Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_03G0046300 OGI:03007650 | 16/16 Minghui 63 | MH63RS3 | HZAU Chr03:2933655-2938677
Gene Symbol Orysa;DP3
DNA seq

GTCGATTTCTCATTTCTTTCTCTCCCTCCAATTTGCCCCCTCTTTGTCGTTTTAGGGTTTCCGCGCTCCAACTCCTCCCCAATTCTGGTCCCCGATTCGCGCGATCTCGGCCACCCATGGTCTCCGGCGTCGCCCACCGCCCGGACGACGACGGCGGGCGCGCCGCCTCGACGTTCCAGCGCCCGCCGCAGCCGGCCGGCGCGCGGCCGTCCCTGGCCACGCCGCCGCCCTCGGGCGGAGCGCAATCCGCTTCGACGAGCGGCGGGAGCGCGGGCTCCCCGTCCAGCCGCAGCGAGCAGCATGTCCCCGCAGCCGCAGGCATGGCGGCGGGGGCGGCGGCGGCCTCTACTCCGATTAGTGAGAATACCTTCCTCCGCCTCAACGACCTTGACATCCACGGCGACGATGCGCCTTCCTCACAGGCTCCAACGAGGTCAGCGTTTGGTTTGCCAGTTTTCGCCGCGGGATTGCGTTTTTTTCCCAATGTTATTACAAGATTTTAAGATTTTGAGAATTTGGTTGGTTTTTGTTTTTCTCTGTAGCTGTACGCTACTTAAAATGCTCCGGAGATGCACCGGGTGGTTAAAATTGTCCGTAGTGTTGTAATTAGCTGTGTTTAGGCTGCAAAATGCTTAGGGAAGTGTATCCTGCCATCACTTTGATGTGTGGTTGCAAGTAAGATTTTCTGGGGATGCTTATACGATTATGCTCTGTAGGTTTACCTTGCTGAAAGTGTTAATTCTATATGTATACGGAGTAGTTCTCATCTGTAGTCTATTACACGTGTATACTGTACTCACGATGATCAGTAAAACATCAGTCATGTGACCTCTTTTGCTACATAGATTCCAGACTGTAGAACACTGCTGTTTGGATGCCAGTGCATGTTTTTCTGCATTATGAATTTGGAAGTACGACTTGGCAGAAGTTCTCTACCTCTTAAGGCTCCTTTTCAAAAAATAAATCCCTTCATTGTTATCTAGTTTTGTGCATTTGCAATAAGGGTTTTTGCTATGAATAAAATTATTCAGCAAGAAGAAGAAGAGAGGAGCACGAGCAGTTGGTCCTGACAAAGGTGGCAGGGGGCTGCGCCAGTTTAGTATGAAAGGTGTGTTAAATCCCATTTGTTCCCTATTAGTACACCATTTGAGTTTATTTATAAGCACCACAAGTATGTGCTATAAAAACTCATGATGACACTGTTTGTTCTTTTGCAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATACAACGAGGTTAGTGCTTTCCTCTTTCTACCGAGTTCATGTATCTTGTTCTGAGCATCTGATGGCATCATGTACGTGGTCACATCACATGGATTGAAGCAGCAAATTGAGATCACAAATGTTGCATGTGTCAGCTCCCTGTTTCTTTGCATAGTTGTCTTCTTGTTAACTCTATCCTTGAAGATTCAATCAGTTATTTCAAGAGGACTTAGGCTATGTATGCAATGTAAAACCTAATAGCAATATATGCACAGGGCAGGACTAGCTATTGCTCCAATAAGCCAACATGTTCATATTGTCCGTCCACCTGGTGGTATTGTCAAACAATTCATTATCTATAAAACTGCCATGTTCCGCATCATGATTTGGGGCTATAAAATTGGTAACTCACTCACATGTCTTATGTAACACTGCTGTTTGATCAGCTTGCTCAGATCTTACTATGGTGATGTGTTGTAATATGTGACATCCACCATATTGATCATTGTAAATCCGCTATACATATCACCCTCTTCTACTGTTATATTTAAACTAATAATCTGTCTTTGCATCTATTCATGTTCATGTTTGGAGTTCCTCAAAATTGCTAAAAACTATCATATTTTGTCTCTCTGGCAAAAAGTTGTAATAATTTTGGCTATGCATTTGTTGATAGTTTTCAATGTTTACCCTTATTGGTGAAGTCCAAGTCTCATAGTCCTTCTGACTTATCTTTATCAGGTGGCAGATGAACTTGTTGCCGAATTTGCAGATCCCAATAACAGCATTTTGCCACCAGATCCGGATAATCCCAATGCAGTTGAGAAATGACTTACCTGCATCACCAATTATTTCTTAAGTCAGTTGTATGCTCACTTTGTGTTAAATGCAGCAACAATATGACGAGAAAAATATACGGAGAAGGGTTTATGATGCTCTGAATGTTCTGATGGCTATGGAGATTATATCTAAAGATAAAAAGGAAATTCAGTGGAAGGGGTTGCCTCGAACCAGTATAAATGATATTGAAGATTTGCAGGTTTTTCGTCTTCTTTTCCCACTGGTTATCGACATTTGATGTACTTTTGGTAGTCATATTTATTTATTTATTTATGCTCTTTTACAGACGGAACTTGTAGGACTGAAAAGTAGGATTGAGAAGAAAAATACATATTTGCAGGAGCTGCAAGACCAAGTAATGATATAGCTCAACCTGCTTTTCTTTAGTCATGTCCAATGCAATATATAAAATGAACTGTTCTACTGAGCTAGCAGTGTACCATAGTCTTCAAATTGTGTGGCTTTAGTGGTAGATACTGTGATACACATAATGCCCTTACTTGGTAACATTGTTTTTGGCATGTTAAGTTTGTAGGTATGCAAAAGTTGATACAAAGAAATGAACAGCTATATGGTTCAGGAAACATTCCCTCGGGTGGAGTTGCATTACCATTTATCCTTGTTCAGGTGAATAGTTCATAAATTCTTTGTCTTCTATTCTCTTGTTTCATGGCACTGTTTCCTGCACATGACTTCAGGCTAAATGACAAGAATGAATCATGCAGACACGGCCTCATGCAACTGTGGAAGTTGAAATATCAGAAGATATGCAACTTGTACATTTTGACTTTAATAGGTAAAACAAGAATCCTGTTATTCTCTCCCATCTGGTCACACCTTTACAATTTATCTAGCAAGCCACACCTTTCTCTTTCTGTTTCCATTTTTCTATTCTTTCATGATATGATTGCAGAAGGTCCTCACTGGAAGGGCATCCTCTTATCTCATTTAAATTCTGGCAGTGGTCTTTTAACCCTTAAAATATAATATAATTCACTCTGTAAAAAAGAACTAAAATCTCAGCTGCTATATCAAATTTGGATGGTAGAGATTTTTGTCTCCAAACCTCTAGTGATGGGACGGTACAAGCGGAAGTGTAAATAATGTGACTTTTGAAAAGTGTTGTTAGCTTTTATTGGTTGAGCTAAGTCATCTAGTTTTAGTCCAATTACAGGTCGCAGGTCCTCATTATCCTAGTGACATTTGCCATATCACTAATTCTTGAATAATAGGGAGACATTGGCATCCTAAATTGGGAAGATGAGAGCCCAAGTGTGAAATTCATTTTACTTTTCTAAAAGAGTAAATTGCATTCACGGTACAAGAATTTGTTAGGTGGGTGCATTCTATTGTAAGAACTTGAAAACTGAACAAACTGGCTCACCAACTTGACTAGACGGTGCGCTTTTGGTCAAGGTGAATACCACACGGAATTTTCGGCCACGTTAGCAAGACATGTCATTCATGTAACATGTTTTTGCTTCTTCCTTCAAACGACAGATAGACTGAAGGTTCATTTTAGCAAATATCCCCAGTTCAATGGTAACAATATCAAATCAAAAGCTCTATAGGTCTAGATTTAGCGTTGATAGAGGGCACTGTAATCTCTTGATTGATGCATGAATCAATTCATAGTTATACTGTCAATTGAACAATGAAACTAGACAGTAGAAATTTAGCTTGATCTAAAAGGCCAACGCTTGCTTCGAGAAGACTAGCATCACCATCACCCGCCGCCACCACTGACGAAGCACACAGTAACATCTTTGAGTTAGCTAGCCTGTTCGATTTTTGCCTATATATTTCCAAAGTTTGATCATGTGAACAGGAATGATATGCATTGCCACATCTTGCCGTAGATGATCTAGCTTCACAAGATTCATAGTTCACCAAAAGTAATGGATCAACCTGGGAGTCGTGAATTCATAATAAATGGAAAGAAGCAGACATTATATATCATCTGGAACAATTAGAACATGAAAAATAGTCGGGAGTTTGTTTCAAAATTGTTGGGATGGGAGATAAGCGATTTGTGTGCCTGATGTGCAATCGACAGCGTCCCTTGCTGATGTGGCAAAAATATGTAATATGGCCTTCACTTTGAACAAATATGCACCATATAGCCAAGTTAATGGACTAATATGCTCAAATTTCAAGTTCTAGTACTAAAACACGCCCACCTGACAAGTTCTTGCACCATGAGTGCAATTTACTCTTTCTAAAAGGAACTATCAAATGAATGAAACATATCAAAATATGCCTTTTATTTTTGTTGAAAGAAATAATTTGATATCGGTGCAGCCTCTTAGATTTCCCTTAGATCAGCGTAAGTTCTTGATATTTACATTTCTGAAACTGCAGCACACCATTTGAGTTGCATGATGACTCATTTGTACTGAAAGCAATGAGTTCTTGTGGAGAAGAACAAATCGACGGTATTCATGATCTAATTTCAAATGGAGGTGAGAGCTCAAGCATGCCAAATATTTATAGGCAGCAAGTGCAGCAACCTGCAAGATCAACTAATGGTACAGCTAGATTGCCAAGCTCACCCCCTATTCCAGGAATACTGAAAGGGCGAGTGAAGCACGAGCATTAGTGTAGTGTGTTTGTTGATTGTTGTCTGGCGTGTTTGGTTTATTATTTATTATTTTTTTGTGTAAATGGCCTGTAAATTAGTGGGCATTGGAAAAGTAGTTTATTCCGATTTAACGCTGCAGTCTGATTGGTAGAGTGGCGGGTGCCCTGACCAGACCTGTATCACTCCCCGAGTAACTTCTAACCGGCTTTTAATCTGTTCCGCCATGGTTGAGAAAAGACGTCTTTTAACGTCATGTAATTGTTTAAAGCATTTTGAAGTAGTTAGCATTTGATCTGAGTGAAATTTCAGCCTTTTGCATGCTTATTGTAGGCATATACATTTGTATTGGATATTTGCCTTAGTTATATGAT

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CDS seq

ATGGTCTCCGGCGTCGCCCACCGCCCGGACGACGACGGCGGGCGCGCCGCCTCGACGTTCCAGCGCCCGCCGCAGCCGGCCGGCGCGCGGCCGTCCCTGGCCACGCCGCCGCCCTCGGGCGGAGCGCAATCCGCTTCGACGAGCGGCGGGAGCGCGGGCTCCCCGTCCAGCCGCAGCGAGCAGCATGTCCCCGCAGCCGCAGGCATGGCGGCGGGGGCGGCGGCGGCCTCTACTCCGATTAGTGAGAATACCTTCCTCCGCCTCAACGACCTTGACATCCACGGCGACGATGCGCCTTCCTCACAGGCTCCAACGAGCAAGAAGAAGAAGAGAGGAGCACGAGCAGTTGGTCCTGACAAAGGTGGCAGGGGGCTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATACAACGAGGTGGCAGATGAACTTGTTGCCGAATTTGCAGATCCCAATAACAGCATTTTGCCACCAGATCCGGATAATCCCAATGCACAACAATATGACGAGAAAAATATACGGAGAAGGGTTTATGATGCTCTGAATGTTCTGATGGCTATGGAGATTATATCTAAAGATAAAAAGGAAATTCAGTGGAAGGGGTTGCCTCGAACCAGTATAAATGATATTGAAGATTTGCAGACGGAACTTGTAGGACTGAAAAGTAGGATTGAGAAGAAAAATACATATTTGCAGGAGCTGCAAGACCAATTTGTAGGTATGCAAAAGTTGATACAAAGAAATGAACAGCTATATGGTTCAGGAAACATTCCCTCGGGTGGAGTTGCATTACCATTTATCCTTGTTCAGACACGGCCTCATGCAACTGTGGAAGTTGAAATATCAGAAGATATGCAACTTGTACATTTTGACTTTAATAGAAGGTCCTCACTGGAAGGGCATCCTCTTATCTCATTTAAATTCTGGCAGTGGTCTTTTAACCCTTAA

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Protein seq

MVSGVAHRPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQSASTSGGSAGSPSSRSEQHVPAAAGMAAGAAAASTPISENTFLRLNDLDIHGDDAPSSQAPTSKKKKRGARAVGPDKGGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNSILPPDPDNPNAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWKGLPRTSINDIEDLQTELVGLKSRIEKKNTYLQELQDQFVGMQKLIQRNEQLYGSGNIPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNRRSSLEGHPLISFKFWQWSFNP

Function Transcription factor-like protein DPB [UniProtKB/Swiss-Prot:Q9FNY2]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_03G0046300 OsMH63_03T0046300-mRNA-1 Chr03 2933655 2936705 + maker
CDS seq

ATGGTCTCCGGCGTCGCCCACCGCCCGGACGACGACGGCGGGCGCGCCGCCTCGACGTTCCAGCGCCCGCCGCAGCCGGCCGGCGCGCGGCCGTCCCTGGCCACGCCGCCGCCCTCGGGCGGAGCGCAATCCGCTTCGACGAGCGGCGGGAGCGCGGGCTCCCCGTCCAGCCGCAGCGAGCAGCATGTCCCCGCAGCCGCAGGCATGGCGGCGGGGGCGGCGGCGGCCTCTACTCCGATTAGTGAGAATACCTTCCTCCGCCTCAACGACCTTGACATCCACGGCGACGATGCGCCTTCCTCACAGGCTCCAACGAGCAAGAAGAAGAAGAGAGGAGCACGAGCAGTTGGTCCTGACAAAGGTGGCAGGGGGCTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATACAACGAGGTGGCAGATGAACTTGTTGCCGAATTTGCAGATCCCAATAACAGCATTTTGCCACCAGATCCGGATAATCCCAATGCACAACAATATGACGAGAAAAATATACGGAGAAGGGTTTATGATGCTCTGAATGTTCTGATGGCTATGGAGATTATATCTAAAGATAAAAAGGAAATTCAGTGGAAGGGGTTGCCTCGAACCAGTATAAATGATATTGAAGATTTGCAGACGGAACTTGTAGGACTGAAAAGTAGGATTGAGAAGAAAAATACATATTTGCAGGAGCTGCAAGACCAATTTGTAGGTATGCAAAAGTTGATACAAAGAAATGAACAGCTATATGGTTCAGGAAACATTCCCTCGGGTGGAGTTGCATTACCATTTATCCTTGTTCAGACACGGCCTCATGCAACTGTGGAAGTTGAAATATCAGAAGATATGCAACTTGTACATTTTGACTTTAATAGAAGGTCCTCACTGGAAGGGCATCCTCTTATCTCATTTAAATTCTGGCAGTGGTCTTTTAACCCTTAA

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Protein seq

MVSGVAHRPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQSASTSGGSAGSPSSRSEQHVPAAAGMAAGAAAASTPISENTFLRLNDLDIHGDDAPSSQAPTSKKKKRGARAVGPDKGGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNSILPPDPDNPNAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWKGLPRTSINDIEDLQTELVGLKSRIEKKNTYLQELQDQFVGMQKLIQRNEQLYGSGNIPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNRRSSLEGHPLISFKFWQWSFNP

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Gene Transcript Chromosome Start End Strand Source
OsMH63_03G0046300 OsMH63_03T0046300-mRNA-2 Chr03 2933655 2938677 + maker
CDS seq

ATGGTCTCCGGCGTCGCCCACCGCCCGGACGACGACGGCGGGCGCGCCGCCTCGACGTTCCAGCGCCCGCCGCAGCCGGCCGGCGCGCGGCCGTCCCTGGCCACGCCGCCGCCCTCGGGCGGAGCGCAATCCGCTTCGACGAGCGGCGGGAGCGCGGGCTCCCCGTCCAGCCGCAGCGAGCAGCATGTCCCCGCAGCCGCAGGCATGGCGGCGGGGGCGGCGGCGGCCTCTACTCCGATTAGTGAGAATACCTTCCTCCGCCTCAACGACCTTGACATCCACGGCGACGATGCGCCTTCCTCACAGGCTCCAACGAGCAAGAAGAAGAAGAGAGGAGCACGAGCAGTTGGTCCTGACAAAGGTGGCAGGGGGCTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATACAACGAGGTGGCAGATGAACTTGTTGCCGAATTTGCAGATCCCAATAACAGCATTTTGCCACCAGATCCGGATAATCCCAATGCAGTTGAGAAATGA

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Protein seq

MVSGVAHRPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQSASTSGGSAGSPSSRSEQHVPAAAGMAAGAAAASTPISENTFLRLNDLDIHGDDAPSSQAPTSKKKKRGARAVGPDKGGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNSILPPDPDNPNAVEK

Gene Transcript Chromosome Start End Strand Source
OsMH63_03G0046300 OsMH63_03T0046300-mRNA-3 Chr03 2933655 2936705 + maker
CDS seq

ATGGTCTCCGGCGTCGCCCACCGCCCGGACGACGACGGCGGGCGCGCCGCCTCGACGTTCCAGCGCCCGCCGCAGCCGGCCGGCGCGCGGCCGTCCCTGGCCACGCCGCCGCCCTCGGGCGGAGCGCAATCCGCTTCGACGAGCGGCGGGAGCGCGGGCTCCCCGTCCAGCCGCAGCGAGCAGCATGTCCCCGCAGCCGCAGGCATGGCGGCGGGGGCGGCGGCGGCCTCTACTCCGATTAGTGAGAATACCTTCCTCCGCCTCAACGACCTTGACATCCACGGCGACGATGCGCCTTCCTCACAGGCTCCAACGAGCAAGAAGAAGAAGAGAGGAGCACGAGCAGTTGGTCCTGACAAAGGTGGCAGGGGGCTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATACAACGAGGTGGCAGATGAACTTGTTGCCGAATTTGCAGATCCCAATAACAGCATTTTGCCACCAGATCCGGATAATCCCAATGCACAACAATATGACGAGAAAAATATACGGAGAAGGGTTTATGATGCTCTGAATGTTCTGATGGCTATGGAGATTATATCTAAAGATAAAAAGGAAATTCAGTGGAAGGGGTTGCCTCGAACCAGTATAAATGATATTGAAGATTTGCAGACACGGCCTCATGCAACTGTGGAAGTTGAAATATCAGAAGATATGCAACTTGTACATTTTGACTTTAATAGAAGGTCCTCACTGGAAGGGCATCCTCTTATCTCATTTAAATTCTGGCAGTGGTCTTTTAACCCTTAA

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Protein seq

MVSGVAHRPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQSASTSGGSAGSPSSRSEQHVPAAAGMAAGAAAASTPISENTFLRLNDLDIHGDDAPSSQAPTSKKKKRGARAVGPDKGGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNSILPPDPDNPNAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWKGLPRTSINDIEDLQTRPHATVEVEISEDMQLVHFDFNRRSSLEGHPLISFKFWQWSFNP

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Gene Transcript Chromosome Start End Strand Source
OsMH63_03G0046300 OsMH63_03T0046300-mRNA-4 Chr03 2933655 2936569 + maker
CDS seq

ATGCAGCAACAATATGACGAGAAAAATATACGGAGAAGGGTTTATGATGCTCTGAATGTTCTGATGGCTATGGAGATTATATCTAAAGATAAAAAGGAAATTCAGTGGAAGGGGTTGCCTCGAACCAGTATAAATGATATTGAAGATTTGCAGACACGGCCTCATGCAACTGTGGAAGTTGAAATATCAGAAGATATGCAACTTGTACATTTTGACTTTAATAGGTAA

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Protein seq

MQQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWKGLPRTSINDIEDLQTRPHATVEVEISEDMQLVHFDFNR

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 3.1805735 17.323181 14.594578

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0152100 RBH 0.439617 0.259941 0.846046
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g05760 RBH 0.352687 0.468223 0.454672
Nipponbare | IRGSP 1.0 | RAP-db Os03g0152100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0004020 RBH 0.478472 0.0 1.783677
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0003940 RBH 0.259563 0.219668 0.883891
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0003980 RBH 1.588361 1.813711 5.096806
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0003930 RBH 0.060490 0.125704 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0004030 RBH 1.965705 5.366111 6.711684
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0263400 RBH 0.6215445 0.992475 1.5297265
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0003920 RBH 0.094966 0.170494 0.593911
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0046700 RBH 2.6547925 10.1200735 6.835498
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0004030 RBH 0.000000 0.045504 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0004000 RBH 0.0 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0003970 RBH 1.331823 4.906170 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0004030 RBH 0.310106 0.364627 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0004010 RBH 0.0 3.232328 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G003980 RBH 0.121821 0.000000 0.846312
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0003840 RBH 1.916035 10.203609 3.423839
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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