Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0107800 | OGI:03017250 | 11/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:6554585-6555016 | ||||||||
| Gene Symbol | NAC56, ONAC056, ONAC56, OsSWN5 | ||||||||||
| DNA seq | ATGGAGGCGGGTGCGGGCGGTGGCGCGGGACGCGGAGACGGAGGTTGAGGCGGCGGCTGGCTCTCGGGTTCCGCTTCTACCCAACAGAGGAGGAGCTGATATGCTTCTACCTCCGCAACAAGCTCGACGGCCTCCGCGACGACATCGAGTGCGTCATCCCCGTCTTCGACATCTACTCCGTCGACCCGTTGCAGCTCTCAGGTACCAGCACACACGTGTGCATTGCGTTCGTCGTACGTCGTCGCGCGAGCGCCGCGTCACCTGTATACACCTGCAGAGATTCACCACGAGATGCTGGGCAGCGGCGGCGAGGAGGGGGAGCCGTGGTTCTACTTCTGCCCGCGGCAGGAGCGGGAGGTGCGGGGCGGGCGACCAAGCTGGACCACGCCGTCGGGGTCCTGGAAGGCGGTGGGCACGCCGGGGGTTGTCTAA
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| CDS seq | ATGGAGGCGGAGGAGGAGCTGATATGCTTCTACCTCCGCAACAAGCTCGACGGCCTCCGCGACGACATCGAGTGCGTCATCCCCGTCTTCGACATCTACTCCGTCGACCCGTTGCAGCTCTCAGAGATTCACCACGAGATGCTGGGCAGCGGCGGCGAGGAGGGGGAGCCGTGGTTCTACTTCTGCCCGCGGCAGGAGCGGGAGGTGCGGGGCGGGCGACCAAGCTGGACCACGCCGTCGGGGTCCTGGAAGGCGGTGGGCACGCCGGGGGTTGTCTAA |
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| Protein seq | MEAEEELICFYLRNKLDGLRDDIECVIPVFDIYSVDPLQLSEIHHEMLGSGGEEGEPWFYFCPRQEREVRGGRPSWTTPSGSWKAVGTPGVV |
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| Function | NAC domain-containing protein 90 [UniProtKB/Swiss-Prot:Q9FMR3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0107800 | OsMH63_03T0107800.1 | Chr03 | 6554585 | 6555016 | + | maker | ||
| CDS seq | ATGGAGGCGGAGGAGGAGCTGATATGCTTCTACCTCCGCAACAAGCTCGACGGCCTCCGCGACGACATCGAGTGCGTCATCCCCGTCTTCGACATCTACTCCGTCGACCCGTTGCAGCTCTCAGAGATTCACCACGAGATGCTGGGCAGCGGCGGCGAGGAGGGGGAGCCGTGGTTCTACTTCTGCCCGCGGCAGGAGCGGGAGGTGCGGGGCGGGCGACCAAGCTGGACCACGCCGTCGGGGTCCTGGAAGGCGGTGGGCACGCCGGGGGTTGTCTAA
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| Protein seq | MEAEEELICFYLRNKLDGLRDDIECVIPVFDIYSVDPLQLSEIHHEMLGSGGEEGEPWFYFCPRQEREVRGGRPSWTTPSGSWKAVGTPGVV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.1906715 | 0.0551335 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0119966 | SBH | 0.0 | 0.0 | 0.916616 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g02800 | SBH | 0.0 | 0.0 | 0.241658 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0119966 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0009220 | RBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0009100 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0009160 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0009100 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0001660 | SBH | 1.274041 | 0.000000 | 2.020214 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0613900 | SBH | 1.1914435 | 15.776261 | 2.1388865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0001610 | SBH | 0.058228 | 0.194995 | 0.397414 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0108400 | RBH | 0 | 0.0483665 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0008980 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0009060 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0001650 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0009040 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0001690 | SBH | 0.047897 | 0.562542 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G009010 | RBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0008890 | RBH | 0.000000 | 0.000000 | 0.000000 |
