Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0438500 | OGI:03071900 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:28196341-28197117 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGGGTTTGGACTTTTTCTTGTTCCAACAGCAACAAAAAATCTTCGTCGCATATGGGCTTTTCCTAGTGTTTTACTTTTAAGTATAGCTATGGTATTCTCAGTTCACCTGTCTATTCAACAAATAAATGGAAGTTCTATCTATCAATATCTATGGTCTTGGACCGTCAATAATGATTTTTCCTTAGAATTTGGATACTTAATCGACCCGCTTACTTCTATTATGTTAATACTAATTACTACTGTAGGAATCCTGGTTCTTATTTATAGTGATGATTATATGTCTCACGATGAGGGATATTTGAGATTTTTTGTTTATATAAGTTTTTTCAATACTTCCATGTTGGGATTGGTTACTAGTTCCAATTTGATACAAATTTATTTTTTTTGGGAGCTTGTGGGAATGTGTTCCTATTTATTGATAGGCTTTTGGTTTACACGGCTAATTGCAGCGAGTGCTTGTCAAAAAGCTTTTATAACTAGTCGTGTAGGGGATTTTGGTCTGTTATTAGGAATTCTAGAATTCTAGGTTTTTTTTGGATAACAGGTAGTTTAGAGTTTCGGGATTTGTTTAAAATAGCTAATAACTGGATTCCTAATAATGAGATTAACTCCTTGCTTACTATTTTGTGTGCTTTTTTATTATTCCTTGGTGCAGTTGCGAAATCGGCACAATTCCCTCTTCACGTATGGTTACCCGATGCTATGGAAGGACCCACCCCCATTTCAGCTCTTATACACGCAGCAACTATGGTTGCTGCGGGGATTTTTCTTATAG
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| CDS seq | ATGGGGTTTGGACTTTTTCTTGTTCCAACAGCAACAAAAAATCTTCGTCGCATATGGGCTTTTCCTAGTGTTTTACTTTTAAGTATAGCTATGTTGCGAAATCGGCACAATTCCCTCTTCACGTATGGTTACCCGATGCTATGGAAGGACCCACCCCCATTTCAGCTCTTATACACGCAGCAACTATGGTTGCTGCGGGGATTTTTCTTATAG |
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| Protein seq | MGFGLFLVPTATKNLRRIWAFPSVLLLSIAMLRNRHNSLFTYGYPMLWKDPPPFQLLYTQQLWLLRGFFL |
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| Function | NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic [UniProtKB/Swiss-Prot:P0C328] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0438500 | OsMH63_03T0438500-mRNA-1 | Chr03 | 28196341 | 28197117 | + | maker | ||
| CDS seq | ATGGGGTTTGGACTTTTTCTTGTTCCAACAGCAACAAAAAATCTTCGTCGCATATGGGCTTTTCCTAGTGTTTTACTTTTAAGTATAGCTATGTTGCGAAATCGGCACAATTCCCTCTTCACGTATGGTTACCCGATGCTATGGAAGGACCCACCCCCATTTCAGCTCTTATACACGCAGCAACTATGGTTGCTGCGGGGATTTTTCTTATAG
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| Protein seq | MGFGLFLVPTATKNLRRIWAFPSVLLLSIAMLRNRHNSLFTYGYPMLWKDPPPFQLLYTQQLWLLRGFFL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 185.4586105 | 41.6702575 | 65.347738 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0028040 | RBH | 0.0 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007330 | SBH | 97.376884 | 20.273355 | 267.538727 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0215700 | RBH | 68.6823365 | 15.8490175 | 19.6511985 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0024440 | RBH | 178.013016 | 3.041622 | 63.844807 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0027850 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007170 | SBH | 12.474803 | 9.919649 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0015150 | RBH | 373.172974 | 1.660587 | 128.305374 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007380 | SBH | 1.536601 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
