Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_02G0266800		OGI:02046650 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr02:17121112-17124983		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		GCAAGCAAAACCCACTCCTGCCTGTCGAATTCCTTTTAGACTTGATCATATTTCTTGGCTGTATAAACTTACATTAGGTTGCATATGGCTAAAAATTAAGTAGACATTATTCTGTGTATATATGATTTCTAGAAGCCAGCTGTTACAAAATTAAGTTTATTTACCAGGGTTCGAGTTTCTTGATGTGGATCGGGGGAATTTGAAGGCCACATCAGGATTAACCGAACAGGCTCTTATTGTTTCTCATTAACTGATGAGGTCGTTGGCACACCTTGATCTTACTACCGGCTGGTTAATGAACTGCTACCAAGTGAAAGTTGAGATTGATACTGAGTGCTCCATTGTCATACCCATGACCATGACAAGTTCATACACAAAAAATCTGCACAATAAAGTAGAAACAAGTAAAAACAAATCCAGAATTATGCGTCGTAGCTTAATAAACATTGACTGCTGGATATTATGAGAAGATAAAAAGGAATGTGCATTTGATTTATTGATACTTCAGCAAAGAGTTAGAGCAAAGCGCGCGCACACACCAGAGCACAGCGTACAGGTGGCACTGGCAACATAATTCTAGATAGCATTAAAAATGTAAATGAACTGGGAGTGAGCAAGTATTGGAGAAACACCTCTTTTTTCAGATATTTAGGTGTATTGGCTCAAAAGGTCCCATGTTTCTTACCAAGGGAAATAACAATACTACATATTTTCCGTTCCTGCATGCAATAGTCAATACTCAATAGACACAGTTACACCATTTATCTTTATCTAACAAAGGCGTTAATTATAACAGCAAAACCGAGTCATTATTTATTGGAATAAACTGTGTCCCGTACTCAAATACTTAGAGCAAAAGAGTGAGCCAAAATGCTACACGTTATATTCTGAGTTGAATCAATGCTAAAAAACTAAGATAAGCAAGAAAAAGCGGTGATTGTTCTGCAACAGTATCGGACAACATATACCTCTGGATTTTTCTCCAAACTTGTAATGAGAAGTTGATAACATTCATTGAAGACTTGAACATTTGAAGTTCTGACAGATTGACAAAACCTAAGATCTTGCATGTTGCACTCATATTAAGGTATTCTTGTCAAGCAACAAACCAAGGAACTGCAAGTCTGCAACAGCAACACCACGGTTCCCAAATTTAGCACATGGCATTTAGTAAGATAGAGCACAAATGCTATATATATGAAAACAACATTCGATCAATTCAAATGTGTAATGAAAAGCAGAAGTCAAAACTTACATGGCATGTGTCTCAGCCCAAAATGGGCTAAAATATGCTTGGTCTTTGTCCTACGGCTGAACTATGCACTGTACCAAGACAATATATGGCGTGGTACTAGAAATATTAGCCAAATAATTTAACAACAAAGTACTGAAATGGAACTGTTTTTCCCGAAATTAGAATATTCCTTGAATGATATACAAAATGCTGGACAAGATCTTTGCTTTCATACTGCTCTCTAGGAATCCTGAGAAGAACAAAAATTTAACTTGTTTTGACCAAAACAATTCCTCAACATGATTCCTCCGAAAATCATTTGCAGTCATTATCATCCTTCAGGAAACCGTTTTCAATCACCCCTTTCATCCCTTATCAAAATTATAAGCTCTCAAATTCCTCTTGCTTATTTTTAAACAAAGCCTTCAATGCGGCGTAATAGCAGAATCTGTCAGTACTGTACAGCTGTGCTGCTTCAGACTTCAGGAAATAGTCCACAACCATAGGAAAATGTCATTGGTGAGACCAGTGTACCACTCCACGTGGAAGAAGTGTTACATACATTTTACAGTCAACCAGCCCTGTTAGGCATAAGTAAATGATTAGCATACTTGAATGTTACTTCATTTGGAGTGCACTTATTCCTAAGCATCTCAGCTACAAGCTCCTCTGCATCCTGCCACCGCTCAGCTCTACACAAACCCTTCAATGTAGAGTTATAAGAAATAGCATCAGGCTTACATGACATGGTGCTCAATAACTTGAGGGCATCGTCCAAACGGCCTTGTTCAGAAAAGCCATTGATAAGGGCGTTATATGTAAAAATATCAGGTGTACTTCCATAGTTTGGCATTTGCTCAAGAACCTCAATTGCACGATCAACCAGCCCTTTTTGGCACAAGGAATTGATTAATATATTGAACGTTACTTCATTTGGGGGACAATCCTTTCCAACCATCTCAGCTATAAGCTCCCCAGCATCTTCCCATCGTGCAGCTCTGCACAAACCCTTCAACACAGCATTGTAGCTAAAGATATCAGGCTTGCACGGCATGCTTCTAAATAACTGAATGGCAACCTCTACAAGACCTTGTTCAGAAAAGCCATTAAGAAGACTGCTGTATGTGACAATGTCAGGCGTACATCTGTACCTTGGCATTTGCTCAAACACTTGGGTTGCATAGTTGACCAGACCATTTTGGCAAAGCATGTCAATCAGTATATTAAAGGTCATTTCAATTAGAGGGCAATCATCCCTAAACATCTGAGCAATAAGCTCACTAGCATCATGCCATCGTTCAGCTCTACAAAAGCCCTTCAACACAGCATTAAAACCAAGGGCATCAGGCTTACACACCATGCTGTTCAGCAACCTGAGGGCATCATCCACGCGCCCTCGTTCAGACAAGGAATTGATGATTATATTGTAATTGACGGTGTCAGGCTCACACCCGTACTTCTCCATTTGCTCAAGAACTTCGACTGCGCTGTCCACTAAATTATTTTGGCACAAGGAACTGATCAGCATGCTGAATGTAGCTTCGTTTGGCGAGCAACCCTTCCTAACCATCTCAGCCATCAGCTCACCGATATCCTCCCATCGCTCGGCGATGCATAAACCCTTCAACGCAGCATTGTAGCAAACGGTGTTGGGCTTGCATAGCATAGTGTTGAGAAGGTCGAGGGCTTGGTCGACATGCCCTTGCTCTGAGAATCCATTGATAAGGGTGCTGTAAATGACAACGTCAGGAGTGCATCCGTACCTAGGCATTTGGTCGAGCAGTTGGACGGCGCGGTCGAGCAACCCGTTCTGGCAGAAAGAACGGATCTGCGTGGCGAATGTCACCTCGTTGGGAGGGCAACGGTTCCTGATCATCTCTGCCATGAGCTCCTCGGCCTCCTCCCACTTCTTGGCGATGCACAAGCCCTTGAGCACGGTGTTGTAGGTGTAGGTGTCGGGCGCCACGGGCATGGAGGCGATGAGGCGGAGCGCGTCGTCGAGGCGGCCGGAGCGGCAGTACCCGTCGATGAGCGCGGTGTAGGTGACGACGTTGGCCGCGCCGGTCGCCCTGGCCGCGCCGAGCACGCGCTCCGCGTCGGCGAGGCGGCCGTCGCGGCAGTAGCCCGCGACGAGGGTGTTGTGCGAGACGGCGTCCGCGGCGGCGGCCGCCTTGAGCGCGTCGAGCACGCGCTCCGCGTCGGCGAGGCGGCGGGTGGCGCAGAGCTTCTTGATGAGTATGTTGCAGGAGATGAGGGCGGCGGCGGGGGCGGGCAGCGCGCCGGGGAGGAGGAGGAGGCGGAGCGCGGCGTCGAGGTCCCCGAGCTGGACGAGGCGGCGCAGCGTCTGGCCAGGGCGGGGCGGCGCGGCCGGGTTGACCCATATGGAGGAGCTGGCCCTGCGGTTCGCCCACCTGGAGGAGGCGGCGGCGAGGCGGGGGCGCCCGTGTTGCTTGGCGCGGCGAGGGAAAGAGAAGGGGTGGTGGGCGGCGGGCGGCGAGGAGGAGGAGGAGGTGATGGCCATGGTCGTCGGGGTGGTGAAGGATGGAGAAGGCGGAGGCGATAGGATTCGTGGGATGGATGAGGTGGTGCGGCGGGGCCGCGGGAGTGAGAGTGACGACCAAATGCCCGCCAATTCTAC More
CDS seq		ATGGCCATCACCTCCTCCTCCTCCTCGCCGCCCGCCGCCCACCACCCCTTCTCTTTCCCTCGCCGCGCCAAGCAACACGGGCGCCCCCGCCTCGCCGCCGCCTCCTCCAGGTGGGCGAACCGCAGGGCCAGCTCCTCCATATGGGTCAACCCGGCCGCGCCGCCCCGCCCTGGCCAGACGCTGCGCCGCCTCGTCCAGCTCGGGGACCTCGACGCCGCGCTCCGCCTCCTCCTCCTCCCCGGCGCGCTGCCCGCCCCCGCCGCCGCCCTCATCTCCTGCAACATACTCATCAAGAAGCTCTGCGCCACCCGCCGCCTCGCCGACGCGGAGCGCGTGCTCGACGCGCTCAAGGCGGCCGCCGCCGCGGACGCCGTCTCGCACAACACCCTCGTCGCGGGCTACTGCCGCGACGGCCGCCTCGCCGACGCGGAGCGCGTGCTCGGCGCGGCCAGGGCGACCGGCGCGGCCAACGTCGTCACCTACACCGCGCTCATCGACGGGTACTGCCGCTCCGGCCGCCTCGACGACGCGCTCCGCCTCATCGCCTCCATGCCCGTGGCGCCCGACACCTACACCTACAACACCGTGCTCAAGGGCTTGTGCATCGCCAAGAAGTGGGAGGAGGCCGAGGAGCTCATGGCAGAGATGATCAGGAACCGTTGCCCTCCCAACGAGGTGACATTCGCCACGCAGATCCGTTCTTTCTGCCAGAACGGGTTGCTCGACCGCGCCGTCCAACTGCTCGACCAAATGCCTAGGTACGGATGCACTCCTGACGTTGTCATTTACAGCACCCTTATCAATGGATTCTCAGAGCAAGGGCATGTCGACCAAGCCCTCGACCTTCTCAACACTATGCTATGCAAGCCCAACACCGTTTGCTACAATGCTGCGTTGAAGGGTTTATGCATCGCCGAGCGATGGGAGGATATCGGTGAGCTGATGGCTGAGATGGTTAGGAAGGGTTGCTCGCCAAACGAAGCTACATTCAGCATGCTGATCAGTTCCTTGTGCCAAAATAATTTAGTGGACAGCGCAGTCGAAGTTCTTGAGCAAATGGAGAAGTACGGGTGTGAGCCTGACACCGTCAATTACAATATAATCATCAATTCCTTGTCTGAACGAGGGCGCGTGGATGATGCCCTCAGGTTGCTGAACAGCATGGTGTGTAAGCCTGATGCCCTTGGTTTTAATGCTGTGTTGAAGGGCTTTTGTAGAGCTGAACGATGGCATGATGCTAGTGAGCTTATTGCTCAGATGTTTAGGGATGATTGCCCTCTAATTGAAATGACCTTTAATATACTGATTGACATGCTTTGCCAAAATGGTCTGGTCAACTATGCAACCCAAGTGTTTGAGCAAATGCCAAGGTACAGATGTACGCCTGACATTGTCACATACAGCAGTCTTCTTAATGGCTTTTCTGAACAAGGTCTTGTAGAGGTTGCCATTCAGTTATTTAGAAGCATGCCGTGCAAGCCTGATATCTTTAGCTACAATGCTGTGTTGAAGGGTTTGTGCAGAGCTGCACGATGGGAAGATGCTGGGGAGCTTATAGCTGAGATGGTTGGAAAGGATTGTCCCCCAAATGAAGTAACGTTCAATATATTAATCAATTCCTTGTGCCAAAAAGGGCTGGTTGATCGTGCAATTGAGGTTCTTGAGCAAATGCCAAACTATGGAAGTACACCTGATATTTTTACATATAACGCCCTTATCAATGGCTTTTCTGAACAAGGCCGTTTGGACGATGCCCTCAAGTTATTGAGCACCATGTCATGTAAGCCTGATGCTATTTCTTATAACTCTACATTGAAGGGTTTGTGTAGAGCTGAGCGGTGGCAGGATGCAGAGGAGCTTGTAGCTGAGATGCTTAGGAATAAGTGCACTCCAAATGAAGTAACATTCAAGTATGCTAATCATTTACTTATGCCTAACAGGGCTGGTTGA More
Protein seq		MAITSSSSSPPAAHHPFSFPRRAKQHGRPRLAAASSRWANRRASSSIWVNPAAPPRPGQTLRRLVQLGDLDAALRLLLLPGALPAPAAALISCNILIKKLCATRRLADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG
Function		Pentatricopeptide repeat-containing protein At1g09900 [UniProtKB/Swiss-Prot:Q3EDF8]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_02G0266800	OsMH63_02T0266800.1	Chr02	17121112	17124983	-	maker
CDS seq	ATGGCCATCACCTCCTCCTCCTCCTCGCCGCCCGCCGCCCACCACCCCTTCTCTTTCCCTCGCCGCGCCAAGCAACACGGGCGCCCCCGCCTCGCCGCCGCCTCCTCCAGGTGGGCGAACCGCAGGGCCAGCTCCTCCATATGGGTCAACCCGGCCGCGCCGCCCCGCCCTGGCCAGACGCTGCGCCGCCTCGTCCAGCTCGGGGACCTCGACGCCGCGCTCCGCCTCCTCCTCCTCCCCGGCGCGCTGCCCGCCCCCGCCGCCGCCCTCATCTCCTGCAACATACTCATCAAGAAGCTCTGCGCCACCCGCCGCCTCGCCGACGCGGAGCGCGTGCTCGACGCGCTCAAGGCGGCCGCCGCCGCGGACGCCGTCTCGCACAACACCCTCGTCGCGGGCTACTGCCGCGACGGCCGCCTCGCCGACGCGGAGCGCGTGCTCGGCGCGGCCAGGGCGACCGGCGCGGCCAACGTCGTCACCTACACCGCGCTCATCGACGGGTACTGCCGCTCCGGCCGCCTCGACGACGCGCTCCGCCTCATCGCCTCCATGCCCGTGGCGCCCGACACCTACACCTACAACACCGTGCTCAAGGGCTTGTGCATCGCCAAGAAGTGGGAGGAGGCCGAGGAGCTCATGGCAGAGATGATCAGGAACCGTTGCCCTCCCAACGAGGTGACATTCGCCACGCAGATCCGTTCTTTCTGCCAGAACGGGTTGCTCGACCGCGCCGTCCAACTGCTCGACCAAATGCCTAGGTACGGATGCACTCCTGACGTTGTCATTTACAGCACCCTTATCAATGGATTCTCAGAGCAAGGGCATGTCGACCAAGCCCTCGACCTTCTCAACACTATGCTATGCAAGCCCAACACCGTTTGCTACAATGCTGCGTTGAAGGGTTTATGCATCGCCGAGCGATGGGAGGATATCGGTGAGCTGATGGCTGAGATGGTTAGGAAGGGTTGCTCGCCAAACGAAGCTACATTCAGCATGCTGATCAGTTCCTTGTGCCAAAATAATTTAGTGGACAGCGCAGTCGAAGTTCTTGAGCAAATGGAGAAGTACGGGTGTGAGCCTGACACCGTCAATTACAATATAATCATCAATTCCTTGTCTGAACGAGGGCGCGTGGATGATGCCCTCAGGTTGCTGAACAGCATGGTGTGTAAGCCTGATGCCCTTGGTTTTAATGCTGTGTTGAAGGGCTTTTGTAGAGCTGAACGATGGCATGATGCTAGTGAGCTTATTGCTCAGATGTTTAGGGATGATTGCCCTCTAATTGAAATGACCTTTAATATACTGATTGACATGCTTTGCCAAAATGGTCTGGTCAACTATGCAACCCAAGTGTTTGAGCAAATGCCAAGGTACAGATGTACGCCTGACATTGTCACATACAGCAGTCTTCTTAATGGCTTTTCTGAACAAGGTCTTGTAGAGGTTGCCATTCAGTTATTTAGAAGCATGCCGTGCAAGCCTGATATCTTTAGCTACAATGCTGTGTTGAAGGGTTTGTGCAGAGCTGCACGATGGGAAGATGCTGGGGAGCTTATAGCTGAGATGGTTGGAAAGGATTGTCCCCCAAATGAAGTAACGTTCAATATATTAATCAATTCCTTGTGCCAAAAAGGGCTGGTTGATCGTGCAATTGAGGTTCTTGAGCAAATGCCAAACTATGGAAGTACACCTGATATTTTTACATATAACGCCCTTATCAATGGCTTTTCTGAACAAGGCCGTTTGGACGATGCCCTCAAGTTATTGAGCACCATGTCATGTAAGCCTGATGCTATTTCTTATAACTCTACATTGAAGGGTTTGTGTAGAGCTGAGCGGTGGCAGGATGCAGAGGAGCTTGTAGCTGAGATGCTTAGGAATAAGTGCACTCCAAATGAAGTAACATTCAAGTATGCTAATCATTTACTTATGCCTAACAGGGCTGGTTGA More
Protein seq	MAITSSSSSPPAAHHPFSFPRRAKQHGRPRLAAASSRWANRRASSSIWVNPAAPPRPGQTLRRLVQLGDLDAALRLLLLPGALPAPAAALISCNILIKKLCATRRLADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_02G0266800	OsMH63_02T0266800.2	Chr02	17121131	17124983	-	maker
CDS seq	ATGGCCATCACCTCCTCCTCCTCCTCGCCGCCCGCCGCCCACCACCCCTTCTCTTTCCCTCGCCGCGCCAAGCAACACGGGCGCCCCCGCCTCGCCGCCGCCTCCTCCAGGTGGGCGAACCGCAGGGCCAGCTCCTCCATATGGGTCAACCCGGCCGCGCCGCCCCGCCCTGGCCAGACGCTGCGCCGCCTCGTCCAGCTCGGGGACCTCGACGCCGCGCTCCGCCTCCTCCTCCTCCCCGGCGCGCTGCCCGCCCCCGCCGCCGCCCTCATCTCCTGCAACATACTCATCAAGAAGCTCTGCGCCACCCGCCGCCTCGCCGACGCGGAGCGCGTGCTCGACGCGCTCAAGGCGGCCGCCGCCGCGGACGCCGTCTCGCACAACACCCTCGTCGCGGGCTACTGCCGCGACGGCCGCCTCGCCGACGCGGAGCGCGTGCTCGGCGCGGCCAGGGCGACCGGCGCGGCCAACGTCGTCACCTACACCGCGCTCATCGACGGGTACTGCCGCTCCGGCCGCCTCGACGACGCGCTCCGCCTCATCGCCTCCATGCCCGTGGCGCCCGACACCTACACCTACAACACCGTGCTCAAGGGCTTGTGCATCGCCAAGAAGTGGGAGGAGGCCGAGGAGCTCATGGCAGAGATGATCAGGAACCGTTGCCCTCCCAACGAGGTGACATTCGCCACGCAGATCCGTTCTTTCTGCCAGAACGGGTTGCTCGACCGCGCCGTCCAACTGCTCGACCAAATGCCTAGGTACGGATGCACTCCTGACGTTGTCATTTACAGCACCCTTATCAATGGATTCTCAGAGCAAGGGCATGTCGACCAAGCCCTCGACCTTCTCAACACTATGCTATGCAAGCCCAACACCGTTTGCTACAATGCTGCGTTGAAGGGTTTATGCATCGCCGAGCGATGGGAGGATATCGGTGAGCTGATGGCTGAGATGGTTAGGAAGGGTTGCTCGCCAAACGAAGCTACATTCAGCATGCTGATCAGTTCCTTGTGCCAAAATAATTTAGTGGACAGCGCAGTCGAAGTTCTTGAGCAAATGGAGAAGTACGGGTGTGAGCCTGACACCGTCAATTACAATATAATCATCAATTCCTTGTCTGAACGAGGGCGCGTGGATGATGCCCTCAGGTTGCTGAACAGCATGGTGTGTAAGCCTGATGCCCTTGGTTTTAATGCTGTGTTGAAGGGCTTTTGTAGAGCTGAACGATGGCATGATGCTAGTGAGCTTATTGCTCAGATGTTTAGGGATGATTGCCCTCTAATTGAAATGACCTTTAATATACTGATTGACATGCTTTGCCAAAATGGTCTGGTCAACTATGCAACCCAAGTGTTTGAGCAAATGCCAAGGTACAGATGTACGCCTGACATTGTCACATACAGCAGTCTTCTTAATGGCTTTTCTGAACAAGGTCTTGTAGAGGTTGCCATTCAGTTATTTAGAAGCATGCCGTGCAAGCCTGATATCTTTAGCTACAATGCTGTGTTGAAGGGTTTGTGCAGAGCTGCACGATGGGAAGATGCTGGGGAGCTTATAGCTGAGATGGTTGGAAAGGATTGTCCCCCAAATGAAGTAACGTTCAATATATTAATCAATTCCTTGTGCCAAAAAGGGCTGGTTGATCGTGCAATTGAGGTTCTTGAGCAAATGCCAAACTATGGAAGTACACCTGATATTTTTACATATAACGCCCTTATCAATGGCTTTTCTGAACAAGGCCGTTTGGACGATGCCCTCAAGTTATTGAGCACCATGTCATGTAAGCCTGATGCTATTTCTTATAACTCTACATTGAAGGGTTTGTGTAGAGCTGAGCGGTGGCAGGATGCAGAGGAGCTTGTAGCTGAGATGCTTAGGAATAAGTGCACTCCAAATGAAGTAACATTCAAGTATGCTAATCATTTACTTATGCCTAACAGGGCTGGTTGA More
Protein seq	MAITSSSSSPPAAHHPFSFPRRAKQHGRPRLAAASSRWANRRASSSIWVNPAAPPRPGQTLRRLVQLGDLDAALRLLLLPGALPAPAAALISCNILIKKLCATRRLADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	4.643378	3.530575	0.6375225

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_02g0470000	RBH	1.789819	1.541013	1.203457
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os02g27070	RBH	1.237403	1.164744	0.403436
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0470000	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0016670	RBH	0.855444	4.775733	1.922789
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0016790	RBH	0.170548	0.000000	0.622693
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0016680	RBH	1.369899	0.739701	2.086904
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0016560	RBH	0.170675	0.039168	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0016480	RBH	4.289032	0.0	6.488090
Minghui 63 \| MH63RS3 \| HZAU	NA	NA	NA	NA	NA
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0016240	RBH	0.518569	0.160331	0.513170
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_02G0287600	RBH	5.3348105	3.8913525	3.041928
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0016790	RBH	0.255399	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0016340	RBH	0.238493	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0016870	RBH	14.063884	4.519767	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0016660	RBH	1.101206	0.076910	0.633193
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0016410	RBH	0.476081	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G016840	RBH	0.485936	0.000000	0.702869
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0016540	RBH	3.442466	0.000000	1.875720

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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