Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0033300 | OGI:04006130 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:2099500-2104299 | ||||||||
| Gene Symbol | CTB4A, OsRLCK127, RLCK127, OsCTB4a, qCTB4-1 | ||||||||||
| DNA seq | GAAGCAAAACTTTGTTAAATTGTGTTGGGGAGAAGCCCAATGCATTGAAGCAAGCACCCACATTTCACCATGACACCACCACCACCACCATCCATCTGGAGCAAGCAACCAAGCACCAAGACACAAGCAAACAGCTCAACCTGTTGAGTGTTTTGAGGAGGAAAAGAGAGAGAGAGTAGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAAGGTGTTTGTTTTCACTCTTGAACCATGGTGAGTGAGTGAAGAGTGAGAGTGAAGTTCATAGAGATCATCACCTCTCTTGAACCAAGCAAGCTTGGTTAGCATAGTGTATTGTGCACTGCCCCAAGCAAGCACAGCACGATTTTTGATGCAGCTGCCATTGCCACCATTGTTGCCAAGCCCCATGCACTTCCTTCTCCTCCTCTTACTCCACCTCCTCTCCTTCTCCTCCTCCACCGCCGCCTCGGCTTCATCGGAGGTCGCCTTCCTGACGCAATGGCTCAACACCACGGCGGCGCGGCCGCCGGACTGGTCGCCGTCGGCGTCGTCGCCGTGCAAGTGGTCGCACGTCGGCTGCGACGCCGCCACGGGGAGCGTCACCTCCGTCACGTTCCAGTCGGTGCACCTCGCCGCGCCGCTCCCCCCCGGCATCTGCCCCGCGCTCCCGTCGCTCGCGTCGCTCGTCGTCTCCGACGCCAACCTCACCGGCGGCGTCCCCGACGACCTCCACCTGTGCCGCCGCCTCGCCGTGCTCGACCTCAGCGGCAACTCGCTCTCCGGCCCCATCCCGGCCTCGCTCGGGAACGCGACGGCCATGGCGTCGCTGGCGCTCAACTCCAACCAGCTCTCGGGCCCAATCCCGGCGTCGCTCGGCAACCTCGCCGCGTCGCTCAGGGACCTCCTGCTCTTCGACAACCGCCTCTCCGGCGAGCTCCCGGCGTCGCTCGGCGAGCTGCGGCTGCTCGAGTCGCTGCGCGCCGGCGGCAACCGTGACCTCGGCGGCGAGATCCCGGAGTCGTTCTCGAGGCTCTCCAACCTCGTCGTGCTCGGCCTCGCCGACACCAAGATCTCCGGCGCGCTCCCGGCGTCGCTGGGGCGGCTCCAGAGCTTGCAGACGCTGTCCATCTACACGACGATGCTGTCCGGCTCCATCCCGGCGGAGCTCGCCGGCTGCGGCAACCTCACCAACGTCTACCTCTACGAGAACTCGCTCTCCGGCCCGCTCCCGCCGTCGCTGGGCGCGCTGCCGCGGCTGCAGAAGCTGCTGCTATGGCAGAACTCGCTGACGGGGCCCATCCCGGACACCTTCGGCAACCTCACCTCCCTCGTCTCCCTCGACCTCTCCATCAACGCCATCTCCGGCGCCATCCCGGCGTCGCTCGGCCGCCTCCCGGCGCTGCAGGACCTCATGCTCAGCGACAACAACCTCACGGGGACCATCCCGCCGGCGCTGGCGAACGCGACGTCGCTCGTCCAGCTCCAGCTCGACACCAACGCCATCTCCGGCCTCATCCCGCCGGAGCTCGGCCGCCTCGCCGCGCTGCAGGTGGTGTTCGCGTGGCAGAACCAGCTCGAGGGCTCCATCCCGGCGTCGCTCGCCGGCCTCGCCAACCTCCAGGCGCTCGACCTCTCGCACAACCACCTCACCGGCGCCATTCCCCCCGGGATCTTCTTGCTCCGCAACCTCACCAAGCTGCTCCTCCTCTCCAACGACCTCTCCGGCGTCATCCCGCCGGAGATCGGCAAGGCGGCGAGCCTCGTGCGGCTGCGGCTAGGAGGAAACCGGCTCGCCGGGACGATCCCGGCGGCGGTGGCCGGGATGAGGAGCATCAACTTCCTCGACCTCGGCAGCAACCGCCTCGCCGGCGGCGTCCCCGCCGAGCTCGGCAACTGCTCGCAGCTCCAGATGCTCGACCTCAGCAACAACACGCTCACCGGCGCGCTGCCGGAGTCGCTCGCCGGCGTCCGCGGCCTGCAGGAGATCGACGTGTCACACAACCAGCTCACCGGCGGCGTCCCCGACGCGTTCGGGAGGCTGGAGGCGCTCAGCCGCCTCGTCCTCAGCGGCAACTCGCTCTCCGGCGCCATCCCGGCGGCGCTGGGAAAGTGCCGCAACCTCGAGCTCCTCGACCTCAGCGACAACGCCCTCTCCGGCCGCATCCCCGACGAACTGTGCGCCATTGATGGCCTCGACATCGCGCTCAACCTCAGCCGGAACGGGCTCACCGGGCCGATCCCGGCGAGGATCTCGGCGCTGAGCAAGCTCTCGGTGCTCGACCTGTCGTACAACGCGCTCGACGGCGGCCTCGCGCCGCTCGCCGGCCTCGACAACCTCGTCACGCTCAACGTGTCCAACAACAACTTCACCGGCTACCTCCCGGACACGAAGCTGTTCCGGCAGCTGTCGACGTCGTGCCTCGCCGGCAACTCCGGGCTCTGCACCAAGGGCGGCGACGTGTGCTTCGTCAGCATCGACGCCAGCGGGAGGCCGGTGATGAGCGCCGACGAGGAGGAGGTGCAGCGGATGCACCGGCTCAAGCTCGCCATCGCGCTGCTGGTGACGGCGACGGTGGCGATGGTGCTGGGCATGGTCGGGATCCTCCGGGCGCGCGGGATGGGCATCGTCGGCGGGAAGGGCGGGCACGGCGGCGGGAGCAGCGACTCGGAGTCCGGCGGCGACCTGGCGTGGCCGTGGCAGTTCACGCCGTTCCAGAAGCTGAGCTTCAGCGTCGAGCAGGTGGTGCGCAACCTCGTCGACGCCAACATCATCGGCAAGGGCTGCTCCGGCGTGGTGTACCGCGTCGGCCTCGACACCGGCGAGGTCATCGCCGTCAAGAAGCTCTGGCCAAGCACCCGCAACGGCGCCGACAAGGACGACGTCGCCGGCGGCGGGCGCGTCCGCGACTCGTTCTCGGCGGAGGTGAGGACGCTGGGGTGCATCCGGCACAAGAACATCGTGAGGTTCCTCGGCTGCTGCTGGAACAAGACGACACGGCTGCTCATGTACGACTACATGGCGAACGGTAGCCTGGGTGCTGTGCTCCACGAGCGCCGCCATGGCGGCCATGGCGGCGGCGGCGCGCAGCTGGAGTGGGATGTGAGGTACAGGATCGTGCTCGGTGCGGCGCAGGGGCTCGCGTACCTGCACCACGACTGCGTGCCGCCGATCGTGCACCGCGACATCAAGGCCAACAACATCCTCATCGGGCTCGACTTCGAGGCCTACATCGCCGACTTCGGCCTCGCCAAGCTCGTCGACGACGGCGACTTTGGCCGCTCGTCCAACACCGTCGCCGGATCATATGGCTACATCGCCCCAGGTAAGTTTTTTCTTTAAGATAATGGAAGCTTTATTGAAACTTATTCAATTACATCAAGATGATACAACCAATTGAGCCCACTCCGCGTAAAATTCACGCAACCAAAAAGGACAAACCACCCATCTTAAGCACAAATGTTGAACAGAATCATATAGTTCAGTGGCTTTCAATACTATGTCACAAAAGTTACTTCAATCTTTCACCTTCTGATTAACAAACAATCTGAACTGAAAATGGTTCAATCTTTGATCTTCTGATTAGCAATGTTAACTGAAAATGGCGTCTTAATTAAAGCTTCAGTACATGATCTTTTCATTAGCAATCTGAACCAAAAAAAAATCGTTTCTTCATCAGAGCTTAAATCTTTCACCTTCTGATTAACAACAATCTGAACTAAAATTGTCTCTTCATTAAAGCTTCAATCTTGGATCATCTGATCAACAATCTGAACCAAAAAAGAAGAAAAAATCTTGATTAAATCTCCAACCTTCGATCTTCTGATGAACATTCTGAAAAACAAATTTCTTGATTCAATTTGATGAACAAAAATGTCTTGGATAATCTCATCAACAATCCGAACAAAAAAGAAAAACGAATTCCTGATCAAACCTGATGAGCAAAAAAAAAATGTGTTTCCAAAAAAAACATTGCAGAGTACGGGTACATGATGAAGATAACGGAGAAAAGCGACGTGTACAGCTACGGGGTGGTGGTGCTGGAGGTGCTCACCGGGAAGCAGCCCATCGACCCCACCATCCCCGACGGCCAGCACGTCGTCGACTGGGTCCGCCGCCGGAAGGGCGCCACCGACGTGCTCGACCCGGCGCTGCGCGGCCGCTCCGACGCCGAGGTCGACGAGATGCTGCAGGTCATGGGCGTCGCCCTCCTCTGCGTCGCCCCTTCCCCCGACGACCGCCCCGCCATGAAGGACGTCGCCGCCATGCTCAACGAGATCCGCCTCGACCGCGACGACTACGCCAACGTCGACCTCCTCCTCAAGTCCGGCGCCGCCGCCGCCTCGCCGCCTCGCGCCGCCGCCGCCGCCACGTCGACGTCGTCGAGCACGCCGCCGAGCAGCAGCAGCTTCTCCGGCTCATCCGCCATGATCTACAACTCATCATCCAAGGCCAAGTCGCCATTCGATTGAAACCACCATATAACTCTGAACAGAAAACATAAGAAAAATGTTTGTGCCTTCTTGGGCTTGTTTGATGATCTTACATGTGTTTGTGGTGGAGAATTTGATGCGAGTTTGTTGTGAATTTGTGATGGTAGGTGGTGAGCTGTGTAAATGAATGGGGGGAAGAGGAGGAGAAGGATAGGCTGTTTGAATTCGTTTCTTTTTGTTTTGTTTTTGGAGAGTAGAAGTAGATGGAGCTGAGGAATTAGGAAGAACTAGAACCTGCAGAAGCAAAAAGCTTGATGGCTTTGTTTTGTTAGTGTTCAGTGTATGCCTGTTGAATAAAGATCCAAGATTACCTTACA
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| CDS seq | ATGCAGCTGCCATTGCCACCATTGTTGCCAAGCCCCATGCACTTCCTTCTCCTCCTCTTACTCCACCTCCTCTCCTTCTCCTCCTCCACCGCCGCCTCGGCTTCATCGGAGGTCGCCTTCCTGACGCAATGGCTCAACACCACGGCGGCGCGGCCGCCGGACTGGTCGCCGTCGGCGTCGTCGCCGTGCAAGTGGTCGCACGTCGGCTGCGACGCCGCCACGGGGAGCGTCACCTCCGTCACGTTCCAGTCGGTGCACCTCGCCGCGCCGCTCCCCCCCGGCATCTGCCCCGCGCTCCCGTCGCTCGCGTCGCTCGTCGTCTCCGACGCCAACCTCACCGGCGGCGTCCCCGACGACCTCCACCTGTGCCGCCGCCTCGCCGTGCTCGACCTCAGCGGCAACTCGCTCTCCGGCCCCATCCCGGCCTCGCTCGGGAACGCGACGGCCATGGCGTCGCTGGCGCTCAACTCCAACCAGCTCTCGGGCCCAATCCCGGCGTCGCTCGGCAACCTCGCCGCGTCGCTCAGGGACCTCCTGCTCTTCGACAACCGCCTCTCCGGCGAGCTCCCGGCGTCGCTCGGCGAGCTGCGGCTGCTCGAGTCGCTGCGCGCCGGCGGCAACCGTGACCTCGGCGGCGAGATCCCGGAGTCGTTCTCGAGGCTCTCCAACCTCGTCGTGCTCGGCCTCGCCGACACCAAGATCTCCGGCGCGCTCCCGGCGTCGCTGGGGCGGCTCCAGAGCTTGCAGACGCTGTCCATCTACACGACGATGCTGTCCGGCTCCATCCCGGCGGAGCTCGCCGGCTGCGGCAACCTCACCAACGTCTACCTCTACGAGAACTCGCTCTCCGGCCCGCTCCCGCCGTCGCTGGGCGCGCTGCCGCGGCTGCAGAAGCTGCTGCTATGGCAGAACTCGCTGACGGGGCCCATCCCGGACACCTTCGGCAACCTCACCTCCCTCGTCTCCCTCGACCTCTCCATCAACGCCATCTCCGGCGCCATCCCGGCGTCGCTCGGCCGCCTCCCGGCGCTGCAGGACCTCATGCTCAGCGACAACAACCTCACGGGGACCATCCCGCCGGCGCTGGCGAACGCGACGTCGCTCGTCCAGCTCCAGCTCGACACCAACGCCATCTCCGGCCTCATCCCGCCGGAGCTCGGCCGCCTCGCCGCGCTGCAGGTGGTGTTCGCGTGGCAGAACCAGCTCGAGGGCTCCATCCCGGCGTCGCTCGCCGGCCTCGCCAACCTCCAGGCGCTCGACCTCTCGCACAACCACCTCACCGGCGCCATTCCCCCCGGGATCTTCTTGCTCCGCAACCTCACCAAGCTGCTCCTCCTCTCCAACGACCTCTCCGGCGTCATCCCGCCGGAGATCGGCAAGGCGGCGAGCCTCGTGCGGCTGCGGCTAGGAGGAAACCGGCTCGCCGGGACGATCCCGGCGGCGGTGGCCGGGATGAGGAGCATCAACTTCCTCGACCTCGGCAGCAACCGCCTCGCCGGCGGCGTCCCCGCCGAGCTCGGCAACTGCTCGCAGCTCCAGATGCTCGACCTCAGCAACAACACGCTCACCGGCGCGCTGCCGGAGTCGCTCGCCGGCGTCCGCGGCCTGCAGGAGATCGACGTGTCACACAACCAGCTCACCGGCGGCGTCCCCGACGCGTTCGGGAGGCTGGAGGCGCTCAGCCGCCTCGTCCTCAGCGGCAACTCGCTCTCCGGCGCCATCCCGGCGGCGCTGGGAAAGTGCCGCAACCTCGAGCTCCTCGACCTCAGCGACAACGCCCTCTCCGGCCGCATCCCCGACGAACTGTGCGCCATTGATGGCCTCGACATCGCGCTCAACCTCAGCCGGAACGGGCTCACCGGGCCGATCCCGGCGAGGATCTCGGCGCTGAGCAAGCTCTCGGTGCTCGACCTGTCGTACAACGCGCTCGACGGCGGCCTCGCGCCGCTCGCCGGCCTCGACAACCTCGTCACGCTCAACGTGTCCAACAACAACTTCACCGGCTACCTCCCGGACACGAAGCTGTTCCGGCAGCTGTCGACGTCGTGCCTCGCCGGCAACTCCGGGCTCTGCACCAAGGGCGGCGACGTGTGCTTCGTCAGCATCGACGCCAGCGGGAGGCCGGTGATGAGCGCCGACGAGGAGGAGGTGCAGCGGATGCACCGGCTCAAGCTCGCCATCGCGCTGCTGGTGACGGCGACGGTGGCGATGGTGCTGGGCATGGTCGGGATCCTCCGGGCGCGCGGGATGGGCATCGTCGGCGGGAAGGGCGGGCACGGCGGCGGGAGCAGCGACTCGGAGTCCGGCGGCGACCTGGCGTGGCCGTGGCAGTTCACGCCGTTCCAGAAGCTGAGCTTCAGCGTCGAGCAGGTGGTGCGCAACCTCGTCGACGCCAACATCATCGGCAAGGGCTGCTCCGGCGTGGTGTACCGCGTCGGCCTCGACACCGGCGAGGTCATCGCCGTCAAGAAGCTCTGGCCAAGCACCCGCAACGGCGCCGACAAGGACGACGTCGCCGGCGGCGGGCGCGTCCGCGACTCGTTCTCGGCGGAGGTGAGGACGCTGGGGTGCATCCGGCACAAGAACATCGTGAGGTTCCTCGGCTGCTGCTGGAACAAGACGACACGGCTGCTCATGTACGACTACATGGCGAACGGTAGCCTGGGTGCTGTGCTCCACGAGCGCCGCCATGGCGGCCATGGCGGCGGCGGCGCGCAGCTGGAGTGGGATGTGAGGTACAGGATCGTGCTCGGTGCGGCGCAGGGGCTCGCGTACCTGCACCACGACTGCGTGCCGCCGATCGTGCACCGCGACATCAAGGCCAACAACATCCTCATCGGGCTCGACTTCGAGGCCTACATCGCCGACTTCGGCCTCGCCAAGCTCGTCGACGACGGCGACTTTGGCCGCTCGTCCAACACCGTCGCCGGATCATATGGCTACATCGCCCCAGAGTACGGGTACATGATGAAGATAACGGAGAAAAGCGACGTGTACAGCTACGGGGTGGTGGTGCTGGAGGTGCTCACCGGGAAGCAGCCCATCGACCCCACCATCCCCGACGGCCAGCACGTCGTCGACTGGGTCCGCCGCCGGAAGGGCGCCACCGACGTGCTCGACCCGGCGCTGCGCGGCCGCTCCGACGCCGAGGTCGACGAGATGCTGCAGGTCATGGGCGTCGCCCTCCTCTGCGTCGCCCCTTCCCCCGACGACCGCCCCGCCATGAAGGACGTCGCCGCCATGCTCAACGAGATCCGCCTCGACCGCGACGACTACGCCAACGTCGACCTCCTCCTCAAGTCCGGCGCCGCCGCCGCCTCGCCGCCTCGCGCCGCCGCCGCCGCCACGTCGACGTCGTCGAGCACGCCGCCGAGCAGCAGCAGCTTCTCCGGCTCATCCGCCATGATCTACAACTCATCATCCAAGGCCAAGTCGCCATTCGATTGA
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| Protein seq | MQLPLPPLLPSPMHFLLLLLLHLLSFSSSTAASASSEVAFLTQWLNTTAARPPDWSPSASSPCKWSHVGCDAATGSVTSVTFQSVHLAAPLPPGICPALPSLASLVVSDANLTGGVPDDLHLCRRLAVLDLSGNSLSGPIPASLGNATAMASLALNSNQLSGPIPASLGNLAASLRDLLLFDNRLSGELPASLGELRLLESLRAGGNRDLGGEIPESFSRLSNLVVLGLADTKISGALPASLGRLQSLQTLSIYTTMLSGSIPAELAGCGNLTNVYLYENSLSGPLPPSLGALPRLQKLLLWQNSLTGPIPDTFGNLTSLVSLDLSINAISGAIPASLGRLPALQDLMLSDNNLTGTIPPALANATSLVQLQLDTNAISGLIPPELGRLAALQVVFAWQNQLEGSIPASLAGLANLQALDLSHNHLTGAIPPGIFLLRNLTKLLLLSNDLSGVIPPEIGKAASLVRLRLGGNRLAGTIPAAVAGMRSINFLDLGSNRLAGGVPAELGNCSQLQMLDLSNNTLTGALPESLAGVRGLQEIDVSHNQLTGGVPDAFGRLEALSRLVLSGNSLSGAIPAALGKCRNLELLDLSDNALSGRIPDELCAIDGLDIALNLSRNGLTGPIPARISALSKLSVLDLSYNALDGGLAPLAGLDNLVTLNVSNNNFTGYLPDTKLFRQLSTSCLAGNSGLCTKGGDVCFVSIDASGRPVMSADEEEVQRMHRLKLAIALLVTATVAMVLGMVGILRARGMGIVGGKGGHGGGSSDSESGGDLAWPWQFTPFQKLSFSVEQVVRNLVDANIIGKGCSGVVYRVGLDTGEVIAVKKLWPSTRNGADKDDVAGGGRVRDSFSAEVRTLGCIRHKNIVRFLGCCWNKTTRLLMYDYMANGSLGAVLHERRHGGHGGGGAQLEWDVRYRIVLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLDFEAYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGQHVVDWVRRRKGATDVLDPALRGRSDAEVDEMLQVMGVALLCVAPSPDDRPAMKDVAAMLNEIRLDRDDYANVDLLLKSGAAAASPPRAAAAATSTSSSTPPSSSSFSGSSAMIYNSSSKAKSPFD |
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| Function | LRR receptor-like serine/threonine-protein kinase RCH1 [UniProtKB/Swiss-Prot:C0LGV1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0033300 | OsMH63_04T0033300-mRNA-1 | Chr04 | 2099500 | 2104299 | + | maker | ||
| CDS seq | ATGCAGCTGCCATTGCCACCATTGTTGCCAAGCCCCATGCACTTCCTTCTCCTCCTCTTACTCCACCTCCTCTCCTTCTCCTCCTCCACCGCCGCCTCGGCTTCATCGGAGGTCGCCTTCCTGACGCAATGGCTCAACACCACGGCGGCGCGGCCGCCGGACTGGTCGCCGTCGGCGTCGTCGCCGTGCAAGTGGTCGCACGTCGGCTGCGACGCCGCCACGGGGAGCGTCACCTCCGTCACGTTCCAGTCGGTGCACCTCGCCGCGCCGCTCCCCCCCGGCATCTGCCCCGCGCTCCCGTCGCTCGCGTCGCTCGTCGTCTCCGACGCCAACCTCACCGGCGGCGTCCCCGACGACCTCCACCTGTGCCGCCGCCTCGCCGTGCTCGACCTCAGCGGCAACTCGCTCTCCGGCCCCATCCCGGCCTCGCTCGGGAACGCGACGGCCATGGCGTCGCTGGCGCTCAACTCCAACCAGCTCTCGGGCCCAATCCCGGCGTCGCTCGGCAACCTCGCCGCGTCGCTCAGGGACCTCCTGCTCTTCGACAACCGCCTCTCCGGCGAGCTCCCGGCGTCGCTCGGCGAGCTGCGGCTGCTCGAGTCGCTGCGCGCCGGCGGCAACCGTGACCTCGGCGGCGAGATCCCGGAGTCGTTCTCGAGGCTCTCCAACCTCGTCGTGCTCGGCCTCGCCGACACCAAGATCTCCGGCGCGCTCCCGGCGTCGCTGGGGCGGCTCCAGAGCTTGCAGACGCTGTCCATCTACACGACGATGCTGTCCGGCTCCATCCCGGCGGAGCTCGCCGGCTGCGGCAACCTCACCAACGTCTACCTCTACGAGAACTCGCTCTCCGGCCCGCTCCCGCCGTCGCTGGGCGCGCTGCCGCGGCTGCAGAAGCTGCTGCTATGGCAGAACTCGCTGACGGGGCCCATCCCGGACACCTTCGGCAACCTCACCTCCCTCGTCTCCCTCGACCTCTCCATCAACGCCATCTCCGGCGCCATCCCGGCGTCGCTCGGCCGCCTCCCGGCGCTGCAGGACCTCATGCTCAGCGACAACAACCTCACGGGGACCATCCCGCCGGCGCTGGCGAACGCGACGTCGCTCGTCCAGCTCCAGCTCGACACCAACGCCATCTCCGGCCTCATCCCGCCGGAGCTCGGCCGCCTCGCCGCGCTGCAGGTGGTGTTCGCGTGGCAGAACCAGCTCGAGGGCTCCATCCCGGCGTCGCTCGCCGGCCTCGCCAACCTCCAGGCGCTCGACCTCTCGCACAACCACCTCACCGGCGCCATTCCCCCCGGGATCTTCTTGCTCCGCAACCTCACCAAGCTGCTCCTCCTCTCCAACGACCTCTCCGGCGTCATCCCGCCGGAGATCGGCAAGGCGGCGAGCCTCGTGCGGCTGCGGCTAGGAGGAAACCGGCTCGCCGGGACGATCCCGGCGGCGGTGGCCGGGATGAGGAGCATCAACTTCCTCGACCTCGGCAGCAACCGCCTCGCCGGCGGCGTCCCCGCCGAGCTCGGCAACTGCTCGCAGCTCCAGATGCTCGACCTCAGCAACAACACGCTCACCGGCGCGCTGCCGGAGTCGCTCGCCGGCGTCCGCGGCCTGCAGGAGATCGACGTGTCACACAACCAGCTCACCGGCGGCGTCCCCGACGCGTTCGGGAGGCTGGAGGCGCTCAGCCGCCTCGTCCTCAGCGGCAACTCGCTCTCCGGCGCCATCCCGGCGGCGCTGGGAAAGTGCCGCAACCTCGAGCTCCTCGACCTCAGCGACAACGCCCTCTCCGGCCGCATCCCCGACGAACTGTGCGCCATTGATGGCCTCGACATCGCGCTCAACCTCAGCCGGAACGGGCTCACCGGGCCGATCCCGGCGAGGATCTCGGCGCTGAGCAAGCTCTCGGTGCTCGACCTGTCGTACAACGCGCTCGACGGCGGCCTCGCGCCGCTCGCCGGCCTCGACAACCTCGTCACGCTCAACGTGTCCAACAACAACTTCACCGGCTACCTCCCGGACACGAAGCTGTTCCGGCAGCTGTCGACGTCGTGCCTCGCCGGCAACTCCGGGCTCTGCACCAAGGGCGGCGACGTGTGCTTCGTCAGCATCGACGCCAGCGGGAGGCCGGTGATGAGCGCCGACGAGGAGGAGGTGCAGCGGATGCACCGGCTCAAGCTCGCCATCGCGCTGCTGGTGACGGCGACGGTGGCGATGGTGCTGGGCATGGTCGGGATCCTCCGGGCGCGCGGGATGGGCATCGTCGGCGGGAAGGGCGGGCACGGCGGCGGGAGCAGCGACTCGGAGTCCGGCGGCGACCTGGCGTGGCCGTGGCAGTTCACGCCGTTCCAGAAGCTGAGCTTCAGCGTCGAGCAGGTGGTGCGCAACCTCGTCGACGCCAACATCATCGGCAAGGGCTGCTCCGGCGTGGTGTACCGCGTCGGCCTCGACACCGGCGAGGTCATCGCCGTCAAGAAGCTCTGGCCAAGCACCCGCAACGGCGCCGACAAGGACGACGTCGCCGGCGGCGGGCGCGTCCGCGACTCGTTCTCGGCGGAGGTGAGGACGCTGGGGTGCATCCGGCACAAGAACATCGTGAGGTTCCTCGGCTGCTGCTGGAACAAGACGACACGGCTGCTCATGTACGACTACATGGCGAACGGTAGCCTGGGTGCTGTGCTCCACGAGCGCCGCCATGGCGGCCATGGCGGCGGCGGCGCGCAGCTGGAGTGGGATGTGAGGTACAGGATCGTGCTCGGTGCGGCGCAGGGGCTCGCGTACCTGCACCACGACTGCGTGCCGCCGATCGTGCACCGCGACATCAAGGCCAACAACATCCTCATCGGGCTCGACTTCGAGGCCTACATCGCCGACTTCGGCCTCGCCAAGCTCGTCGACGACGGCGACTTTGGCCGCTCGTCCAACACCGTCGCCGGATCATATGGCTACATCGCCCCAGAGTACGGGTACATGATGAAGATAACGGAGAAAAGCGACGTGTACAGCTACGGGGTGGTGGTGCTGGAGGTGCTCACCGGGAAGCAGCCCATCGACCCCACCATCCCCGACGGCCAGCACGTCGTCGACTGGGTCCGCCGCCGGAAGGGCGCCACCGACGTGCTCGACCCGGCGCTGCGCGGCCGCTCCGACGCCGAGGTCGACGAGATGCTGCAGGTCATGGGCGTCGCCCTCCTCTGCGTCGCCCCTTCCCCCGACGACCGCCCCGCCATGAAGGACGTCGCCGCCATGCTCAACGAGATCCGCCTCGACCGCGACGACTACGCCAACGTCGACCTCCTCCTCAAGTCCGGCGCCGCCGCCGCCTCGCCGCCTCGCGCCGCCGCCGCCGCCACGTCGACGTCGTCGAGCACGCCGCCGAGCAGCAGCAGCTTCTCCGGCTCATCCGCCATGATCTACAACTCATCATCCAAGGCCAAGTCGCCATTCGATTGA
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| Protein seq | MQLPLPPLLPSPMHFLLLLLLHLLSFSSSTAASASSEVAFLTQWLNTTAARPPDWSPSASSPCKWSHVGCDAATGSVTSVTFQSVHLAAPLPPGICPALPSLASLVVSDANLTGGVPDDLHLCRRLAVLDLSGNSLSGPIPASLGNATAMASLALNSNQLSGPIPASLGNLAASLRDLLLFDNRLSGELPASLGELRLLESLRAGGNRDLGGEIPESFSRLSNLVVLGLADTKISGALPASLGRLQSLQTLSIYTTMLSGSIPAELAGCGNLTNVYLYENSLSGPLPPSLGALPRLQKLLLWQNSLTGPIPDTFGNLTSLVSLDLSINAISGAIPASLGRLPALQDLMLSDNNLTGTIPPALANATSLVQLQLDTNAISGLIPPELGRLAALQVVFAWQNQLEGSIPASLAGLANLQALDLSHNHLTGAIPPGIFLLRNLTKLLLLSNDLSGVIPPEIGKAASLVRLRLGGNRLAGTIPAAVAGMRSINFLDLGSNRLAGGVPAELGNCSQLQMLDLSNNTLTGALPESLAGVRGLQEIDVSHNQLTGGVPDAFGRLEALSRLVLSGNSLSGAIPAALGKCRNLELLDLSDNALSGRIPDELCAIDGLDIALNLSRNGLTGPIPARISALSKLSVLDLSYNALDGGLAPLAGLDNLVTLNVSNNNFTGYLPDTKLFRQLSTSCLAGNSGLCTKGGDVCFVSIDASGRPVMSADEEEVQRMHRLKLAIALLVTATVAMVLGMVGILRARGMGIVGGKGGHGGGSSDSESGGDLAWPWQFTPFQKLSFSVEQVVRNLVDANIIGKGCSGVVYRVGLDTGEVIAVKKLWPSTRNGADKDDVAGGGRVRDSFSAEVRTLGCIRHKNIVRFLGCCWNKTTRLLMYDYMANGSLGAVLHERRHGGHGGGGAQLEWDVRYRIVLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLDFEAYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGQHVVDWVRRRKGATDVLDPALRGRSDAEVDEMLQVMGVALLCVAPSPDDRPAMKDVAAMLNEIRLDRDDYANVDLLLKSGAAAASPPRAAAAATSTSSSTPPSSSSFSGSSAMIYNSSSKAKSPFD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.112527 | 10.667723 | 0.029743 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0132500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g04330 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0132500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001320 | RBH | 0.0 | 6.085192 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0001380 | RBH | 0.0 | 5.699306 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0001350 | RBH | 0.0 | 6.099158 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0001410 | RBH | 0.0 | 0.387492 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0001360 | RBH | 0.0 | 18.225269 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0023700 | SBH | 0.271775 | 0.0014645 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0001570 | RBH | 0.000000 | 0.652476 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0029000 | RBH | 0.1529415 | 2.9499915 | 0.1194105 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001330 | RBH | 0.0 | 0.205153 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0001520 | RBH | 0.0 | 9.543659 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001460 | RBH | 0.0 | 10.141768 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0001300 | RBH | 0.0 | 0.899211 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0001470 | RBH | 0.0 | 10.464638 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G001490 | RBH | 0.377839 | 8.583616 | 0.516510 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001470 | RBH | 0.0 | 0.000000 | 0.000000 |
