Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0417200 | OGI:03068380 | 14/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:26601007-26602235 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACATAGAAGCCATCGCCTTTGATCCCATCTCCTCTACCACTTCCTCTCCTGGCTCCATGATTGGGTACTGGACCTCCTCTCCCACATCGATCGCCGGCACCGGATGCACCTTCGCCGCCCAGGTGACAGGACGCAACGGCAACAACGAGAAGAGCCACGGCAGAGATCGGCAAGGACGCGTTGATTGCAGGTTTGGTGCCTCCTCTTGCGTTGTTATGCGTAGATCTGATGCCCCCTGCTGCTTCCTTGCATATACCTTAGCATTTGTGTCGCCGCGAATGGGGTCGCAGCTGTAACACACAAGGGTTCATAGCGCCTGCCCAATGGCAATCTTGTTTGGTTCAGAGAAGTTGTTGCCGGCGGGCGGCGGCGATGAGCAGCAACAAATAGTATTTGCATAACCAGCATCTACGAGATAAAATTTACCACCAGGAACTTGAAAACCATGATTAAGTGCAATATGTAAAACTCTTGCATCTGAAGCTGATCCCTCCCATCCAGGATGTATATGCACAAACTTCAAATCAAAATCACAAGCAACCATACAATTCTGAGAGATTGTTTGCTTCCTATTTCTATATGGCTCTTGCTCATCCAATGGAAGTTTCATAGGGATATGAGTACCATCTATAGCACCAATACAATTCTACACAGAAACAAGACATGTCAAAGTTATTTTTGTCCAGTTCATGAAAAATTAGGATATTCAAAATATGAAATCAGAACAACTTAACAAGTGGCCATACCTGAAAAAAGGGGTAAAATTGTGGTTTCCTCAAGATTGGATGTGGGTGTAGGGATGGTGCACGAATGTAGACAGATGTGAGATTTGTGATTGCTTCCAGCACTGCTTTGAAATATCTATGTATTGTATCTGGACTATGCTGAAACCAATCTTGAAGTGTTTCATTGGTTGCATTTTTTGCCACTGTATATAAGAATATAGCAATATGCTCTTCTACTGAAACATATAGTGCCAGTTAGGTACTCTTTCTCACGTAACTTATTGACTAGTGCATGAAAAATGTCGACCTCCATACGGAAGTTTCTTTTGCATAATCTTTCACGTCCTGTTAAAATCTCATGTACACGGCAACCCCCTGTAAGTTTTGACGTGTGCATTGGTCTCCTAATACAAGATGATTGTGATGAATCTCCTAAAGTAGGCAGAACAAAATGAATGAACTCATCATCACTTTCTGATATACGTCGGTAGCTTGGATTCAT
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| CDS seq | ATGAATCCAAGCTACCGACGTATATCAGAAAGTGATGATGAGTTCATTCATTTTGTTCTGCCTACTTTAGGAGATTCATCACAATCATCTTGTATTAGGAGACCAATGCACACCTGCGACCCCATTCGCGGCGACACAAATGCTAAGGTATATGCAAGGAAGCAGCAGGGGGCATCAGATCTACGCATAACAACGCAAGAGGAGGCACCAAACCTGCAATCAACGCGTCCTTGCCGATCTCTGCCGTGGCTCTTCTCGTTGTTGCCGTTGCGTCCTGTCACCTGGGCGGCGAAGGTGCATCCGGTGCCGGCGATCGATGTGGGAGAGGAGGTCCAGTACCCAATCATGGAGCCAGGAGAGGAAGTGGTAGAGGAGATGGGATCAAAGGCGATGGCTTCTATGTGA
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| Protein seq | MNPSYRRISESDDEFIHFVLPTLGDSSQSSCIRRPMHTCDPIRGDTNAKVYARKQQGASDLRITTQEEAPNLQSTRPCRSLPWLFSLLPLRPVTWAAKVHPVPAIDVGEEVQYPIMEPGEEVVEEMGSKAMASM |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0417200 | OsMH63_03T0417200.1 | Chr03 | 26601007 | 26602235 | - | maker | ||
| CDS seq | ATGAATCCAAGCTACCGACGTATATCAGAAAGTGATGATGAGTTCATTCATTTTGTTCTGCCTACTTTAGGAGATTCATCACAATCATCTTGTATTAGGAGACCAATGCACACCTGCGACCCCATTCGCGGCGACACAAATGCTAAGGTATATGCAAGGAAGCAGCAGGGGGCATCAGATCTACGCATAACAACGCAAGAGGAGGCACCAAACCTGCAATCAACGCGTCCTTGCCGATCTCTGCCGTGGCTCTTCTCGTTGTTGCCGTTGCGTCCTGTCACCTGGGCGGCGAAGGTGCATCCGGTGCCGGCGATCGATGTGGGAGAGGAGGTCCAGTACCCAATCATGGAGCCAGGAGAGGAAGTGGTAGAGGAGATGGGATCAAAGGCGATGGCTTCTATGTGA
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| Protein seq | MNPSYRRISESDDEFIHFVLPTLGDSSQSSCIRRPMHTCDPIRGDTNAKVYARKQQGASDLRITTQEEAPNLQSTRPCRSLPWLFSLLPLRPVTWAAKVHPVPAIDVGEEVQYPIMEPGEEVVEEMGSKAMASM |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.8955125 | 63.941759 | 43.24074 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0622500 | RBH | 3.553726 | 3.495456 | 8.753943 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g42464 | RBH | 1.749177 | 1.539302 | 1.748584 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0622500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0215000 | RBH | 0.0600705 | 0.2138135 | 0.220623 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0420800 | RBH | 1.9928485 | 63.000633 | 3.5219425 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
