Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0297500 | OGI:03048320 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:19036477-19037837 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACCTTTGACAGCTATTGTAGAGGGCATTATGCATAGGACAACGGTCGTACGGTCTGGATTCGTTAACAATGTCGAGTGTTGCCCTCGACCATTGTTCGACCCAAAGTGTCATCTTAGCAAAAATATTTCGCCGCACGCTAGCATCTGCCTTCCTATTTTGCCTGCAAAAACTCATCATTAAGTGTTGAGGTAAGTAATATAATTCGGACACACGCAAATTAATGGGAATGCATTTAAATATAACTTACAAGTGTATCTTGGGGGGGACCGTTTCACCAAGCGGGACTGGCACTTCTTGGTAAAGGCCAAATTGCCTCATTACACGCTGCGGACTGTACGCCTCAACTGCTATATCGTACAGAAGCATCTTTTTCGTCAGCCAGTAAGACGAGTCACGCAGGCAGAGTGTATTGAGGCCAGTAGGGGCACGGCGTTGTGTCTCCTCGTCGGTGTACGGACACCACTGAACGTTATCCTCCTTAAGTAGATTGAACACTTCAGTGAAGTATTCGTACGCACTTCGAACCTGAACGTTCGCCCACTGTGGCTGTATGTTATGAAATAAATATTAAGATTATATATGTACGAAATAAATGCAAATGTTAAAAAAAAATATACATACCGGTCCCCAGCACCAATGCATGCCATAAGTAGGCCTATCATCTGTAGTGTTACCAAATAAGGTCGAATCAGCCATAGGTTCAGGCATGTACGGTCATCCCAATGGAAAGCGTTCATACGACCATAGCATGACCAACAACGGACAACCAGTAAACACAGGCTGCTTAAAGCTTGTCTTTGTGCATGCTTCACAAAGACCTCGGTAAGTTGCAACCAAAACTGTTGATCCCCAACTCCACTGGGGAAAGCTTTGTATGTTGCCCTGCACAATAAACCTTGCTAAGTTAATCATTCTTGCATCCACTGTGTTTCTGTGTCCACTTGTGAACATAACCCATCCAAAATGCCATAGAAGGTACGCCTCCAAATGCAATTCCACATGGTAATTTTCCGTGTCGTCTTTCATGTAACCAACCTACAAAGGTACATTGAAAAGTTCAGTAACAAAACATAATATCATCAATGCGAAGTTGTATGGTCGAATTAGTTTTACCTCGAACTGGCTGAGCCAGTGTAACGTAGGGCCGCGCGCCTCATCTTCAGAGAAAAAACCTTTTATGTCGCTATCATCCTCTGGAACAATGCAAGCATATCTTCCAATGATATCATCCCTCCAATCCACTGGTGGGTCAGGGAGGACAATTGCCTGTCCTGCAAGTGGCAGCCTTATAAGCATGGATACATCTTGCAGTGTAATTGCCATCTCTCCACACGGGAGATGGAAAGTGTGAGTCTCCG
More
|
||||||||||
| CDS seq | ATGGCAATTACACTGCAAGATGTATCCATGCTTATAAGGCTGCCACTTGCAGGACAGGCAATTGTCCTCCCTGACCCACCAGTGGATTGGAGGGATGATATCATTGGAAGATATGCTTGCATTGTTCCAGAGGATGATAGCGACATAAAAGGTTTTTTCTCTGAAGATGAGGCGCGCGGCCCTACGTTACACTGGCTCAGCCAGTTCGAGGTTGGTTACATGAAAGACGACACGGAAAATTACCATGTGGAATTGCATTTGGAGGCGTACCTTCTATGGCATTTTGGATGGGTTATGTTCACAAGTGGACACAGAAACACAGTGGATGCAAGAATGATTAACTTAGCAAGGTTTATTGTGCAGGGCAACATACAAAGCTTTCCCCAGTGGAGTTGGGGATCAACAGTTTTGGTTGCAACTTACCGAGGTCTTTGTGAAGCATGCACAAAGACAAGCTTTAAGCAGCCTGTGTTTACTGGTTGTCCGTTGTTGCCACAGTGGGCGAACGTTCAGGTTCGAAGTGCGTACGAATACTTCACTGAAGTGTTCAATCTACTTAAGGAGGATAACGTTCAGTGGTGTCCGTACACCGACGAGGAGACACAACGCCGTGCCCCTACTGGCCTCAATACACTCTGCCTGCGTGACTCGTCTTACTGGCTGACGAAAAAGATGCTTCTGTACGATATAGCAGTTGAGGCGTACAGTCCGCAGCGTGTAATGAGGCAATTTGGCCTTTACCAAGAAGTGCCAGTCCCGCTTGGTGAAACGGTCCCCCCCAAGATACACTTGCAAAATAGGAAGGCAGATGCTAGCGTGCGGCGAAATATTTTTGCTAAGATGACACTTTGGGTCGAACAATGGTCGAGGGCAACACTCGACATTGTTAACGAATCCAGACCGTACGACCGTTGTCCTATGCATAATGCCCTCTACAATAGCTGTCAAAGGTAG
More
|
||||||||||
| Protein seq | MAITLQDVSMLIRLPLAGQAIVLPDPPVDWRDDIIGRYACIVPEDDSDIKGFFSEDEARGPTLHWLSQFEVGYMKDDTENYHVELHLEAYLLWHFGWVMFTSGHRNTVDARMINLARFIVQGNIQSFPQWSWGSTVLVATYRGLCEACTKTSFKQPVFTGCPLLPQWANVQVRSAYEYFTEVFNLLKEDNVQWCPYTDEETQRRAPTGLNTLCLRDSSYWLTKKMLLYDIAVEAYSPQRVMRQFGLYQEVPVPLGETVPPKIHLQNRKADASVRRNIFAKMTLWVEQWSRATLDIVNESRPYDRCPMHNALYNSCQR |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0297500 | OsMH63_03T0297500.1 | Chr03 | 19036477 | 19037837 | - | maker | ||
| CDS seq | ATGGCAATTACACTGCAAGATGTATCCATGCTTATAAGGCTGCCACTTGCAGGACAGGCAATTGTCCTCCCTGACCCACCAGTGGATTGGAGGGATGATATCATTGGAAGATATGCTTGCATTGTTCCAGAGGATGATAGCGACATAAAAGGTTTTTTCTCTGAAGATGAGGCGCGCGGCCCTACGTTACACTGGCTCAGCCAGTTCGAGGTTGGTTACATGAAAGACGACACGGAAAATTACCATGTGGAATTGCATTTGGAGGCGTACCTTCTATGGCATTTTGGATGGGTTATGTTCACAAGTGGACACAGAAACACAGTGGATGCAAGAATGATTAACTTAGCAAGGTTTATTGTGCAGGGCAACATACAAAGCTTTCCCCAGTGGAGTTGGGGATCAACAGTTTTGGTTGCAACTTACCGAGGTCTTTGTGAAGCATGCACAAAGACAAGCTTTAAGCAGCCTGTGTTTACTGGTTGTCCGTTGTTGCCACAGTGGGCGAACGTTCAGGTTCGAAGTGCGTACGAATACTTCACTGAAGTGTTCAATCTACTTAAGGAGGATAACGTTCAGTGGTGTCCGTACACCGACGAGGAGACACAACGCCGTGCCCCTACTGGCCTCAATACACTCTGCCTGCGTGACTCGTCTTACTGGCTGACGAAAAAGATGCTTCTGTACGATATAGCAGTTGAGGCGTACAGTCCGCAGCGTGTAATGAGGCAATTTGGCCTTTACCAAGAAGTGCCAGTCCCGCTTGGTGAAACGGTCCCCCCCAAGATACACTTGCAAAATAGGAAGGCAGATGCTAGCGTGCGGCGAAATATTTTTGCTAAGATGACACTTTGGGTCGAACAATGGTCGAGGGCAACACTCGACATTGTTAACGAATCCAGACCGTACGACCGTTGTCCTATGCATAATGCCCTCTACAATAGCTGTCAAAGGTAG
More
|
|||||||
| Protein seq | MAITLQDVSMLIRLPLAGQAIVLPDPPVDWRDDIIGRYACIVPEDDSDIKGFFSEDEARGPTLHWLSQFEVGYMKDDTENYHVELHLEAYLLWHFGWVMFTSGHRNTVDARMINLARFIVQGNIQSFPQWSWGSTVLVATYRGLCEACTKTSFKQPVFTGCPLLPQWANVQVRSAYEYFTEVFNLLKEDNVQWCPYTDEETQRRAPTGLNTLCLRDSSYWLTKKMLLYDIAVEAYSPQRVMRQFGLYQEVPVPLGETVPPKIHLQNRKADASVRRNIFAKMTLWVEQWSRATLDIVNESRPYDRCPMHNALYNSCQR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g31670 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0020410 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0020260 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0020040 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0301500 | RBH | 0.024991 | 0.0425885 | 0.00406 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0020240 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0020260 | SBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0020350 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0020220 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0020090 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
