Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0229800 | OGI:04047500 | 14/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:14924298-14930802 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTTGAAACATGGCAGTTGTCATCCGGTTGATATTCTGCCTATATAAACTTTTCAAATGCAATCAAAATACATGCCCACGCAATATAAGTTTTTCAAACATGGCAATATAAGTTTTTCGAAGTAGTACTTTTGAAAAACATGGCAGGTGTCATCCGGTTGATATTCCACCTATATAAGTTTTTCAAACGCAATCTAAAATACATGGCCGCACAAGGCGCGGGCTACCTTCCTAGTTTTTGATAAAAAAAAGGACAGAATGAAAATACACCAAGGAATCATAACACATATACATCCGGCCCAGCCTGCAGTTTGGCTTAAGGTCTGAACTGCCACCTTGCTCAACATTCCCTTCATCGTCTTCCCATTGATGCCTAAAGCCCTGCTGATGCAACGCCATTGCGCCATGATGCCTCGTCTGCAGAATCAGTTTGACAAATTGATTAACAAACATGACCAGAGATAGCAGTGAGTCTCATTTACAGGGAGCAGAAGGCAGCAAAGGGACTTCGAGTCTTAATTAGTGTCTTACCTTGAGAGCTATGGATATCATAGGATTATTTTTTCGAGAATGTGCTGGATCTTTTCCCAATTTTCTCCATTCTGTTTGCAAGACCTTGTGAACTCGTGTCCGCAGTTTGAGAGTTTAAAACGCGAAAGAGACTGCGGCAGTGTTGGCAGCACCTTCATATTCTTGCAGTGGGAGATCATCAGAACTTTGAGAGTCCTGACTTGCTCCATGTTATCTGGCAAGGTGTGCCAGCTTAAGTGAGAGAGACAGAGCGATTCCAGATGAAGGAAGCACTCAAAAAGTCTAGGAGCAGGTCCCAGTGGGCTGCATTGGCGGAGCTCAAGTTTCTGAAGGTACAGTTGAGCACTATGCTTACCCACCATCCAGCCAGGGTATGAACCACGGTAGCCTATGATTTCCAGGACTTCAAGCCCCATTGGCGGGCATAGACACTCGAGTACTGCTGCATCGTGGTTACTGCTTGGGTTATCATCGTCCCAGGCCAGTGTCAGTTGTTTGAGGTGCTCCTTCTCAGCTAACTTCGCTTCAACGGCTTCCTCCTCGCTGCGAACATGTTGGAGACCACTGATCACCAATTTTCCCTGGAGCTTGTTTAGGTGCTTCAGCTGCTTAATGTCGTAACCCAGGAGGTCCCTTTTCACCCTGAAGGTTGGTAATGTTCGGAGCAATGTCAGCTTGCCTATGTTTGGAAAATCCCCAAGTGAACGGCCTACCACTCTCTGCAAGTTCACAAGGTTACTCATATTTTCAGGGGAGCAACTACGTTCCAACATTCCATATTCACCAAAATCAAGCACCCGCAAGTGGTAAAGCTTTGTAACCGTGCGCGGAAAAAATATACGGCATCTATACTCGATAGAAAGATATCGTAGATACTTTAAGTAACCAATAGATTCTGGGATTTGCAATGTTCTTCTACTCTGTGTCTCTACAATCAGTACTCGTAGAGACTTCAAGCTGTCGAAGATATCATCGAACACCTTTGCCTCAATTCCTGTCTCCCCTCCGTCAATGATCAGAGTGCGCAGCTCCTTCAGTTTGACAATATTTTCGGTAATCATTTTCTCGAAAGCTTTATTGCCAGCAACTGTTGCTCCATTACAAGCCTTAATATACAAATGGCGAACATCGTCTCGAGGAACTTGTCCTGTGCAGCCACCCTCAATTCTGCAGCAATCACTACGTCCGACCGTCTCTGCTAAATCCTGCAGCAGATCATGAAGTAAATAGTACTCCTCGCCCGACGAGTCCTTTCGTTCGAGCTGCAGAAACGAGGTCGCCACTAATTTGTGGAAGTAATCTCCTCCAACTTCCTCTGTGCTTATGAACCCTTCTGCTGCCCACAAGTTAATTAACTTACTGCGTCCCAAATGATGCCCTCTGGGAAAAATACTGCAGTAAGCAAAGCATCGTCTAACTCTCTCATCAAGAAGCTGGTAGCTCCACCGCAGAGCTTCCATTGCGTCACTGAAAAAATCCTTATCTCGTACACTCCTCCAAAACTCAACATCTTGCCTTATACGCAATTGTCCTCCCACTGTTCTTGCTGCCAGAGGTGATCCCTTCAGTTTCTTTGCAATGTCAGCCCCAATCATCTGCAGTACTATTCGATCTCGCTCACATATCTCTGCACCGTCAAGTGCATATTGCAAGAACAATTCTCGGAAGACATGCTCATCTAACTTAGATATTGGAATGCATTTCGATCTCACAGCACCCAAAGCCAATAAAGCATCTCTAGTTCGACTGGTTGCTAGAATCTTGCTTCCTGCTCCCCCAACTTCCAATGCAGAAAGATCATCCTCGCTTATATCCTTATTATGCTCGACATCATCTAGTACCAACAGGAAACGCTTTTCGCGCAGGTCTTGTTTCAATCTTTTCTGTAAAGCAGTAAGACTTTTGAACTGAGGGCATGGTTGCTTTGTAGCCTGTTCAATCATCTCCCTCAAGATGGTGTCCAGGCCAAAATTCTGGGAGACATGAATCCACATCACAATGTCGAAGTGGTTGGCTTCCTCGTCGTACTCGCAAACATACTGTGCAAGAGTTGTCTTCCCAGACCCAGGGATGCCGTGAATGCCAATAACGGAAAAACATCTATCAGCACTTGACTGGTTTTCATCACGAAGCATACTTATTATTTCCTCACGATCCTTGTCTCGACCGATTACCTTGCGTGGCAGATATGCAGCGGTGGGCTTCGATGTATGTTTGGCAGTGACACCAACGTATCGTCTATGATCGCCACTTTCATTATTATTGCCTGGCAGGTTAGCTAACTTAGTAATGTCCTGTGCTTTCTCAATTAGCTTCTCTATCTTATCTAGTTTTTCTTTCAAACGGCATCTTGAATATCCTGCCGTTAACTTGGTACCATCAGCCTACAAATCCAAGTAAACACTGAGCTAGTTGGAGAACAGTGAATTAATAAGTAGTCTGAATTGATCTGAACTATGTAAGAGACGCTGTGCAATTGTACATAGAGATTTGCAAATTATCCAAATTTCCAACACAATTCCTAGCTAAAAAAAATGAGCTGACTTTTGTATATGTATGGTGTCCTATTGCTGAAAAATAGATTTTACACGTTATGTAACAAGAATATCATATTAACATATATATTCTCTTAGGTTTTATTTTAATTGACGTTTTGGACAATGACACGGTCTACAAAATATATCTTTGACATTTTTTTCTATTATAATATACTCCCTCCATCTATTTTTTATAGTCATATTTCCAAATCTGAAATTTTTATTTTTGATAGGCATATTTCAATCCAATAACCTATCATCTTAACGAATTTCTCGGATTTAATGCGTGTCTCTCCATTCTTCCACACAAGATTGGCTACATGGACAACGAGAAATATAAATATTAATGAATCGCTTGTTTACGAGGAATAACTATTAGAATGTTTAAATGGATGATAAGTAGAATTACTTATCTTTGGTCCGTGTGCCAAGATTAATTATGACTATCAAAGTAGATGGAGGGAGCATATAATAAATAAATATATGTTTACTTTATTATAGTGTTTTGAAAGACAAATCTCTTTCTAGTTCCTTTAAACTAAACTAGCACGATGGCCCGCGCAAATTGCGCGGCTAGCTACCAATATTCTTTTTTTATAATTTTGAATTTTTATTATTTCTAAATTATATTTTTATATAGACTCTAAATTATTTTTCCAATATTTCTTTTTAAAAATTTTAAATTTCAATTATAAATTTATTTCTATATGGACTTCTAATTTTTATTTTTCAATTTCAAATTTTAGTTAGTTCTAAATTATATAAAGGTGTGGGCTCTAATACTTTCTTTCAATATTTATTATTTTTAATTCTGAATTCCATCTATTTAAAATTGTATTTCTATATGGACTCTATTATTCTTTTTAATCCAAATTTTTAATATTTTTAAATTTTATTTCAACATAGACTCTTCTTAAAATTTTCTTCATTTTTTATTCCAAATTTTAGATATATATTAAATTATATTTATATTTATAAATAGTTTTATTTTCATTTAGGTAGTTGAAGAGAATTCTTTATTCTGAATTTCAGATATATTGAAATATATTTCCATTTGAACTCTATTTTTTTCTATTTAATATGGAAATTTGTAGAAAGTGGAAGCGAATATGGTGGCCTTTTTTTGTTAGACTAAGATATACTATTATAGACATATAAATGCATAGAGTATGCAGGTATGACCGTATGAACCTACCATTAGAGATTTGATTTGTTGCAACGGGGAGAATAGATCGAGATAAGCACTTGTGATTTGTACTATACACGGTTACTGTAGCCCAGCTTAGGTTTTTTTTTTCCTTGGAAAAGACTTCCAAGACTAATCATTCTATGCAGCTGTCCGATCGGACACATTTTTTTTTTCTAAAAAAAGTTCTTATATACAATAAATTTTCCTTATATATTTTTTATTCTGCTTATTTCTATATTGACTCTAATCTCTACTTTTAGTTTTCTTATTTTTTTTAATTCTGAATTTTTATTAGTTCTATTGTCTACCGGTATGGACTATATTCTTATCTTCCTATATTCCATATTTTTAATCATAATTTCAGCTATTTTTAAATTGTATATTCCTATATGGACTCTGTTTTTTCTTTTTCTCCGATTAATATGAGAATTTCTAGGCCATGAGAGCGAATGTGGAGGTTTTTTTTTTCTATTTCTTTAATAAGTTAATAGATATTTTTAAAGTTATTGATGGTCAAAGTTATAAAAAAAGTTTGACCTCTAAAACTTTAATAATTATGACACCGGAGGGAGTACACCGTTTCACCCAAATATTATATATCTTTTTTTACTACACGACAAAAGCACATGAACAAACACAACAACACGCACATCCATTATTTGACTTGAATTATTACGGCTATATTATAAGCCAGAAATAAATAATAATTATTACGGCTATATTATAAGCCAGAAATTTAATATTTATATGATGAAGACTTGAATTCTTACAGAAATATTGTTTGTATCTTTAGCTTTCTTCTAGTTATTTTGTATTGTACTAAGACTGTGTTCGGCAACTTGAGTGGAGAGCTCATTAATACCTATCGCACGTAAAACGGAACAACTCATTACCACATAATTAATTAAATATTAATTATTTGCTTAGAAAAATGGATTAATATAATTTTTTAAAGCAACTTTTCTATACAAATTAAATATTAACTATTTGCTTAGAAAAGTGGATTAATATGATTTTTTAAAGCAGCTTTCGTATACAAATTCTATTAACAGTACAGGAAGCGTGCAAAAAAAAACGCGGTGGAGTTGAAAATTCACACCACCAAACACAAAGTTGGCGTGACTTTTGTTTAAGGAAAGAAAATACGTTTGTCTTTCAGCGATGTTGATCTGATTTCTGATTCTCAACTACCAAATTGCTCATTATGGTTTCGTTCCAAGCCAGGCAGGGTTTAATCCTCTTTCAAAAATAAAAATAAAAAAATCAAATCAAATATGCACTCAATCCGTAAAAAGACGAACAACCAAGTACTGTGCGCGCTCTCTTTGTGTGTGTTTTTCTTTTTAATCAAGTACTCCCTCCATACTCGTAAAGAAAGTCGTTTAGAATAATATTTAAGTCAAACGTTAGGAATATAAATCATTAATAACTCTCAACTTTGAAAATGTAAAACTTATATGAATAGTTGTCTTAAAAAATAATTTCATAAAAGTATACATATATCACTTTTTAATAAATATTTTTATAAAAAATGAGTAGTCAAAGTTGTGTTTTGAAGACCGTATTGATATGCTAAACGATTTCCTTTACGAGTACACGGAGGAAGTATGTGCTGTTGAACTGATGGAAACAGAGATTGGGAGAACCGACCTGGTACGAGGACCCAACATCATTAAAATCCAAGGGGAACTTGCGTTTCTTGGAGCGGGCTAGTTGTTTCTCCAGACGACAGTACTCCGCATCATCCAGGATGTCTTCCACCTGATAGAAAGCCGACTTGAGCTCCTTCACCAGTTTCTCCAGCTCATGCCTCTGGCTGATCTCCAGTGCTCCCAGAGTGAGCGCCAGCCGAGGGAGAGTGCAGGTCTCCAGGTCGCGGATCTTCTTCGGCACGTTCAAGGTGATGCGGGGGCAGACGCTGTTCACGAGCTTGGCGACGATGGGGGAGATGATCCACCCTGCGGTGGATATGGCCCATCCCACTGCAGCTACCGACACCGGATCCATCACTCAACTCAAAAATGGGGAGAAATATTTGGAGACAGGCTATGGATCGAGCAAGCTCTCGGTAGATCTTGCAATTGGGTAGGTGATCGATGCTACCTATATATTTTGAGGACAAACGCAGTACTTTCAGATCTCAAGAAGGTTAGGCTAAATAAAACTCTAGACAGTACAGGAACCCAGGAATCTTGAAGCATATATCCGGTATCCCTCGTGACTGTCATGTGAGTCAGCAGGAAAGAAATT
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| CDS seq | ATGGATCCGGTGTCGGTAGCTGCAGTGGGATGGGCCATATCCACCGCAGGGTGGATCATCTCCCCCATCGTCGCCAAGCTCGTGAACAGCGTCTGCCCCCGCATCACCTTGAACGTGCCGAAGAAGATCCGCGACCTGGAGACCTGCACTCTCCCTCGGCTGGCGCTCACTCTGGGAGCACTGGAGATCAGCCAGAGGCATGAGCTGGAGAAACTGGTGAAGGAGCTCAAGTCGGCTTTCTATCAGGTGGAAGACATCCTGGATGATGCGGAGTACTGTCGTCTGGAGAAACAACTAGCCCGCTCCAAGAAACGCAAGTTCCCCTTGGATTTTAATGATGTTGGGTCCTCGTACCAGGCTGATGGTACCAAGTTAACGGCAGGATATTCAAGATGCCGTTTGAAAGAAAAACTAGATAAGATAGAGAAGCTAATTGAGAAAGCACAGGACATTACTAAGTTAGCTAACCTGCCAGGCAATAATAATGAAAGTGGCGATCATAGACGATACGTTGGTGTCACTGCCAAACATACATCGAAGCCCACCGCTGCATATCTGCCACGCAAGGTAATCGGTCGAGACAAGGATCGTGAGGAAATAATAAGTATGCTTCGTGATGAAAACCAGTCAAGTGCTGATAGATGTTTTTCCGTTATTGGCATTCACGGCATCCCTGGGTCTGGGAAGACAACTCTTGCACAGTATGTTTGCGAGTACGACGAGGAAGCCAACCACTTCGACATTGTGATGTGGATTCATGTCTCCCAGAATTTTGGCCTGGACACCATCTTGAGGGAGATGATTGAACAGGCTACAAAGCAACCATGCCCTCAGTTCAAAAGTCTTACTGCTTTACAGAAAAGATTGAAACAAGACCTGCGCGAAAAGCGTTTCCTGTTGGTACTAGATGATGTCGAGCATAATAAGGATATAAGCGAGGATGATCTTTCTGCATTGGAAGTTGGGGGAGCAGGAAGCAAGATTCTAGCAACCAGTCGAACTAGAGATGCTTTATTGGCTTTGGGTGCTGTGAGATCGAAATGCATTCCAATATCTAAGTTAGATGAGCATGTCTTCCGAGAATTGTTCTTGCAATATGCACTTGACGGTGCAGAGATATGTGAGCGAGATCGAATAGTACTGCAGATGATTGGGGCTGACATTGCAAAGAAACTGAAGGGATCACCTCTGGCAGCAAGAACAGTGGGAGGACAATTGCGTATAAGGCAAGATGTTGAGTTTTGGAGGAGTGTACGAGATAAGGATTTTTTCAGTGACGCAATGGAAGCTCTGCGGTGGAGCTACCAGCTTCTTGATGAGAGAGTTAGACGATGCTTTGCTTACTGCAGTATTTTTCCCAGAGGGCATCATTTGGGACGCAGTAAGTTAATTAACTTGTGGGCAGCAGAAGGGTTCATAAGCACAGAGGAAGTTGGAGGAGATTACTTCCACAAATTAGTGGCGACCTCGTTTCTGCAGCTCGAACGAAAGGACTCGTCGGGCGAGGAGTACTATTTACTTCATGATCTGCTGCAGGATTTAGCAGAGACGGTCGGACGTAGTGATTGCTGCAGAATTGAGGGTGGCTGCACAGGACAAGTTCCTCGAGACGATGTTCGCCATTTGTATATTAAGGCTTGTAATGGAGCAACAGTTGCTGGCAATAAAGCTTTCGAGAAAATGATTACCGAAAATATTGTCAAACTGAAGGAGCTGCGCACTCTGATCATTGACGGAGGGGAGACAGGAATTGAGGCAAAGGTGTTCGATGATATCTTCGACAGCTTGAAGTCTCTACGAGTACTGATTGTAGAGACACAGAGTAGAAGAACATTGCAAATCCCAGAATCTATTGGTTACTTAAAGTATCTACGATATCTTTCTATCGAGTATAGATGCCGTATATTTTTTCCGCGCACGGTTACAAAGCTTTACCACTTGCGGGTGCTTGATTTTGGTGAATATGGAATGTTGGAACGTAGTTGCTCCCCTGAAAATATGAGTAACCTTGTGAACTTGCAGAGAGTGGTAGGCCGTTCACTTGGGGATTTTCCAAACATAGGCAAGCTGACATTGCTCCGAACATTACCAACCTTCAGGGTGAAAAGGGACCTCCTGGGTTACGACATTAAGCAGCTGAAGCACCTAAACAAGCTCCAGGGAAAATTGGTGATCAGTGGTCTCCAACATGTTCGCAGCGAGGAGGAAGCCGTTGAAGCGAAGTTAGCTGAGAAGGAGCACCTCAAACAACTGACACTGGCCTGGGACGATGATAACCCAAGCAGTAACCACGATGCAGCAGTACTCGAGTGTCTATGCCCGCCAATGGGGCTTGAAGTCCTGGAAATCATAGGCTACCGTGGTTCATACCCTGGCTGGATGGTGGGTAAGCATAGTGCTCAACTGTACCTTCAGAAACTTGAGCTCCGCCAATGCAGCCCACTGGGACCTGCTCCTAGACTTTTTGAGTGCTTCCTTCATCTGGAATCGCTCTGTCTCTCTCACTTAAGCTGGCACACCTTGCCAGATAACATGGAGCAAGTCAGGACTCTCAAAGTTCTGATGATCTCCCACTGCAAGAATATGAAGGTCTTGCAAACAGAATGGAGAAAATTGGGAAAAGATCCAGCACATTCTCGAAAAAATAATCCTATGATATCCATAGCTCTCAAGACGAGGCATCATGGCGCAATGGCGTTGCATCAGCAGGGCTTTAGGCATCAATGGGAAGACGATGAAGGGAATGTTGAGCAAGGTGGCAGTTCAGACCTTAAGCCAAACTGCAGGCTGGGCCGGATGTATATGTGTTATGATTCCTTGGTGTATTTTCATTCTGTCCTTTTTTTTATCAAAAACTAG
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| Protein seq | MDPVSVAAVGWAISTAGWIISPIVAKLVNSVCPRITLNVPKKIRDLETCTLPRLALTLGALEISQRHELEKLVKELKSAFYQVEDILDDAEYCRLEKQLARSKKRKFPLDFNDVGSSYQADGTKLTAGYSRCRLKEKLDKIEKLIEKAQDITKLANLPGNNNESGDHRRYVGVTAKHTSKPTAAYLPRKVIGRDKDREEIISMLRDENQSSADRCFSVIGIHGIPGSGKTTLAQYVCEYDEEANHFDIVMWIHVSQNFGLDTILREMIEQATKQPCPQFKSLTALQKRLKQDLREKRFLLVLDDVEHNKDISEDDLSALEVGGAGSKILATSRTRDALLALGAVRSKCIPISKLDEHVFRELFLQYALDGAEICERDRIVLQMIGADIAKKLKGSPLAARTVGGQLRIRQDVEFWRSVRDKDFFSDAMEALRWSYQLLDERVRRCFAYCSIFPRGHHLGRSKLINLWAAEGFISTEEVGGDYFHKLVATSFLQLERKDSSGEEYYLLHDLLQDLAETVGRSDCCRIEGGCTGQVPRDDVRHLYIKACNGATVAGNKAFEKMITENIVKLKELRTLIIDGGETGIEAKVFDDIFDSLKSLRVLIVETQSRRTLQIPESIGYLKYLRYLSIEYRCRIFFPRTVTKLYHLRVLDFGEYGMLERSCSPENMSNLVNLQRVVGRSLGDFPNIGKLTLLRTLPTFRVKRDLLGYDIKQLKHLNKLQGKLVISGLQHVRSEEEAVEAKLAEKEHLKQLTLAWDDDNPSSNHDAAVLECLCPPMGLEVLEIIGYRGSYPGWMVGKHSAQLYLQKLELRQCSPLGPAPRLFECFLHLESLCLSHLSWHTLPDNMEQVRTLKVLMISHCKNMKVLQTEWRKLGKDPAHSRKNNPMISIALKTRHHGAMALHQQGFRHQWEDDEGNVEQGGSSDLKPNCRLGRMYMCYDSLVYFHSVLFFIKN |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0229800 | OsMH63_04T0229800-mRNA-1 | Chr04 | 14924298 | 14930802 | - | maker | ||
| CDS seq | ATGGATCCGGTGTCGGTAGCTGCAGTGGGATGGGCCATATCCACCGCAGGGTGGATCATCTCCCCCATCGTCGCCAAGCTCGTGAACAGCGTCTGCCCCCGCATCACCTTGAACGTGCCGAAGAAGATCCGCGACCTGGAGACCTGCACTCTCCCTCGGCTGGCGCTCACTCTGGGAGCACTGGAGATCAGCCAGAGGCATGAGCTGGAGAAACTGGTGAAGGAGCTCAAGTCGGCTTTCTATCAGGTGGAAGACATCCTGGATGATGCGGAGTACTGTCGTCTGGAGAAACAACTAGCCCGCTCCAAGAAACGCAAGTTCCCCTTGGATTTTAATGATGTTGGGTCCTCGTACCAGGCTGATGGTACCAAGTTAACGGCAGGATATTCAAGATGCCGTTTGAAAGAAAAACTAGATAAGATAGAGAAGCTAATTGAGAAAGCACAGGACATTACTAAGTTAGCTAACCTGCCAGGCAATAATAATGAAAGTGGCGATCATAGACGATACGTTGGTGTCACTGCCAAACATACATCGAAGCCCACCGCTGCATATCTGCCACGCAAGGTAATCGGTCGAGACAAGGATCGTGAGGAAATAATAAGTATGCTTCGTGATGAAAACCAGTCAAGTGCTGATAGATGTTTTTCCGTTATTGGCATTCACGGCATCCCTGGGTCTGGGAAGACAACTCTTGCACAGTATGTTTGCGAGTACGACGAGGAAGCCAACCACTTCGACATTGTGATGTGGATTCATGTCTCCCAGAATTTTGGCCTGGACACCATCTTGAGGGAGATGATTGAACAGGCTACAAAGCAACCATGCCCTCAGTTCAAAAGTCTTACTGCTTTACAGAAAAGATTGAAACAAGACCTGCGCGAAAAGCGTTTCCTGTTGGTACTAGATGATGTCGAGCATAATAAGGATATAAGCGAGGATGATCTTTCTGCATTGGAAGTTGGGGGAGCAGGAAGCAAGATTCTAGCAACCAGTCGAACTAGAGATGCTTTATTGGCTTTGGGTGCTGTGAGATCGAAATGCATTCCAATATCTAAGTTAGATGAGCATGTCTTCCGAGAATTGTTCTTGCAATATGCACTTGACGGTGCAGAGATATGTGAGCGAGATCGAATAGTACTGCAGATGATTGGGGCTGACATTGCAAAGAAACTGAAGGGATCACCTCTGGCAGCAAGAACAGTGGGAGGACAATTGCGTATAAGGCAAGATGTTGAGTTTTGGAGGAGTGTACGAGATAAGGATTTTTTCAGTGACGCAATGGAAGCTCTGCGGTGGAGCTACCAGCTTCTTGATGAGAGAGTTAGACGATGCTTTGCTTACTGCAGTATTTTTCCCAGAGGGCATCATTTGGGACGCAGTAAGTTAATTAACTTGTGGGCAGCAGAAGGGTTCATAAGCACAGAGGAAGTTGGAGGAGATTACTTCCACAAATTAGTGGCGACCTCGTTTCTGCAGCTCGAACGAAAGGACTCGTCGGGCGAGGAGTACTATTTACTTCATGATCTGCTGCAGGATTTAGCAGAGACGGTCGGACGTAGTGATTGCTGCAGAATTGAGGGTGGCTGCACAGGACAAGTTCCTCGAGACGATGTTCGCCATTTGTATATTAAGGCTTGTAATGGAGCAACAGTTGCTGGCAATAAAGCTTTCGAGAAAATGATTACCGAAAATATTGTCAAACTGAAGGAGCTGCGCACTCTGATCATTGACGGAGGGGAGACAGGAATTGAGGCAAAGGTGTTCGATGATATCTTCGACAGCTTGAAGTCTCTACGAGTACTGATTGTAGAGACACAGAGTAGAAGAACATTGCAAATCCCAGAATCTATTGGTTACTTAAAGTATCTACGATATCTTTCTATCGAGTATAGATGCCGTATATTTTTTCCGCGCACGGTTACAAAGCTTTACCACTTGCGGGTGCTTGATTTTGGTGAATATGGAATGTTGGAACGTAGTTGCTCCCCTGAAAATATGAGTAACCTTGTGAACTTGCAGAGAGTGGTAGGCCGTTCACTTGGGGATTTTCCAAACATAGGCAAGCTGACATTGCTCCGAACATTACCAACCTTCAGGGTGAAAAGGGACCTCCTGGGTTACGACATTAAGCAGCTGAAGCACCTAAACAAGCTCCAGGGAAAATTGGTGATCAGTGGTCTCCAACATGTTCGCAGCGAGGAGGAAGCCGTTGAAGCGAAGTTAGCTGAGAAGGAGCACCTCAAACAACTGACACTGGCCTGGGACGATGATAACCCAAGCAGTAACCACGATGCAGCAGTACTCGAGTGTCTATGCCCGCCAATGGGGCTTGAAGTCCTGGAAATCATAGGCTACCGTGGTTCATACCCTGGCTGGATGGTGGGTAAGCATAGTGCTCAACTGTACCTTCAGAAACTTGAGCTCCGCCAATGCAGCCCACTGGGACCTGCTCCTAGACTTTTTGAGTGCTTCCTTCATCTGGAATCGCTCTGTCTCTCTCACTTAAGCTGGCACACCTTGCCAGATAACATGGAGCAAGTCAGGACTCTCAAAGTTCTGATGATCTCCCACTGCAAGAATATGAAGGTCTTGCAAACAGAATGGAGAAAATTGGGAAAAGATCCAGCACATTCTCGAAAAAATAATCCTATGATATCCATAGCTCTCAAGACGAGGCATCATGGCGCAATGGCGTTGCATCAGCAGGGCTTTAGGCATCAATGGGAAGACGATGAAGGGAATGTTGAGCAAGGTGGCAGTTCAGACCTTAAGCCAAACTGCAGGCTGGGCCGGATGTATATGTGTTATGATTCCTTGGTGTATTTTCATTCTGTCCTTTTTTTTATCAAAAACTAG
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| Protein seq | MDPVSVAAVGWAISTAGWIISPIVAKLVNSVCPRITLNVPKKIRDLETCTLPRLALTLGALEISQRHELEKLVKELKSAFYQVEDILDDAEYCRLEKQLARSKKRKFPLDFNDVGSSYQADGTKLTAGYSRCRLKEKLDKIEKLIEKAQDITKLANLPGNNNESGDHRRYVGVTAKHTSKPTAAYLPRKVIGRDKDREEIISMLRDENQSSADRCFSVIGIHGIPGSGKTTLAQYVCEYDEEANHFDIVMWIHVSQNFGLDTILREMIEQATKQPCPQFKSLTALQKRLKQDLREKRFLLVLDDVEHNKDISEDDLSALEVGGAGSKILATSRTRDALLALGAVRSKCIPISKLDEHVFRELFLQYALDGAEICERDRIVLQMIGADIAKKLKGSPLAARTVGGQLRIRQDVEFWRSVRDKDFFSDAMEALRWSYQLLDERVRRCFAYCSIFPRGHHLGRSKLINLWAAEGFISTEEVGGDYFHKLVATSFLQLERKDSSGEEYYLLHDLLQDLAETVGRSDCCRIEGGCTGQVPRDDVRHLYIKACNGATVAGNKAFEKMITENIVKLKELRTLIIDGGETGIEAKVFDDIFDSLKSLRVLIVETQSRRTLQIPESIGYLKYLRYLSIEYRCRIFFPRTVTKLYHLRVLDFGEYGMLERSCSPENMSNLVNLQRVVGRSLGDFPNIGKLTLLRTLPTFRVKRDLLGYDIKQLKHLNKLQGKLVISGLQHVRSEEEAVEAKLAEKEHLKQLTLAWDDDNPSSNHDAAVLECLCPPMGLEVLEIIGYRGSYPGWMVGKHSAQLYLQKLELRQCSPLGPAPRLFECFLHLESLCLSHLSWHTLPDNMEQVRTLKVLMISHCKNMKVLQTEWRKLGKDPAHSRKNNPMISIALKTRHHGAMALHQQGFRHQWEDDEGNVEQGGSSDLKPNCRLGRMYMCYDSLVYFHSVLFFIKN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0229800 | OsMH63_04T0229800-mRNA-2 | Chr04 | 14924298 | 14930802 | - | maker | ||
| CDS seq | ATGGATCCGGTGTCGGTAGCTGCAGTGGGATGGGCCATATCCACCGCAGGGTGGATCATCTCCCCCATCGTCGCCAAGCTCGTGAACAGCGTCTGCCCCCGCATCACCTTGAACGTGCCGAAGAAGATCCGCGACCTGGAGACCTGCACTCTCCCTCGGCTGGCGCTCACTCTGGGAGCACTGGAGATCAGCCAGAGGCATGAGCTGGAGAAACTGGTGAAGGAGCTCAAGTCGGCTTTCTATCAGGTGGAAGACATCCTGGATGATGCGGAGTACTGTCGTCTGGAGAAACAACTAGCCCGCTCCAAGAAACGCAAGTTCCCCTTGGATTTTAATGATGTTGGGTCCTCGTACCAGGCTGATGGTACCAAGTTAACGGCAGGATATTCAAGATGCCGTTTGAAAGAAAAACTAGATAAGATAGAGAAGCTAATTGAGAAAGCACAGGACATTACTAAGTTAGCTAACCTGCCAGGCAATAATAATGAAAGTGGCGATCATAGACGATACGTTGGTGTCACTGCCAAACATACATCGAAGCCCACCGCTGCATATCTGCCACGCAAGGTAATCGGTCGAGACAAGGATCGTGAGGAAATAATAAGTATGCTTCGTGATGAAAACCAGTCAAGTGCTGATAGATGTTTTTCCGTTATTGGCATTCACGGCATCCCTGGGTCTGGGAAGACAACTCTTGCACAGTATGTTTGCGAGTACGACGAGGAAGCCAACCACTTCGACATTGTGATGTGGATTCATGTCTCCCAGAATTTTGGCCTGGACACCATCTTGAGGGAGATGATTGAACAGGCTACAAAGCAACCATGCCCTCAGTTCAAAAGTCTTACTGCTTTACAGAAAAGATTGAAACAAGACCTGCGCGAAAAGCGTTTCCTGTTGGTACTAGATGATGTCGAGCATAATAAGGATATAAGCGAGGATGATCTTTCTGCATTGGAAGTTGGGGGAGCAGGAAGCAAGATTCTAGCAACCAGTCGAACTAGAGATGCTTTATTGGCTTTGGGTGCTGTGAGATCGAAATGCATTCCAATATCTAAGTTAGATGAGCATGTCTTCCGAGAATTGTTCTTGCAATATGCACTTGACGGTGCAGAGATATGTGAGCGAGATCGAATAGTACTGCAGATGATTGGGGCTGACATTGCAAAGAAACTGAAGGGATCACCTCTGGCAGCAAGAACAGTGGGAGGACAATTGCGTATAAGGCAAGATGTTGAGTTTTGGAGGAGTGTACGAGATAAGGATTTTTTCAGTGACGCAATGGAAGCTCTGCGGTGGAGCTACCAGCTTCTTGATGAGAGAGTTAGACGATGCTTTGCTTACTGCAGTATTTTTCCCAGAGGGCATCATTTGGGACGCAGTAAGTTAATTAACTTGTGGGCAGCAGAAGGGTTCATAAGCACAGAGGAAGTTGGAGGAGATTACTTCCACAAATTAGTGGCGACCTCGTTTCTGCAGCTCGAACGAAAGGACTCGTCGGGCGAGGAGTACTATTTACTTCATGATCTGCTGCAGGATTTAGCAGAGACGGTCGGACGTAGTGATTGCTGCAGAATTGAGGGTGGCTGCACAGGACAAGTTCCTCGAGACGATGTTCGCCATTTGTATATTAAGGCTTGTAATGGAGCAACAGTTGCTGGCAATAAAGCTTTCGAGAAAATGATTACCGAAAATATTGTCAAACTGAAGGAGCTGCGCACTCTGATCATTGACGGAGGGGAGACAGGAATTGAGGCAAAGGTGTTCGATGATATCTTCGACAGCTTGAAGTCTCTACGAGTACTGATTGTAGAGACACAGAGTAGAAGAACATTGCAAATCCCAGAATCTATTGGTTACTTAAAGTATCTACGATATCTTTCTATCGAGTATAGATGCCGTATATTTTTTCCGCGCACGGTTACAAAGCTTTACCACTTGCGGGTGCTTGATTTTGGTGAATATGGAATGTTGGAACGTAGTTGCTCCCCTGAAAATATGAGTAACCTTGTGAACTTGCAGAGAGTGGTAGGCCGTTCACTTGGGGATTTTCCAAACATAGGCAAGCTGACATTGCTCCGAACATTACCAACCTTCAGGGTGAAAAGGGACCTCCTGGGTTACGACATTAAGCAGCTGAAGCACCTAAACAAGCTCCAGGGAAAATTGGTGATCAGTGGTCTCCAACATGTTCGCAGCGAGGAGGAAGCCGTTGAAGCGAAGTTAGCTGAGAAGGAGCACCTCAAACAACTGACACTGGCCTGGGACGATGATAACCCAAGCAGTAACCACGATGCAGCAGTACTCGAGTGTCTATGCCCGCCAATGGGGCTTGAAGTCCTGGAAATCATAGGCTACCGTGGTTCATACCCTGGCTGGATGGTGGGTAAGCATAGTGCTCAACTGTACCTTCAGAAACTTGAGCTCCGCCAATGCAGCCCACTGGGACCTGCTCCTAGACTTTTTGAGTGCTTCCTTCATCTGGAATCGCTCTGTCTCTCTCACTTAAGCTGGCACACCTTGCCAGATAACATGGAGCAAGTCAGGACTCTCAAAGTTCTGATGATCTCCCACTGCAAGAATATGAAGACGAGGCATCATGGCGCAATGGCGTTGCATCAGCAGGGCTTTAGGCATCAATGGGAAGACGATGAAGGGAATGTTGAGCAAGGTGGCAGTTCAGACCTTAAGCCAAACTGCAGGCTGGGCCGGATGTATATGTGTTATGATTCCTTGGTGTATTTTCATTCTGTCCTTTTTTTTATCAAAAACTAG
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| Protein seq | MDPVSVAAVGWAISTAGWIISPIVAKLVNSVCPRITLNVPKKIRDLETCTLPRLALTLGALEISQRHELEKLVKELKSAFYQVEDILDDAEYCRLEKQLARSKKRKFPLDFNDVGSSYQADGTKLTAGYSRCRLKEKLDKIEKLIEKAQDITKLANLPGNNNESGDHRRYVGVTAKHTSKPTAAYLPRKVIGRDKDREEIISMLRDENQSSADRCFSVIGIHGIPGSGKTTLAQYVCEYDEEANHFDIVMWIHVSQNFGLDTILREMIEQATKQPCPQFKSLTALQKRLKQDLREKRFLLVLDDVEHNKDISEDDLSALEVGGAGSKILATSRTRDALLALGAVRSKCIPISKLDEHVFRELFLQYALDGAEICERDRIVLQMIGADIAKKLKGSPLAARTVGGQLRIRQDVEFWRSVRDKDFFSDAMEALRWSYQLLDERVRRCFAYCSIFPRGHHLGRSKLINLWAAEGFISTEEVGGDYFHKLVATSFLQLERKDSSGEEYYLLHDLLQDLAETVGRSDCCRIEGGCTGQVPRDDVRHLYIKACNGATVAGNKAFEKMITENIVKLKELRTLIIDGGETGIEAKVFDDIFDSLKSLRVLIVETQSRRTLQIPESIGYLKYLRYLSIEYRCRIFFPRTVTKLYHLRVLDFGEYGMLERSCSPENMSNLVNLQRVVGRSLGDFPNIGKLTLLRTLPTFRVKRDLLGYDIKQLKHLNKLQGKLVISGLQHVRSEEEAVEAKLAEKEHLKQLTLAWDDDNPSSNHDAAVLECLCPPMGLEVLEIIGYRGSYPGWMVGKHSAQLYLQKLELRQCSPLGPAPRLFECFLHLESLCLSHLSWHTLPDNMEQVRTLKVLMISHCKNMKTRHHGAMALHQQGFRHQWEDDEGNVEQGGSSDLKPNCRLGRMYMCYDSLVYFHSVLFFIKN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.1231015 | 3.3629675 | 0.4263225 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0325300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g25900 | SBH | 0.0 | 0.0 | 0.131367 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0325300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0008210 | SBH | 0.0 | 5.078377 | 1.504313 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0008830 | SBH | 0.0 | 0.000000 | 0.381815 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0008040 | SBH | 0.0 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0008280 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007910 | RBH | 0.0 | 6.857666 | 2.178943 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0242500 | RBH | 0.0561555 | 3.2701215 | 0.083372 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0007580 | SBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0230400 | RBH | 0.154252 | 3.424528 | 0.2335185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0008020 | SBH | 0.0 | 0.097886 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007700 | RBH | 0.0 | 4.539910 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007730 | SBH | 0.0 | 3.601985 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0007660 | RBH | 0.0 | 1.220624 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0008540 | SBH | 0.0 | 2.071673 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G007670 | RBH | 0.0 | 1.786869 | 0.590157 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0007770 | RBH | 0.0 | 12.553306 | 0.551740 |
