Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_04G0026900 | OGI:04004240 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:1684046-1685606 | ||||||||
| Gene Symbol | OsSub33, SUB33, OsSub34, SUB34, OsSub35, SUB35 | ||||||||||
| DNA seq | ATGTTCCCCTTGTCCCCGTCGACTATGAGATCGCCTACAGCATTTTCCAGTATTGCATGTAGGTTAATTAATTACTTCTAATCATCATTTTATATTACCTTGAATAATTGCCTTTACCTTCCATACCCGTTTAAATATTTTTTTTCTTTCTTATTTGTTTACCACAGCAACAGTAAAACTGGTGTCCCAAAGGCGAAGATATCATTCAGCCGGATGACAATTGGAAGCGAAATTTCAGCCCCCAAAATAGCAGCTTTCTCATCGAGGGGTCCTAGTCCTGTCTATCCTGGGGTTCTCAAGGTAATTAAGATTGAAATTAGCTGAAGTTTTATTCATGGTGAACTTCCATATATTGAATTCCTTGCACTTAAAAATACCATATGGTATATTAACCATAACAATATTAGTGGCATGTTATCTGCATAATAAGCCGGCAAATTCTAAAACAGTTAACTTTCATTCATATAACAATTCCTACATGGATGATATGTAATCTGACTTCCCCAGATCAGAGCATGTCATAAATTTATAGAGTTGACACTAGGATATTCTGTGATCAGGACAATCTTAGACTAGCTAATATGATCAATGTTTCGATGTGTTTTTACACTTGGACACTCTTTTATTACATAGTATACATAATATATATCATGTCGTTCTCTCAAATTGGCAGCCAGACATTGCTGCACCGGGGGTTTCAATTTTAGCCGCTTCGCCAAAGACTTCCATTTCTAAAGGTGTTCCCTATAATTTCGACTCTGGAACATCTATGGCTTGCCCCCATGTAACTGGGATCATCGCCGTGCTCAGGTCCCTGCATCCTGAATGGTCACCTGCCGCCGTTAAATCTGCAATCATGACAACTGGTAAAAAAAATAATTTGCTCAAAACAAAAATCATGTTTGGTGTGTAGAAAATTTTCTGCTAATCTTGTGTTCAAAACAGGCCTTACTTGATTTGATGTGCACAAGATTAAGTTAATTCTAATCATTATATTTCTTTTCGTGCAGCACTTACTTATGATAACAATGGGATGCCGATACAAGCTAACGGAAAAACCCCAAAGATTTCCGATCCTTTCGATTATGGAGCAGGATTTGTTAATCCGAGCAAGGCAGCTGATCCTGGCCTCGTCTATGACATTGCGGCATCTGACTACCTCAAATTCTTCAACTGCATGGGAGGATTAGCCACAGGCGGAAACTGCACGACGACAAGAGGATCAATCGCTGAACTGAATCTCCCGTCCATCGCCATCCCCAACCTCACGACATTCCAGGGCGTGACACGCACTGTCACCAATGTCGGCCAGGTCGATGCCGTGTACAAGTCATTCCTCCAGCCTCCTGCCGGTGTCGAGATGGTCGTTGAGCCACCGGTGCTTGTGTTTAGCAAGGAGAAGAAGGTGCACAGCTTCAAGGTGACATTCAAGGCAACAAGGAGAGTTCAGGGTGACTACAGATTTGGAAGTTTGGCATGGCATGATGGTGGCAGCCACTGGGTCAGAATCCCCATCGCAGTTCGCATCGTGATTGAAGATATCTATTCCAAGATTGCCTAA
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| CDS seq | ATGTTCCCCTTGTCCCCGTCGACTATGAGATCGCCTACAGCATTTTCCAGTATTGCATGTAGCAACAGTAAAACTGGTGTCCCAAAGGCGAAGATATCATTCAGCCGGATGACAATTGGAAGCGAAATTTCAGCCCCCAAAATAGCAGCTTTCTCATCGAGGGGTCCTAGTCCTGTCTATCCTGGGGTTCTCAAGCCAGACATTGCTGCACCGGGGGTTTCAATTTTAGCCGCTTCGCCAAAGACTTCCATTTCTAAAGGTGTTCCCTATAATTTCGACTCTGGAACATCTATGGCTTGCCCCCATGTAACTGGGATCATCGCCGTGCTCAGGTCCCTGCATCCTGAATGGTCACCTGCCGCCGTTAAATCTGCAATCATGACAACTGCACTTACTTATGATAACAATGGGATGCCGATACAAGCTAACGGAAAAACCCCAAAGATTTCCGATCCTTTCGATTATGGAGCAGGATTTGTTAATCCGAGCAAGGCAGCTGATCCTGGCCTCGTCTATGACATTGCGGCATCTGACTACCTCAAATTCTTCAACTGCATGGGAGGATTAGCCACAGGCGGAAACTGCACGACGACAAGAGGATCAATCGCTGAACTGAATCTCCCGTCCATCGCCATCCCCAACCTCACGACATTCCAGGGCGTGACACGCACTGTCACCAATGTCGGCCAGGTCGATGCCGTGTACAAGTCATTCCTCCAGCCTCCTGCCGGTGTCGAGATGGTCGTTGAGCCACCGGTGCTTGTGTTTAGCAAGGAGAAGAAGGTGCACAGCTTCAAGGTGACATTCAAGGCAACAAGGAGAGTTCAGGGTGACTACAGATTTGGAAGTTTGGCATGGCATGATGGTGGCAGCCACTGGGTCAGAATCCCCATCGCAGTTCGCATCGTGATTGAAGATATCTATTCCAAGATTGCCTAA
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| Protein seq | MFPLSPSTMRSPTAFSSIACSNSKTGVPKAKISFSRMTIGSEISAPKIAAFSSRGPSPVYPGVLKPDIAAPGVSILAASPKTSISKGVPYNFDSGTSMACPHVTGIIAVLRSLHPEWSPAAVKSAIMTTALTYDNNGMPIQANGKTPKISDPFDYGAGFVNPSKAADPGLVYDIAASDYLKFFNCMGGLATGGNCTTTRGSIAELNLPSIAIPNLTTFQGVTRTVTNVGQVDAVYKSFLQPPAGVEMVVEPPVLVFSKEKKVHSFKVTFKATRRVQGDYRFGSLAWHDGGSHWVRIPIAVRIVIEDIYSKIA |
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| Function | Subtilisin-like protease SBT3.11 [UniProtKB/Swiss-Prot:Q1PDX5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_04G0026900 | OsMH63_04T0026900.1 | Chr04 | 1684046 | 1685606 | + | maker | ||
| CDS seq | ATGTTCCCCTTGTCCCCGTCGACTATGAGATCGCCTACAGCATTTTCCAGTATTGCATGTAGCAACAGTAAAACTGGTGTCCCAAAGGCGAAGATATCATTCAGCCGGATGACAATTGGAAGCGAAATTTCAGCCCCCAAAATAGCAGCTTTCTCATCGAGGGGTCCTAGTCCTGTCTATCCTGGGGTTCTCAAGCCAGACATTGCTGCACCGGGGGTTTCAATTTTAGCCGCTTCGCCAAAGACTTCCATTTCTAAAGGTGTTCCCTATAATTTCGACTCTGGAACATCTATGGCTTGCCCCCATGTAACTGGGATCATCGCCGTGCTCAGGTCCCTGCATCCTGAATGGTCACCTGCCGCCGTTAAATCTGCAATCATGACAACTGCACTTACTTATGATAACAATGGGATGCCGATACAAGCTAACGGAAAAACCCCAAAGATTTCCGATCCTTTCGATTATGGAGCAGGATTTGTTAATCCGAGCAAGGCAGCTGATCCTGGCCTCGTCTATGACATTGCGGCATCTGACTACCTCAAATTCTTCAACTGCATGGGAGGATTAGCCACAGGCGGAAACTGCACGACGACAAGAGGATCAATCGCTGAACTGAATCTCCCGTCCATCGCCATCCCCAACCTCACGACATTCCAGGGCGTGACACGCACTGTCACCAATGTCGGCCAGGTCGATGCCGTGTACAAGTCATTCCTCCAGCCTCCTGCCGGTGTCGAGATGGTCGTTGAGCCACCGGTGCTTGTGTTTAGCAAGGAGAAGAAGGTGCACAGCTTCAAGGTGACATTCAAGGCAACAAGGAGAGTTCAGGGTGACTACAGATTTGGAAGTTTGGCATGGCATGATGGTGGCAGCCACTGGGTCAGAATCCCCATCGCAGTTCGCATCGTGATTGAAGATATCTATTCCAAGATTGCCTAA
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| Protein seq | MFPLSPSTMRSPTAFSSIACSNSKTGVPKAKISFSRMTIGSEISAPKIAAFSSRGPSPVYPGVLKPDIAAPGVSILAASPKTSISKGVPYNFDSGTSMACPHVTGIIAVLRSLHPEWSPAAVKSAIMTTALTYDNNGMPIQANGKTPKISDPFDYGAGFVNPSKAADPGLVYDIAASDYLKFFNCMGGLATGGNCTTTRGSIAELNLPSIAIPNLTTFQGVTRTVTNVGQVDAVYKSFLQPPAGVEMVVEPPVLVFSKEKKVHSFKVTFKATRRVQGDYRFGSLAWHDGGSHWVRIPIAVRIVIEDIYSKIA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0121100 | SBH | 0.198895 | 0.203972 | 2.960203 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g03810 | SBH | 0.110967 | 0.229411 | 0.080768 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0121100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001000 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0000960 | SBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0036520 | SBH | 0.155017 | 2.228694 | 1.142209 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0001050 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0001130 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0024300 | RBH | 0.010534 | 0.330101 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0001270 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0023800 | RBH | 0.6319025 | 0 | 0.02575 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001110 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0001110 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001120 | SBH | 3.698248 | 10.628968 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0000960 | SBH | 0.146996 | 0.0 | 0.446234 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0001150 | SBH | 0.030854 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G001070 | RBH | 0.102419 | 0.0 | 0.128318 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001120 | SBH | 0.305872 | 0.0 | 0.0 |
