Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0238900 | OGI:04049310 | 6/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:15501738-15502588 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGACGGCGGATCGGGTGCCAGCGCCAACCGCCTCGCCGAATCCAGGCCGTCCATTCCTCCGCTCGGTCGGGCGCCCCGCATCCTATTAAGCCTGAGCCCCACCCACCCCCCACCCCCGAACCCTCGCCCTCCTCCTCACCCCGCGCACCCCCTCCACCTCGCCGCCGCCGCCACCGCCGCCGACTCGCCGGGGCTCGCCGCCACCGGTGGTGGGGGGGAGCTCGACCTCCTCGCCCCACGCGCGCGTCCGGACGCCGTCGTTCTGGGCGCGGGAGAGATCCGTCCGTCGCCCCCCGCTGGGCTTGCGCCATCCTCTCGCCGGGTAAGCCCTAGGTTTTTTTTTTTTTTGGTCCGATCGATTCCGCCGCGCTCCTAGCCGCGGGTGAGGCAGGAATCGGGGTGGTTGCGGGGGGCTCGTCGTGCGGTCGAGGGATTTGGTTGTTCCTAGTAGGAGGGGTTGTACTTGTTCATCCCGTCGATCCAGTGGAGGCGCGTGGGAGATCTCGGTTGGGGGTTTCCGTGGGCTCCGTGGGTTGCCGCTCGCGGTGCAGCGGCGGGATGTGGATGGGGATGGGGATGGCGTGGTGGGCCGTAGGTGCGAGCAACCCTAGACGGATTTTTTTTTTGTGGCCATTTTAGGGTTTACGGGAATGGATTTTTTTTTTACCGAACAAGAGATGTACTCTGAAAATTGCTGTCTTTTCGTAGCGAGGGGCCTATAGGATCATTGAAGCCTTAGGGACTTAGGGTTTGGGCTGCTTGCAGCTGTATTTCTCATTTGTAAACATTAGACTTCCGTGTCTGCTGTGGGAGGATGAAAGAATTGACTTGGGAGCTGAGTTCTATTAG
More
|
||||||||||
| CDS seq | ATGGACGGCGGATCGGGTGCCAGCGCCAACCGCCTCGCCGAATCCAGGCCGTCCATTCCTCCGCTCGGTCGGGCGCCCCGCATCCTATTAAGCCTGAGCCCCACCCACCCCCCACCCCCGAACCCTCGCCCTCCTCCTCACCCCGCGCACCCCCTCCACCTCGCCGCCGCCGCCACCGCCGCCGACTCGCCGGGGCTCGCCGCCACCGGTGGTGGGGGGGAGCTCGACCTCCTCGCCCCACGCGCGCGTCCGGACGCCGTCGTTCTGGGCGCGGGAGAGATCCGTCCGTCGCCCCCCGCTGGGCTTGCGCCATCCTCTCGCCGGCTGTATTTCTCATTTGTAAACATTAGACTTCCGTGTCTGCTGTGGGAGGATGAAAGAATTGACTTGGGAGCTGAGTTCTATTAG
More
|
||||||||||
| Protein seq | MDGGSGASANRLAESRPSIPPLGRAPRILLSLSPTHPPPPNPRPPPHPAHPLHLAAAATAADSPGLAATGGGGELDLLAPRARPDAVVLGAGEIRPSPPAGLAPSSRRLYFSFVNIRLPCLLWEDERIDLGAEFY |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0238900 | OsMH63_04T0238900.1 | Chr04 | 15501738 | 15502588 | + | maker | ||
| CDS seq | ATGGACGGCGGATCGGGTGCCAGCGCCAACCGCCTCGCCGAATCCAGGCCGTCCATTCCTCCGCTCGGTCGGGCGCCCCGCATCCTATTAAGCCTGAGCCCCACCCACCCCCCACCCCCGAACCCTCGCCCTCCTCCTCACCCCGCGCACCCCCTCCACCTCGCCGCCGCCGCCACCGCCGCCGACTCGCCGGGGCTCGCCGCCACCGGTGGTGGGGGGGAGCTCGACCTCCTCGCCCCACGCGCGCGTCCGGACGCCGTCGTTCTGGGCGCGGGAGAGATCCGTCCGTCGCCCCCCGCTGGGCTTGCGCCATCCTCTCGCCGGCTGTATTTCTCATTTGTAAACATTAGACTTCCGTGTCTGCTGTGGGAGGATGAAAGAATTGACTTGGGAGCTGAGTTCTATTAG
More
|
|||||||
| Protein seq | MDGGSGASANRLAESRPSIPPLGRAPRILLSLSPTHPPPPNPRPPPHPAHPLHLAAAATAADSPGLAATGGGGELDLLAPRARPDAVVLGAGEIRPSPPAGLAPSSRRLYFSFVNIRLPCLLWEDERIDLGAEFY |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.6323535 | 7.2500615 | 14.1154205 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0008520 | RBH | 0.000000 | 0.625984 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0008300 | RBH | 18.175541 | 34.787590 | 53.019886 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0305600 | SBH | 4.827434 | 14.2017075 | 10.6131765 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0235300 | RBH | 19.8437055 | 30.7134305 | 52.020357 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0008070 | RBH | 0.0 | 13.857971 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
