Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0509200 | OGI:03083400 | 5/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:32938405-32939060 | ||||||||
| Gene Symbol | PR5 | ||||||||||
| DNA seq | TCAGCCGACGGGAGGAGGAGGGCGTCGGCGGCCGGCGAGGGGCGATGCGGCGGCGGTGGGGGGAGAAGCTGCGGGTGGGCGGCGGGGAGGGGCGGCGAGGAGCAGAGCGCGGGTGGTGGGGGTAGGAGCGGCGCGCGGGCTCCCCCGTCGGCCGCTGCCCACGAGGCTCACGTCATAGAAGTCCTTCCCGTCGGCGCCGCCCAGCGTGAACTCCGCGAGGGTGACGGGCGGCGCGCCGCCGAGGGAGCAGCTCACGGCGCCGCCGAAGTCCCCCGTGGCGCAGGCGAGGGACGCGGTGCTGTAGGGTGCACAGTCCGTGCGCGCCCACAAGCGGCCGGACCAACCATCCGGGGCTAGGAATGAGACGTTGGCGTTGGGCGACAGCCCGAAGTCGCCGCCCCCAACAGCCCCCGACCGCTGTGTTTCCGGACAAGGTGGTCACCCAGACGATGTAGGTGTAGTTGTTGCGCAGCGTGAAGACCGTCGTGCCAGCTGCCTCAGCGCCGAACTGCAACTGCGACCATAGGAACCCTGCATTGAGACACGCCATTGTTAAAGAATGAAGATGTGTGCTAACAGCCTAAAGTTAACCGGCCTGAAAGTTTCTCGGACTTACCAACGAGGAGTAGAAGGGCTGAAGATCGTTCAAATTCCAT
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| CDS seq | ATGGAATTTGAACGATCTTCAGCCCTTCTACTCCTCGTTGGGTTCCTATGGTCGCAGTTGCAGTTCGGCGCTGAGGCAGCTGGCACGACGGTCTTCACGCTGCGCAACAACTACACCTACATCGTCTGGCGGTCGGGGGCTGTTGGGGGCGGCGACTTCGGGCTGTCGCCCAACGCCAACGTCTCATTCCTAGCCCCGGATGGTTGGTCCGGCCGCTTGTGGGCGCGCACGGACTGTGCACCCTACAGCACCGCGTCCCTCGCCTGCGCCACGGGGGACTTCGGCGGCGCCGTGAGCTGCTCCCTCGGCGGCGCGCCGCCCGTCACCCTCGCGGAGTTCACGCTGGGCGGCGCCGACGGGAAGGACTTCTATGACGTGAGCCTCGTGGGCAGCGGCCGACGGGGGAGCCCGCGCGCCGCTCCTACCCCCACCACCCGCGCTCTGCTCCTCGCCGCCCCTCCCCGCCGCCCACCCGCAGCTTCTCCCCCCACCGCCGCCGCATCGCCCCTCGCCGGCCGCCGACGCCCTCCTCCTCCCGTCGGCTGA
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| Protein seq | MEFERSSALLLLVGFLWSQLQFGAEAAGTTVFTLRNNYTYIVWRSGAVGGGDFGLSPNANVSFLAPDGWSGRLWARTDCAPYSTASLACATGDFGGAVSCSLGGAPPVTLAEFTLGGADGKDFYDVSLVGSGRRGSPRAAPTPTTRALLLAAPPRRPPAASPPTAAASPLAGRRRPPPPVG |
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| Function | Pathogenesis-related protein 5 [UniProtKB/Swiss-Prot:P28493] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0509200 | OsMH63_03T0509200.1 | Chr03 | 32938405 | 32939060 | - | maker | ||
| CDS seq | ATGGAATTTGAACGATCTTCAGCCCTTCTACTCCTCGTTGGGTTCCTATGGTCGCAGTTGCAGTTCGGCGCTGAGGCAGCTGGCACGACGGTCTTCACGCTGCGCAACAACTACACCTACATCGTCTGGCGGTCGGGGGCTGTTGGGGGCGGCGACTTCGGGCTGTCGCCCAACGCCAACGTCTCATTCCTAGCCCCGGATGGTTGGTCCGGCCGCTTGTGGGCGCGCACGGACTGTGCACCCTACAGCACCGCGTCCCTCGCCTGCGCCACGGGGGACTTCGGCGGCGCCGTGAGCTGCTCCCTCGGCGGCGCGCCGCCCGTCACCCTCGCGGAGTTCACGCTGGGCGGCGCCGACGGGAAGGACTTCTATGACGTGAGCCTCGTGGGCAGCGGCCGACGGGGGAGCCCGCGCGCCGCTCCTACCCCCACCACCCGCGCTCTGCTCCTCGCCGCCCCTCCCCGCCGCCCACCCGCAGCTTCTCCCCCCACCGCCGCCGCATCGCCCCTCGCCGGCCGCCGACGCCCTCCTCCTCCCGTCGGCTGA
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| Protein seq | MEFERSSALLLLVGFLWSQLQFGAEAAGTTVFTLRNNYTYIVWRSGAVGGGDFGLSPNANVSFLAPDGWSGRLWARTDCAPYSTASLACATGDFGGAVSCSLGGAPPVTLAEFTLGGADGKDFYDVSLVGSGRRGSPRAAPTPTTRALLLAAPPRRPPAASPPTAAASPLAGRRRPPPPVG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0835945 | 0 | 0.0306245 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g46060 | SBH | 5.476479 | 3.978871 | 1.358510 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0028880 | SBH | 0.000000 | 46.478554 | 1.785909 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0028580 | SBH | 0.0 | 3.326456 | 1.499670 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0028670 | SBH | 0.0 | 18.792002 | 2.486751 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0033530 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0028420 | SBH | 0.0 | 0.0 | 4.015446 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0028130 | SBH | 0.0 | 2.260654 | 0.217806 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0510400 | SBH | 8.5316555 | 0.1302985 | 0.8747375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0028500 | SBH | 0.000000 | 0.327923 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0028550 | SBH | 0.0 | 21.729006 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0033130 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0028340 | SBH | 0.111964 | 0.897572 | 0.541415 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0028290 | SBH | 0.000000 | 5.208142 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G032870 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0032710 | RBH | 0.0 | 0.0 | 0.0 |
