Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_04G0094500 OGI:04020560 | 13/16 Minghui 63 | MH63RS3 | HZAU Chr04:5992664-5996339
Gene Symbol LR10, OsLR10
DNA seq

ATGGCAGAAAATTTAGTGAGCGCATCTACTGGAGCAATGAATTCTCTTCTCAAGAAATTGGCCGCTATGCTACGCTATGAATACAAGCTGCACAAGGATGTGTATGAAGACATAGAGTTTATGAAAGATGAGCTTGAGGCCATGCGAGCGTTCCTGTTGAAAATGTCAGAGGTTGAGGATCCAGACGTGCAAGCCAAGCTCCGGATCAGGGCTGTGCGAGAGCTATCGTATGATATCGAGGACTACATCGACAAGTCCATGGTCCTAATCGATCATGAACCTTCTTCCAGGACTCGTGGCTTTAAGGAGTTTATCGACAAGAGCAAGAATTTGTTGACAAAACTCAAGACTCAACATCAAATTGCCAAGGACATAAAGGTCATTAAGAAGCAAGTCATAGAGGTAAGTGAGAGGTTCACAAGGTACAAGGTTGATGAAGGAACTTCGAAGCTGCAAAATTCGACCATTGACCCACGAGTATGCACAATATATAAAGATGCATCTGACCTTGTTGGCATTCATGAGCCTGTAGAAGACATCATCAAGTGCTTCACATATGAGGATGAATTGGCAAAAGATCTGAAAGTTGTCTCCATAGTTGGATTCGGAGGACTAGGCGAAACGACTCTTGCCAACCAAGTGTACCGCAAACTTGCTGCCAAGTTTGAGTGTCGAGCTTTTGTGTCAATTTCTCGGAATCCTGATATAAGAAGCATTTTGAAATCTTTGTTATCCCAACTCTGCAATCAAGAATATGTCCAGACCGACGCATGGGATGAGAATCAAATTATTAGCACGCTTCTTGAAAAGAAAAGGTATGTGAGTAAATCCTTTCATGCTTTATTTTCAAGCTGTATTATTCTAATTAAAAGTCTCTTTTTATTCTTGTGTGGCATTGATGTTTCCTTTGCTTCAAGATAGTTCATGTGTAGTCCTTTGGTGGCTTAGTGCCCTGTTTTGAATGTGTAGCAGATGTGTTTCTAGGTGGTGTTGCCAGGTGAAACCCTAGAATTCCTGTAGTCCTGTTATATTTCTTTATAATAAAGCTGGCTCAAAAGGTTTCTGATCTTAAAGAAAGTGGTTTCTCTTTGTGTTTTTCAAAACATAGCATGACATATGCACATTTTGGACTCTTTTCGCACAGGCGATTCTGTAAAGCACTCAAGAGGGAGTTTACAGCAAGAATCTAAACCAAATTCCAAACAAACTTTCTCATCCTAACAGGTGCTGAAACTTTCAAGGGGTCACCCTAGGTGTTTTCCATTGGAGATTTGATCCGGTCCAACAAAAAGTACCTTGAGGTACTGGTACCTCACGGAATCGTTTCCGATCGTTGAATCTAACAATGCTCATCCTGCTCAGCTAGATCCAACGATCGGAAATGATCTGGTACCGTGAGGTACCGGTATCTCAAGATACTTTTTGCTAGACTGGAGCATATCTCTTCTTGTGGACATGTAGAGTATCCCTATTCGTCTAATTAATGTTATTTATAAAAAGATTTGCTCCATTCCAGCAAAAATTATCTCGAGGTTCCGGTACCTCACGGTACTAAATCGTTTCCGATCATTGGATCTAGCTAGGCAGGATGGGCATTATTAGATCCAACGACCGAAAACGATTTAGTACCGTGAGGTACCAATACCTCGAGATACTTTTTGCACGACCGTTGCAAATCTCTATTTATAATAAGGTACAGATTTTTCGTACAATGACAGGTACATTGTAATAGTTGATGATATATGGAGCATACCAACATGGGAAATTATTGAGTGTGCTTTTCCAAAAGAAGGATTGCAAGAGTCGAATAATCACAACTACACGCAAAATCGATGTAGCGCAAAGCTGAGCTTCTCAGGGTGATCTTGTTTACAGAATGAAACCCCTTAGTAGCATTGATTCTAAAAGGTTATTCTTGAAAAGAATATTTGACTCTGAGGAAAATTGCCCTTCTCACCTTGTCGAAGCTTCGAATGCAATATTGAGGAAATGTGGTGGTTTGCCATTGGTAATCATTACCACATCTAGCCTGTTGGCTAACAAGAACAAAACAGATCAATGGGATCGGATACAAAGATCCATTGGTTATGCACTTGCAGAGAATTCAGATTTTAAGGCATAAGATATTATCTCTCAGCTATTTCGACCTACCTCAACATCTCAGAACTTGCTTCTTGTTTCTGACTATATTCCCAGAAGATTTTAGGATTCCTCGAATGCATTTGATAGATAGATGGATAGCTGAAGGATTCATTCAAGGAGATAGTCGACAAAACCTATATAAATTGGGAAATTCTTATTTCTATGAACTTATTAACAGAAGCTTAGTCCAGCCATTGGAAATACGCATTGATGACCAAGCGCGGAGTTGTCGAGTCCATGACACCATCCACGATTTCCTCTTGTCCAAGTCTATTGAAGAGAACTTTGCTGCTACAATCAACTATCCACAGCTTACATGTTTGTCAACTCCAGATATGAAGGTTCGTCGACTATCTCTGATACAGGGACACGAGCAATCAGACATAATTATTTCTCCAAGCTGGAATTTATCGCAGCTTAGATCCCTACTATTTTTTGGGGTGCAAAGCAACTACCCACTTTCTCCAACTTCAGCACCTTGCGTGTGCTGGACTTGTGGTTTTGTGCTGAATGTGGATTAGAAAACCATCATCTTGAGACTGTGACAAGACTTTCTCAGTTGAGGTACCTGACAATCCAAGGGAAGAAGATAACTGAACTTCCAAGAAAATTTGGAGATCTCAAATGTCTAGAGGTGCTAGATGCCATAGCTACATCGGTAAAAGAACTGCCTAAATCTACTACTCAGCTGCAGCGATTAGCTGTTCTGTATGTCAATGATGGAACAAAGTTGCCTGATCAATTCAAAAATATGCAAATGTTAGAAGAGGTAGTAGGCATAGATGTATTCAGACACTCGATGGAATTTCTGGAGGGACTGTGTGAGCTGAAAAACCTGTGGAGGTTGAGCATAAATTGGGATATTGACAGGCTAGAAGGTAATAAAGTGAGATACAAGGAAATAATAGCATCTTCTCTCTGCAAACTAGAAGCCTGCAATCTCCATGATCTGAGCATTCATGTTCACTTGAGAAACAACGATGATTTCTCTTCCTTGTTACTACCTCTAAATAGCATTAAAAGTTTTGTACTCAGAGGAGAAAGCATTTCCAAGGTTAACATATGGCTGAGCTCCCTTGTGAGCATCCGGCGATTGGCTCTTACTATTAAGGACATAGATCAAGATGATCTTCAGGTCCTTGGAAGTATACCCAGTTTGACAAATTTGTACCTATGTTTAGACCCAGACCAAAATGAAAGATCTATTGCCATCAGCGACATCCATGGATTCCAACAGTTGGAGCCTTTCACTTTCCAATCTACGCATACGGGTCTGATGTTTGAAGCTGGATCTATGGCAAGGCTTGGACAACTTTCGTTTGGAATCAATGTAGCTAATTTCAAGTCAACATATGGTGGTTTTTGTCTAGGCATCCAGCACCTGTCCTGCCTCACTATGGTCGGTGTCAGTACAAATCGTTTGGGTGCAAAGCTTGGAGATGTGGAAGCCGTAGAGGATGCTTTCAGGTGCATGGTAGAAGCACATCCAAACCAGCCCACTCTAGAAATTGAAACTGACAATTTACGTGAATGA

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CDS seq

ATGGCAGAAAATTTAGTGAGCGCATCTACTGGAGCAATGAATTCTCTTCTCAAGAAATTGGCCGCTATGCTACGCTATGAATACAAGCTGCACAAGGATGTGTATGAAGACATAGAGTTTATGAAAGATGAGCTTGAGGCCATGCGAGCGTTCCTGTTGAAAATGTCAGAGGTTGAGGATCCAGACGTGCAAGCCAAGCTCCGGATCAGGGCTGTGCGAGAGCTATCGTATGATATCGAGGACTACATCGACAAGTCCATGGTCCTAATCGATCATGAACCTTCTTCCAGGACTCGTGGCTTTAAGGAGTTTATCGACAAGAGCAAGAATTTGTTGACAAAACTCAAGACTCAACATCAAATTGCCAAGGACATAAAGGTCATTAAGAAGCAAGTCATAGAGGTAAGTGAGAGGTTCACAAGGTACAAGGTTGATGAAGGAACTTCGAAGCTGCAAAATTCGACCATTGACCCACGAGTATGCACAATATATAAAGATGCATCTGACCTTGTTGGCATTCATGAGCCTGTAGAAGACATCATCAAGTGCTTCACATATGAGGATGAATTGGCAAAAGATCTGAAAGTTGTCTCCATAGTTGGATTCGGAGGACTAGGCGAAACGACTCTTGCCAACCAAGTGTACCGCAAACTTGCTGCCAAGTTTGAGTGTCGAGCTTTTGTGTCAATTTCTCGGAATCCTGATATAAGAAGCATTTTGAAATCTTTGTTATCCCAACTCTGCAATCAAGAATATGTCCAGACCGACGCATGGGATGAGAATCAAATTATTAGCACGCTTCTTGAAAAGAAAAGAATATTTGACTCTGAGGAAAATTGCCCTTCTCACCTTGTCGAAGCTTCGAATGCAATATTGAGGAAATGTGGTGGTTTGCCATTGGTAATCATTACCACATCTAGCCTGTTGGCTAACAAGAACAAAACAGATCAATGGGATCGGATACAAAGATCCATTGAAGATTTTAGGATTCCTCGAATGCATTTGATAGATAGATGGATAGCTGAAGGATTCATTCAAGGAGATAGTCGACAAAACCTATATAAATTGGGAAATTCTTATTTCTATGAACTTATTAACAGAAGCTTAGTCCAGCCATTGGAAATACGCATTGATGACCAAGCGCGGAGTTGTCGAGTCCATGACACCATCCACGATTTCCTCTTGTCCAAGTCTATTGAAGAGAACTTTGCTGCTACAATCAACTATCCACAGCTTACATGTTTGTCAACTCCAGATATGAAGCAACTACCCACTTTCTCCAACTTCAGCACCTTGCGTGTGCTGGACTTGTGGTTTTGTGCTGAATGTGGATTAGAAAACCATCATCTTGAGACTGTGACAAGACTTTCTCAGTTGAGGTACCTGACAATCCAAGGGAAGAAGATAACTGAACTTCCAAGAAAATTTGGAGATCTCAAATGTCTAGAGGTGCTAGATGCCATAGCTACATCGGTAAAAGAACTGCCTAAATCTACTACTCAGCTGCAGCGATTAGCTGTTCTGTATGTCAATGATGGAACAAAGTTGCCTGATCAATTCAAAAATATGCAAATGTTAGAAGAGGTAGTAGGCATAGATGTATTCAGACACTCGATGGAATTTCTGGAGGGACTGTGTGAGCTGAAAAACCTGTGGAGGTTGAGCATAAATTGGGATATTGACAGGCTAGAAGGTAATAAAGTGAGATACAAGGAAATAATAGCATCTTCTCTCTGCAAACTAGAAGCCTGCAATCTCCATGATCTGAGCATTCATGTTCACTTGAGAAACAACGATGATTTCTCTTCCTTGTTACTACCTCTAAATAGCATTAAAAGTTTTGTACTCAGAGGAGAAAGCATTTCCAAGGTTAACATATGGCTGAGCTCCCTTGTGAGCATCCGGCGATTGGCTCTTACTATTAAGGACATAGATCAAGATGATCTTCAGGTCCTTGGAAGTATACCCAGTTTGACAAATTTGTACCTATGTTTAGACCCAGACCAAAATGAAAGATCTATTGCCATCAGCGACATCCATGGATTCCAACAGTTGGAGCCTTTCACTTTCCAATCTACGCATACGGGTCTGATGTTTGAAGCTGGATCTATGGCAAGGCTTGGACAACTTTCGTTTGGAATCAATGTAGCTAATTTCAAGTCAACATATGGTGGTTTTTGTCTAGGCATCCAGCACCTGTCCTGCCTCACTATGGTCGGTGTCAGTACAAATCGTTTGGGTGCAAAGCTTGGAGATGTGGAAGCCGTAGAGGATGCTTTCAGGTGCATGGTAGAAGCACATCCAAACCAGCCCACTCTAGAAATTGAAACTGACAATTTACGTGAATGA

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Protein seq

MAENLVSASTGAMNSLLKKLAAMLRYEYKLHKDVYEDIEFMKDELEAMRAFLLKMSEVEDPDVQAKLRIRAVRELSYDIEDYIDKSMVLIDHEPSSRTRGFKEFIDKSKNLLTKLKTQHQIAKDIKVIKKQVIEVSERFTRYKVDEGTSKLQNSTIDPRVCTIYKDASDLVGIHEPVEDIIKCFTYEDELAKDLKVVSIVGFGGLGETTLANQVYRKLAAKFECRAFVSISRNPDIRSILKSLLSQLCNQEYVQTDAWDENQIISTLLEKKRIFDSEENCPSHLVEASNAILRKCGGLPLVIITTSSLLANKNKTDQWDRIQRSIEDFRIPRMHLIDRWIAEGFIQGDSRQNLYKLGNSYFYELINRSLVQPLEIRIDDQARSCRVHDTIHDFLLSKSIEENFAATINYPQLTCLSTPDMKQLPTFSNFSTLRVLDLWFCAECGLENHHLETVTRLSQLRYLTIQGKKITELPRKFGDLKCLEVLDAIATSVKELPKSTTQLQRLAVLYVNDGTKLPDQFKNMQMLEEVVGIDVFRHSMEFLEGLCELKNLWRLSINWDIDRLEGNKVRYKEIIASSLCKLEACNLHDLSIHVHLRNNDDFSSLLLPLNSIKSFVLRGESISKVNIWLSSLVSIRRLALTIKDIDQDDLQVLGSIPSLTNLYLCLDPDQNERSIAISDIHGFQQLEPFTFQSTHTGLMFEAGSMARLGQLSFGINVANFKSTYGGFCLGIQHLSCLTMVGVSTNRLGAKLGDVEAVEDAFRCMVEAHPNQPTLEIETDNLRE

Function Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_04G0094500 OsMH63_04T0094500.1 Chr04 5992664 5996339 + maker
CDS seq

ATGGCAGAAAATTTAGTGAGCGCATCTACTGGAGCAATGAATTCTCTTCTCAAGAAATTGGCCGCTATGCTACGCTATGAATACAAGCTGCACAAGGATGTGTATGAAGACATAGAGTTTATGAAAGATGAGCTTGAGGCCATGCGAGCGTTCCTGTTGAAAATGTCAGAGGTTGAGGATCCAGACGTGCAAGCCAAGCTCCGGATCAGGGCTGTGCGAGAGCTATCGTATGATATCGAGGACTACATCGACAAGTCCATGGTCCTAATCGATCATGAACCTTCTTCCAGGACTCGTGGCTTTAAGGAGTTTATCGACAAGAGCAAGAATTTGTTGACAAAACTCAAGACTCAACATCAAATTGCCAAGGACATAAAGGTCATTAAGAAGCAAGTCATAGAGGTAAGTGAGAGGTTCACAAGGTACAAGGTTGATGAAGGAACTTCGAAGCTGCAAAATTCGACCATTGACCCACGAGTATGCACAATATATAAAGATGCATCTGACCTTGTTGGCATTCATGAGCCTGTAGAAGACATCATCAAGTGCTTCACATATGAGGATGAATTGGCAAAAGATCTGAAAGTTGTCTCCATAGTTGGATTCGGAGGACTAGGCGAAACGACTCTTGCCAACCAAGTGTACCGCAAACTTGCTGCCAAGTTTGAGTGTCGAGCTTTTGTGTCAATTTCTCGGAATCCTGATATAAGAAGCATTTTGAAATCTTTGTTATCCCAACTCTGCAATCAAGAATATGTCCAGACCGACGCATGGGATGAGAATCAAATTATTAGCACGCTTCTTGAAAAGAAAAGAATATTTGACTCTGAGGAAAATTGCCCTTCTCACCTTGTCGAAGCTTCGAATGCAATATTGAGGAAATGTGGTGGTTTGCCATTGGTAATCATTACCACATCTAGCCTGTTGGCTAACAAGAACAAAACAGATCAATGGGATCGGATACAAAGATCCATTGAAGATTTTAGGATTCCTCGAATGCATTTGATAGATAGATGGATAGCTGAAGGATTCATTCAAGGAGATAGTCGACAAAACCTATATAAATTGGGAAATTCTTATTTCTATGAACTTATTAACAGAAGCTTAGTCCAGCCATTGGAAATACGCATTGATGACCAAGCGCGGAGTTGTCGAGTCCATGACACCATCCACGATTTCCTCTTGTCCAAGTCTATTGAAGAGAACTTTGCTGCTACAATCAACTATCCACAGCTTACATGTTTGTCAACTCCAGATATGAAGCAACTACCCACTTTCTCCAACTTCAGCACCTTGCGTGTGCTGGACTTGTGGTTTTGTGCTGAATGTGGATTAGAAAACCATCATCTTGAGACTGTGACAAGACTTTCTCAGTTGAGGTACCTGACAATCCAAGGGAAGAAGATAACTGAACTTCCAAGAAAATTTGGAGATCTCAAATGTCTAGAGGTGCTAGATGCCATAGCTACATCGGTAAAAGAACTGCCTAAATCTACTACTCAGCTGCAGCGATTAGCTGTTCTGTATGTCAATGATGGAACAAAGTTGCCTGATCAATTCAAAAATATGCAAATGTTAGAAGAGGTAGTAGGCATAGATGTATTCAGACACTCGATGGAATTTCTGGAGGGACTGTGTGAGCTGAAAAACCTGTGGAGGTTGAGCATAAATTGGGATATTGACAGGCTAGAAGGTAATAAAGTGAGATACAAGGAAATAATAGCATCTTCTCTCTGCAAACTAGAAGCCTGCAATCTCCATGATCTGAGCATTCATGTTCACTTGAGAAACAACGATGATTTCTCTTCCTTGTTACTACCTCTAAATAGCATTAAAAGTTTTGTACTCAGAGGAGAAAGCATTTCCAAGGTTAACATATGGCTGAGCTCCCTTGTGAGCATCCGGCGATTGGCTCTTACTATTAAGGACATAGATCAAGATGATCTTCAGGTCCTTGGAAGTATACCCAGTTTGACAAATTTGTACCTATGTTTAGACCCAGACCAAAATGAAAGATCTATTGCCATCAGCGACATCCATGGATTCCAACAGTTGGAGCCTTTCACTTTCCAATCTACGCATACGGGTCTGATGTTTGAAGCTGGATCTATGGCAAGGCTTGGACAACTTTCGTTTGGAATCAATGTAGCTAATTTCAAGTCAACATATGGTGGTTTTTGTCTAGGCATCCAGCACCTGTCCTGCCTCACTATGGTCGGTGTCAGTACAAATCGTTTGGGTGCAAAGCTTGGAGATGTGGAAGCCGTAGAGGATGCTTTCAGGTGCATGGTAGAAGCACATCCAAACCAGCCCACTCTAGAAATTGAAACTGACAATTTACGTGAATGA

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Protein seq

MAENLVSASTGAMNSLLKKLAAMLRYEYKLHKDVYEDIEFMKDELEAMRAFLLKMSEVEDPDVQAKLRIRAVRELSYDIEDYIDKSMVLIDHEPSSRTRGFKEFIDKSKNLLTKLKTQHQIAKDIKVIKKQVIEVSERFTRYKVDEGTSKLQNSTIDPRVCTIYKDASDLVGIHEPVEDIIKCFTYEDELAKDLKVVSIVGFGGLGETTLANQVYRKLAAKFECRAFVSISRNPDIRSILKSLLSQLCNQEYVQTDAWDENQIISTLLEKKRIFDSEENCPSHLVEASNAILRKCGGLPLVIITTSSLLANKNKTDQWDRIQRSIEDFRIPRMHLIDRWIAEGFIQGDSRQNLYKLGNSYFYELINRSLVQPLEIRIDDQARSCRVHDTIHDFLLSKSIEENFAATINYPQLTCLSTPDMKQLPTFSNFSTLRVLDLWFCAECGLENHHLETVTRLSQLRYLTIQGKKITELPRKFGDLKCLEVLDAIATSVKELPKSTTQLQRLAVLYVNDGTKLPDQFKNMQMLEEVVGIDVFRHSMEFLEGLCELKNLWRLSINWDIDRLEGNKVRYKEIIASSLCKLEACNLHDLSIHVHLRNNDDFSSLLLPLNSIKSFVLRGESISKVNIWLSSLVSIRRLALTIKDIDQDDLQVLGSIPSLTNLYLCLDPDQNERSIAISDIHGFQQLEPFTFQSTHTGLMFEAGSMARLGQLSFGINVANFKSTYGGFCLGIQHLSCLTMVGVSTNRLGAKLGDVEAVEDAFRCMVEAHPNQPTLEIETDNLRE

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.1314955 0.754916 0.1404075

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0193950 RBH 0.097075 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g11760 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os04g0193950 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0003730 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0004250 RBH 0.0 0.224728 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0003770 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0003860 RBH 0.000000 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0003740 RBH 0.0 0.0 0.000000
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0003870 RBH 0.000000 0.0 0.051675
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0098000 RBH 0.293805 0.607371 0.3278405
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0003700 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0003930 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0003740 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0003630 RBH 0.091432 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0003800 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G003990 RBH 0.167195 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0003740 RBH 0.0 1.885095 0.748608
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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