTACCAAGAACTCATCACAAATGTGCATATGCAATTTGAGAAGTGACACATTGTTCACAGGTGGGCACACTCTTGGAACCTCCCATTGTTCATCCTTCGCCAGCCGGCTGTACAACTTCAGCGGCACGATGATGGCCGACCCGACGCTGGACAAGTACTACGTGCCGAGGCTGAAGAGCAAGTGCCAGCCCGGCGACAAGACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAGGACGTTCGACACCAGCTACTACAGGCACATCGCCAGGGGCAGGGCGCTCTTCACCTCCGACGAGACGCTCATGCTCGACCCTTTCACCAGGGGCTACATCCTCCGCCAGGCCGGCGTCGCCGGCTACCCGGCGGAGTTCTTCGCCGACTTCGCGGCGTCCATGGTGAAGATGGGGAACATGCAGGTGCTCACCGGCGCCCAGGGGGAGATCAGGAAGCACTGTGCCTTTGTGAATTAGGCTGCAAATATATATACAACCGCTGAACTGCATTTGTCTGAAGTGTTAGCTGTTTGATATTCCTTGGTATATGTAGAATTATTGTGAAATATGTTTTGTTATGCCTTTGTTTGTATTATGATGTACAATCAAAGTAAACTATTTGCTTCATTCAAGGAAATAAAATGTTGCGTAATGCCTTCGGTGTTACATGTTTGAT More
CDS seq		ATGGCGCTCCTAATGGGGGCGAAACCCACCGCCCCATTCTACTCCTCCCTGCTCCAGTGCTGCATCAGCTCCGGCGCATTCCGGCAAGGCAAGTCCGTCCACGGCAGGGTCGCCGCCGCGTCCGCCTCTCCTCCGGACCTGCACCTGAGCACCAAGCTCGTCATCTTCTACGCGCGGTTCGGCGACGTCGCTGCCGCCCGCAAGGTGTTCGACGGAATGCCGCACAGGAGCGTCGTGTCCTGGACGGCCATGGTCTCCGGCTACGCCAGGAACGGGCGCCCGCGGGAGGCGCTGGAGCTGTTCGCGCTCATGCGCGCGTCGGGCGCGCGGCCGAACCAGTTCACGTACGGGAGCGCCGCCAGCGCGTGCGCGGGGGCCAGGTGCGCCAGGAGCGGGGAGCAGGTGCACGCGTGCGCTGCCAAGGGGAGGTTTGCGGGCGACATGTTCGTGCAGAGCGCGCTCATGGACATGCACCTGAGGTGCGGGTTCGTGGAGGATGCGCGGCAGCTGTTCGCGGAGATGGGGAAGAAGGATGTAGTGTCCTGGAATGCCCTGATCAGGGGGTTTGTGGAACGCGGGCATGACAGTGATACGCTTGGATTATTCTCTTCAATGCTGAAAGAAGCGATGATTCCTGACCATTACACGCTTGGAAGTGCTCTAAAAGCATGTGGAATAGTCGGTGTTGCTGTCAATGTTGAGCTAATTCACAGTTGCATCATCAAATTGGGTTACTGGGATGAAAAGGTTGTCATCGGATCACTTATCAACTCTTACGCAAAATGTCGGAGTATGAGCAGCGCAAGAGTGATATATGATTCCATCTCTGAACCAGATCTCGTGTCATCAACCGCACTGATCAGTGGGTACACCATGGATAGAAACTACAGTGAAGATGCAATGGAGCTCTTCTGTAAAATTCATCGGAAGGGTTTATGGATTGATGGTGTTCTATTAAGCTCAGTGCTTTGCCTTTGTGCAAGCGTTGCTTCTGCAAGATTTGGGACACAAATTCATGCATATATGTGCAAGAAGCAGCCTATGGGTGATATTGCATTGGACAATGCTCTGGTTGATATGTATGCAAAGGCAGGAGAATTTTCAGATGCCAAGCGTGCTTTTGATGAAATGCCCTATCGGAATGTGATTTCTTGGACGTCACTTATTACTGCCTGTGGAAGAAACGGTTCTGGAGAAGATGCTGTGACTCTTTTTAATAGGATGGTGGAAGATGGTGTTAGGCCAAACGATGTGACATTCCTTTCTCTTCTATCTGCATGTGGTCATTGTGGTTTGACAAACAAAGGGATGGAGTGCTTTACTTCCATGATGAGCAGGTATGGTATTGATCCAAGAGCTGAGCATTACAGCTCTGCTATTGACCTTCTTGCTCGTGGAGGCCAGTTAGAAGATGCATGGAAACTTGTCCAGAAGACAAACTTAAAACCCAACTCATCAATGCTGGGTGCAATGCTTGGAGCCTGTAAATTGCATGGAAACATGCTTCTTGGAGAAACTGCAGCCAAGAACCTTTTTAGTATAGATCCTGGGAGTTCTGTAAACTATGCTGTTCTTGCAAACATGTATGCAGAATGTAGTCTATGGGAGGATGCACAGAGGACGAGAGAAGTAATAGATGAAACAACAGATGGAAAGGAAGTTGGTTTCAGTGTCATCTGA More
Protein seq		MALLMGAKPTAPFYSSLLQCCISSGAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGARCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGFVEDARQLFAEMGKKDVVSWNALIRGFVERGHDSDTLGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMECFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKEVGFSVI
Function		Pentatricopeptide repeat-containing protein At3g20730 [UniProtKB/Swiss-Prot:Q9LT48]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0504300	OsMH63_04T0504300-mRNA-1	Chr04	33858984	33865966	+	maker
CDS seq	ATGGCGCTCCTAATGGGGGCGAAACCCACCGCCCCATTCTACTCCTCCCTGCTCCAGTGCTGCATCAGCTCCGGCGCATTCCGGCAAGGCAAGTCCGTCCACGGCAGGGTCGCCGCCGCGTCCGCCTCTCCTCCGGACCTGCACCTGAGCACCAAGCTCGTCATCTTCTACGCGCGGTTCGGCGACGTCGCTGCCGCCCGCAAGGTGTTCGACGGAATGCCGCACAGGAGCGTCGTGTCCTGGACGGCCATGGTCTCCGGCTACGCCAGGAACGGGCGCCCGCGGGAGGCGCTGGAGCTGTTCGCGCTCATGCGCGCGTCGGGCGCGCGGCCGAACCAGTTCACGTACGGGAGCGCCGCCAGCGCGTGCGCGGGGGCCAGGTGCGCCAGGAGCGGGGAGCAGGTGCACGCGTGCGCTGCCAAGGGGAGGTTTGCGGGCGACATGTTCGTGCAGAGCGCGCTCATGGACATGCACCTGAGGTGCGGGTTCGTGGAGGATGCGCGGCAGCTGTTCGCGGAGATGGGGAAGAAGGATGTAGTGTCCTGGAATGCCCTGATCAGGGGGTTTGTGGAACGCGGGCATGACAGTGATACGCTTGGATTATTCTCTTCAATGCTGAAAGAAGCGATGATTCCTGACCATTACACGCTTGGAAGTGCTCTAAAAGCATGTGGAATAGTCGGTGTTGCTGTCAATGTTGAGCTAATTCACAGTTGCATCATCAAATTGGGTTACTGGGATGAAAAGGTTGTCATCGGATCACTTATCAACTCTTACGCAAAATGTCGGAGTATGAGCAGCGCAAGAGTGATATATGATTCCATCTCTGAACCAGATCTCGTGTCATCAACCGCACTGATCAGTGGGTACACCATGGATAGAAACTACAGTGAAGATGCAATGGAGCTCTTCTGTAAAATTCATCGGAAGGGTTTATGGATTGATGGTGTTCTATTAAGCTCAGTGCTTTGCCTTTGTGCAAGCGTTGCTTCTGCAAGATTTGGGACACAAATTCATGCATATATGTGCAAGAAGCAGCCTATGGGTGATATTGCATTGGACAATGCTCTGGTTGATATGTATGCAAAGGCAGGAGAATTTTCAGATGCCAAGCGTGCTTTTGATGAAATGCCCTATCGGAATGTGATTTCTTGGACGTCACTTATTACTGCCTGTGGAAGAAACGGTTCTGGAGAAGATGCTGTGACTCTTTTTAATAGGATGGTGGAAGATGGTGTTAGGCCAAACGATGTGACATTCCTTTCTCTTCTATCTGCATGTGGTCATTGTGGTTTGACAAACAAAGGGATGGAGTGCTTTACTTCCATGATGAGCAGGTATGGTATTGATCCAAGAGCTGAGCATTACAGCTCTGCTATTGACCTTCTTGCTCGTGGAGGCCAGTTAGAAGATGCATGGAAACTTGTCCAGAAGACAAACTTAAAACCCAACTCATCAATGCTGGGTGCAATGCTTGGAGCCTGTAAATTGCATGGAAACATGCTTCTTGGAGAAACTGCAGCCAAGAACCTTTTTAGTATAGATCCTGGGAGTTCTGTAAACTATGCTGTTCTTGCAAACATGTATGCAGAATGTAGTCTATGGGAGGATGCACAGAGGACGAGAGAAGTAATAGATGAAACAACAGATGGAAAGGAAGTTGGTTTCAGTGTCATCTGA More
Protein seq	MALLMGAKPTAPFYSSLLQCCISSGAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGARCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGFVEDARQLFAEMGKKDVVSWNALIRGFVERGHDSDTLGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMECFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKEVGFSVI More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0504300	OsMH63_04T0504300-mRNA-2	Chr04	33858984	33865966	+	maker
CDS seq	ATGGCGCTCCTAATGGGGGCGAAACCCACCGCCCCATTCTACTCCTCCCTGCTCCAGTGCTGCATCAGCTCCGGCGCATTCCGGCAAGGCAAGTCCGTCCACGGCAGGGTCGCCGCCGCGTCCGCCTCTCCTCCGGACCTGCACCTGAGCACCAAGCTCGTCATCTTCTACGCGCGGTTCGGCGACGTCGCTGCCGCCCGCAAGGTGTTCGACGGAATGCCGCACAGGAGCGTCGTGTCCTGGACGGCCATGGTCTCCGGCTACGCCAGGAACGGGCGCCCGCGGGAGGCGCTGGAGCTGTTCGCGCTCATGCGCGCGTCGGGCGCGCGGCCGAACCAGTTCACGTACGGGAGCGCCGCCAGCGCGTGCGCGGGGGCCAGGTGCGCCAGGAGCGGGGAGCAGGTGCACGCGTGCGCTGCCAAGGGGAGGTTTGCGGGCGACATGTTCGTGCAGAGCGCGCTCATGGACATGCACCTGAGGTGCGGGTTCGTGGAGGATGCGCGGCAGCTGTTCGCGGAGATGGGGAAGAAGGATGTAGTGTCCTGGAATGCCCTGATCAGGGGGTTTGTGGAACGCGGGCATGACAGTGATACGCTTGGATTATTCTCTTCAATGCTGAAAGAAGCGATGATTCCTGACCATTACACGCTTGGAAGTGCTCTAAAAGCATGTGGAATAGTCGGTGTTGCTGTCAATGTTGAGCTAATTCACAGTTGCATCATCAAATTGGGTTACTGGGATGAAAAGGTTGTCATCGGATCACTTATCAACTCTTACGCAAAATGTCGGAGTATGAGCAGCGCAAGAGTGATATATGATTCCATCTCTGAACCAGATCTCGTGTCATCAACCGCACTGATCAGTGGGTACACCATGGATAGAAACTACAGTGAAGATGCAATGGAGCTCTTCTGTAAAATTCATCGGAAGGGTTTATGGATTGATGGTGTTCTATTAAGCTCAGTGCTTTGCCTTTGTGCAAGCGTTGCTTCTGCAAGATTTGGGACACAAATTCATGCATATATGTGCAAGAAGCAGCCTATGGGTGATATTGCATTGGACAATGCTCTGGTTGATATGTATGCAAAGGCAGGAGAATTTTCAGATGCCAAGCGTGCTTTTGATGAAATGCCCTATCGGAATGTGATTTCTTGGACGTCACTTATTACTGCCTGTGGAAGAAACGGTTCTGGAGAAGATGCTGTGACTCTTTTTAATAGGATGGTGGAAGATGGTGTTAGGCCAAACGATGTGACATTCCTTTCTCTTCTATCTGCATGTGGTCATTGTGGTTTGACAAACAAAGGGATGGAGTGCTTTACTTCCATGATGAGCAGGTATGGTATTGATCCAAGAGCTGAGCATTACAGCTCTGCTATTGACCTTCTTGCTCGTGGAGGCCAGTTAGAAGATGCATGGAAACTTGTCCAGAAGACAAACTTAAAACCCAACTCATCAATGCTGGGTGCAATGCTTGGAGCCTGTAAATTGCATGGAAACATGCTTCTTGGAGAAACTGCAGCCAAGAACCTTTTTAGTATAGATCCTGGGAGTTCTGTAAACTATGCTGTTCTTGCAAACATGTATGCAGAATGTAGTCTATGGGAGGATGCACAGAGGACGAGAGAAGTAATAGATGAAACAACAGATGGAAAGGAAGTTGGTTTCAGTGTCATCTGA More
Protein seq	MALLMGAKPTAPFYSSLLQCCISSGAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGARCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGFVEDARQLFAEMGKKDVVSWNALIRGFVERGHDSDTLGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMECFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKEVGFSVI More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0504300	OsMH63_04T0504300-mRNA-3	Chr04	33858984	33865966	+	maker
CDS seq	ATGGCGCTCCTAATGGGGGCGAAACCCACCGCCCCATTCTACTCCTCCCTGCTCCAGTGCTGCATCAGCTCCGGCGCATTCCGGCAAGGCAAGTCCGTCCACGGCAGGGTCGCCGCCGCGTCCGCCTCTCCTCCGGACCTGCACCTGAGCACCAAGCTCGTCATCTTCTACGCGCGGTTCGGCGACGTCGCTGCCGCCCGCAAGGTGTTCGACGGAATGCCGCACAGGAGCGTCGTGTCCTGGACGGCCATGGTCTCCGGCTACGCCAGGAACGGGCGCCCGCGGGAGGCGCTGGAGCTGTTCGCGCTCATGCGCGCGTCGGGCGCGCGGCCGAACCAGTTCACGTACGGGAGCGCCGCCAGCGCGTGCGCGGGGGCCAGGTGCGCCAGGAGCGGGGAGCAGGTGCACGCGTGCGCTGCCAAGGGGAGGTTTGCGGGCGACATGTTCGTGCAGAGCGCGCTCATGGACATGCACCTGAGGTGCGGGTTCGTGGAGGATGCGCGGCAGCTGTTCGCGGAGATGGGGAAGAAGGATGTAGTGTCCTGGAATGCCCTGATCAGGGGGTTTGTGGAACGCGGGCATGACAGTGATACGCTTGGATTATTCTCTTCAATGCTGAAAGAAGCGATGATTCCTGACCATTACACGCTTGGAAGTGCTCTAAAAGCATGTGGAATAGTCGGTGTTGCTGTCAATGTTGAGCTAATTCACAGTTGCATCATCAAATTGGGTTACTGGGATGAAAAGGTTGTCATCGGATCACTTATCAACTCTTACGCAAAATGTCGGAGTATGAGCAGCGCAAGAGTGATATATGATTCCATCTCTGAACCAGATCTCGTGTCATCAACCGCACTGATCAGTGGGTACACCATGGATAGAAACTACAGTGAAGATGCAATGGAGCTCTTCTGTAAAATTCATCGGAAGGGTTTATGGATTGATGGTGTTCTATTAAGCTCAGTGCTTTGCCTTTGTGCAAGCGTTGCTTCTGCAAGATTTGGGACACAAATTCATGCATATATGTGCAAGAAGCAGCCTATGGGTGATATTGCATTGGACAATGCTCTGGTTGATATGTATGCAAAGGCAGGAGAATTTTCAGATGCCAAGCGTGCTTTTGATGAAATGCCCTATCGGAATGTGATTTCTTGGACGTCACTTATTACTGCCTGTGGAAGAAACGGTTCTGGAGAAGATGCTGTGACTCTTTTTAATAGGATGGTGGAAGATGGTGTTAGGCCAAACGATGTGACATTCCTTTCTCTTCTATCTGCATGTGGTCATTGTGGTTTGACAAACAAAGGGATGGAGTGCTTTACTTCCATGATGAGCAGGTATGGTATTGATCCAAGAGCTGAGCATTACAGCTCTGCTATTGACCTTCTTGCTCGTGGAGGCCAGTTAGAAGATGCATGGAAACTTGTCCAGAAGACAAACTTAAAACCCAACTCATCAATGCTGGGTGCAATGCTTGGAGCCTGTAAATTGCATGGAAACATGCTTCTTGGAGAAACTGCAGCCAAGAACCTTTTTAGTATAGATCCTGGGAGTTCTGTAAACTATGCTGTTCTTGCAAACATGTATGCAGAATGTAGTCTATGGGAGGATGCACAGAGGACGAGAGAAGTAATAGATGAAACAACAGATGGAAAGGAAGTTGGTTTCAGTGTCATCTGA More
Protein seq	MALLMGAKPTAPFYSSLLQCCISSGAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGARCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGFVEDARQLFAEMGKKDVVSWNALIRGFVERGHDSDTLGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMECFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKEVGFSVI More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_04G0504300	OsMH63_04T0504300-mRNA-4	Chr04	33863789	33865966	+	maker
CDS seq	ATGCACAACATGCCTTACAGACTCCTCTTCGGATTTGTCCTTTCTCTTGTCCTACAGTTCTCCTTAGTATTATCCAATCCACCAGGGCTAAACATTGGCTTTTACCAATACACATGTCCAAAAGCAGAGGTCATTGTTCGTGATGAGATGACCAAGATCATATCCCGAGTTCCAAGTCTCGCAGGCCCTCTACTTCGCATGCATTTCCATGATTGTTTTGTGAATGGTTGCGATGGCTCTATACTTCTGGATAGCACACCAGGATCACCATCTGAGAAGGAATCAATACCAAACCTCAGTCTGCGAGGTTTTGGCACAATAGACCGTGTCAAAGCTAAGCTGGAGCAAGCCTGCCCTGGAGTTGTGTCCTGTGCTGATATCCTTGCTCTGGTAGCCAGAGATGTTGTCTTCTTGACCAAAGGGCCTCACTGGGAAGTTCCAACTGGGCGGAGGGATGGGACAAGATCAGTGAAGGATGATGCTGTGAACAACCTCCCTCCCCCCTTCTTCGATGCCACGCGGAACTTGTATCAATTCTTCATCCCAAAGGGCCTTGACGCAAAGGATCAGGTGGTTCTGCTAGGTGGGCACACTCTTGGAACCTCCCATTGTTCATCCTTCGCCAGCCGGCTGTACAACTTCAGCGGCACGATGATGGCCGACCCGACGCTGGACAAGTACTACGTGCCGAGGCTGAAGAGCAAGTGCCAGCCCGGCGACAAGACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAGGACGTTCGACACCAGCTACTACAGGCACATCGCCAGGGGCAGGGCGCTCTTCACCTCCGACGAGACGCTCATGCTCGACCCTTTCACCAGGGGCTACATCCTCCGCCAGGCCGGCGTCGCCGGCTACCCGGCGGAGTTCTTCGCCGACTTCGCGGCGTCCATGGTGAAGATGGGGAACATGCAGGTGCTCACCGGCGCCCAGGGGGAGATCAGGAAGCACTGTGCCTTTGTGAATTAG More
Protein seq	MHNMPYRLLFGFVLSLVLQFSLVLSNPPGLNIGFYQYTCPKAEVIVRDEMTKIISRVPSLAGPLLRMHFHDCFVNGCDGSILLDSTPGSPSEKESIPNLSLRGFGTIDRVKAKLEQACPGVVSCADILALVARDVVFLTKGPHWEVPTGRRDGTRSVKDDAVNNLPPPFFDATRNLYQFFIPKGLDAKDQVVLLGGHTLGTSHCSSFASRLYNFSGTMMADPTLDKYYVPRLKSKCQPGDKTTLVEMDPGSFRTFDTSYYRHIARGRALFTSDETLMLDPFTRGYILRQAGVAGYPAEFFADFAASMVKMGNMQVLTGAQGEIRKHCAFVN More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.6044875	2.2685025	0.626502

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0628200	RBH	0.792670	0.490270	0.570278
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g53630	RBH	0.171437	0.295733	0.309417
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0628200	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0027530	RBH	0.000000	1.483817	0.985000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0028310	RBH	0.0	0.0	0.596139
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0028030	RBH	0.000000	2.685291	2.655260
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0027800	RBH	0.021298	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0028050	RBH	0.257029	3.577488	2.603250
Minghui 63 \| MH63RS3 \| HZAU	NA	NA	NA	NA	NA
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0026740	RBH	0.079403	0.0	0.397540
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0508300	RBH	0.720227	1.53749	6.414073
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0027140	RBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0027000	RBH	0.0	1.708247	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0027030	RBH	0.0	12.018981	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0027560	RBH	0.121027	0.0	0.341765
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0027650	RBH	0.073138	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G026940	RBH	0.166059	0.000000	1.032663
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0026860	RBH	0.420042	0.0	0.694143

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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