Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0033200 | OGI:02006710 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:1950638-1955756 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AGGAGTCGAATTGGAAGTCGCCGCGTTGCTTCACCATGTAAGGAGGCGGCGGGAGAGTGTGGCAACACCAGTCGCCGTCGGCGTCGGTGAAGCTCTCCCTACTATAGGTTAGGGCGTGGAAGCAGTGATCATGGCCGCCGGTGAACGGGCCCTGGATGTCGTCGAGGATGTAAAGGTCGTCGTCGCCGATGGTGAGGGACACGGGGGAGAACTTGGGCATGGGGAGGGTGGGCAGGGAGCGGACGACGTGCTCGTCGGGGTCGTACAGGAGGGTGCGCCCCGTCAGGTCGGTGCCGACTATCTTGTTATGCCTTCCACCAAGGAGCATGAACTCCATCGTCTCCATCGGGCAGACCGATGCACGGAAGCTCATCACCGGGCATGGCAGATTGCCGTACTCCACCGCCGCCGCGCCGTCGTGTGCTCCGGCGTCCAGCGGCGTTGCCAATTTACGGGGGAGGAAGAAGCGTGACATGTCCATGCGCCGCACTGTGTAGTTGCCTTGGACCTTATCAAGCACCAGATTCACAAATCGCCGGTAACTCATAACTGATCTTCCTCCTCCAAATTATGAACAGGAATCTACTAGATATGTATATGCACTAGTTGCATATACGATCGATCGATTAGTTGGATTTATCCGAAATTCTTTGTGCTTCGGATGTTAATTGTTCATCTTGTTGATTCCAACACATCGAGGCAGCATGAATATCTGTACCTCGATTTCTCCTTGTACAAAAACCAGAAATAATCCAGCAATTATTACTCACATCTCCCACTGTATTACTACTAGTATAACAATTAGGATCAAAAATTGCGTAGAGTACCTGCGATTTACGAAAAAACCGACTCCGGATTTACTTCTGTCCGCCGGAATCCAGTCGAGTGTTCATCTGGATCCGATCGATATCCACCGGATTTCTCCTACTCCTCCTCCACAACCCGGTTGAATGCAAGCAGATGGAGAAGCGAATCAGGCGTTGGGTTGCGGGGACGGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGATTTTTTATTCTGCTGCGAGGGACAAGGACCAAGACTTATGTTAGGGTTATGTTTGGGCTCGAATGGGCCGAGGGCCGACTAGGCCCATAAAGCGAAGGTTCAAGTTTGTCTCCCATATCCTGATTTTCCTTTTTCAAACCAATCCTGCGATTATTTTTTCCCCCTCCTTTTGCAATGACAAATTGACAGTCCTGCATGTTGATTTCGTCTAGGAGGGTTAACTTGAGAAACGTACCAACAAAAGCAATGGATGCTCCACGCAACTCAGATAAGTTATCCAGACGAGGAGTGGTGATGGTAGTCAACAGGTGGGTGACCAGAAATTAACGTTAACTACAATCATAGCTTAATCCATGCAAATCAACATCTTATCAGCTTTAATTAATTGGCATTATAATGCAAGCTTGCTTGCTCCATATAAATTGGCACAGAGAGAAGAAGGATCAGGAGTGCACCTGGCTTACACTGATCGATGCTGTTCTCAGTTCTCACCACCATTTTTACCTCGAAGATTTCTAGATTCGATCAGCAAACCAATTGGAAGCACAATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGGTATTTTTTTGCAACACTTGTCAGTTGTCACCAAGATTTTGATTTCAGACAAGATGATTTTGATGTGATTTCGTCGCTTGCAGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATGTAAGTGTAAGCTTAGCTTCACTCTCACTTATGCTGCTGGTAATTACTGATTATTAGAATGCTTGACTCTTATTGATGCTGCTGATAATTACCAATGGTTACTCTGAATCTGTAATTTCTGACGAAAGTATCAACCTGACAGAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGTACTGACTTGCACAATGCATTTTTTTCATATCTGATGTCTCTAGTTCTTGTTCTTGCTTTGATCACTGTATGATTGTTGGGACAGGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGTGAGATGCAGGCAGATGTGTTGGTTGAGTTCTTCAGAGATCAGCATCTGTGGACAATTGGTGAAGCTTACTGATGGTTGTTCTTGGATTGTGTTCTGCAGGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTGAACTCGCTTTCGACACTGTGAGTATTATCCTCCTTAATTGTGTGCAGTAATGTTCTTTGTTTATCTCTGAATTTGCAATGTGTCCGCAACTTGTAGGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTAGGAGATCTTCCCCTGAAAGACTTGTAATCACTACATCAATTCACACATGCTCTGTCCAGGAAAAAAAATCACACATATTTACCTTGATGCATTTCTCACCTGATCCTCTCATGATTTACTAATATTTGCAGGGATATAGAGAACAATCTTTTCTCAGGACCAATCCCAGAGAAACTGATCAACATCCCAAAATTTCTGTAAATCTCTCAGCCTTCCTCAAGAACAGTAGAATTTAATCTAGTGGCATCCCAGTCTGACACAACAGTTGGTTCTTGATTGTGTGCAGGAGAAACGGCAACCATCTTACCATCCCCACGATGCCCGGCTCTTCTCCAACTCCGGATACCATCCCCGGCTCTCCTCCGACTCCGGCGGCAGCGGTGGCGGCGCCTCGATCAGGTGCTTCACACCCTCCTATATATGTAATTCCGGCCACTCCACATGGCGCTGCACAGGGTGACCCTCCGAGACACGGCAAGAAGGTCTCGCCGGCGAAAGCCGCCGGATTCAGCATCCTCGCCGCCGGCTCACTGACCATTGCCGTGGTCCTGATCGTCTTCGCCGTGTCGAAACGGCGGCGGGAGACGTCTCTTCATGGAGGATTTCTGAGAGGAGTTGAGATGAGCACTCCGGATTGGAGTGGGAAGCCTTCAGGACAAAGTGCAGTTGTCAAGGTAGACAAAGAACAAAGCACAGGTATATACACCGACTGAAAACTGGAGTATTTCCTATCTTGGGCCCACATGTCAGTGACATATTAAGAGGTCAATCTTAGAACAATTATTAATGCTCAAAAAATTCAGTACATAAAACGCTAGCTTGTGCAGTCATCTCATCTACATTTTAATCATTTTGTTTGTTGTGTTGATCACTGAAGTTGCTGAAGAGAAGGATACCAAGGGTAGCATTTCTTCATATCAGAAGAATGTTCAGGAGAGTTTACAAAACCATCCTTTGCAATTCAAGTTCACAATCTTCACAGTTGCATCCTTGCAACAGTATACCAACAGTTTCAGTGAGCAGAATCTGATGAGGCAAACCCTGTTCGGAAAAATCTACCTAGCAGAGCAGCAAGACATCAAGGTATCTAATCAACTGTACCCTGAAATCTCCATTCCATTCCTACATGGATTGAACAAGTTTATTTCTTGATCAGTTGTAATCAAGATCTTGTCATTTCATCTCTGATCTCTCTACACCTTATACTAGTTTGCAGTACTGAAGCTTGACGAAGCGATGGCGAGAATGCCGGTGGACGAGTTCTTGAGGATGGTTCAGAGAATCTCTGAACTCCAGCATCCCAACATCGAGGAGCTTGCAGGATGCTGCGTCGAGCACGGACAGAGGCTGCTCGTCTACAAGCATTTCAGCGATGAAACTCTCGACGACATGATCCATCTGAAGAAACTGGCATCATCAGACGATCCTGCTGCCAAGATCACTCTTCCATGGGATGCCCGGGTAGCTGTCGCACTCGAAGCTGCGAAAGCTCTAGAGTACGCCATTGCCATGATCATCTTCAATTTGCTGAATAATTCGAGTGTTTGTCTTGCTGGCTTCTGAATCTGAAGTGAGTAATCGGTAATCGCTTCTGCCATTGCTGTTCTTGCGTTAGGTACCTCCACGAAGGTGGTCAGAGACAGGTTGTGCACCAGCATTTCAGGCCTGAACATGTGCTCGTCGACGGCGAGATGCGTGTGCGCGTGTCCGGCTGCGGCCTTGCTGCGGCTGTGAAATCCGGCTTGGATCTTCAGGTAATCGTTTCGTAGACACCGCTTGATCGATCAGCTTGTTCTTGGATGTGCATCTGATCGATCGGTGTCGATTTGAGCAGTCGGAATGCTGGCTCGACGCGCTGAGCTACGAGCCACCGGAGGCGGCGGCGGCGCCATGGACGGACAAGGGCGACGTGTACAGCTTCGGGGTGGTGATGCTGCAGCTTCTGACGGGGCGGAGGCCTTACGACGGCGCGCGGCCGCGGGGCGAGAGGCGGCTGGTGGCGTGGGCGAGCTCGCGGCTGCACGACCTGACGGCGCTGGAGAAGATGGCCGACCCGCGCCTCGGGACGCCGGCGACGGTCAGGTCCATGTCGCGGTTCGCCGACGTCATCAGCCGGTGCACGCAGCAGGAAGCGGAGTTCCGGCCGGCCATGTCGCAGGTGGTGCAGGATCTGCGGCGCGCGCTGCAGCCTGCACGCGATGCTTGCGGACAGCAGAGCTGCAGCAACTGATTAGTGACGAAAATTTACTAATCCCGCAGTTCCGAAAAAATATATATAACACCATATAAGACATACTCTAATGCCCTATATTTATGCCACTATCTTGTGTTAAATCTATTATATTTTGGAACGAAGGTTGTAGTAATATTTGTCATCCTCCTGATTTGCGTGGGTTCGATTTAAAGTTTTAGACAGCGAAATACCATCAGAAAATAGATGGAAAAGTGGAATACCAACGGAATACAAAGGGAGGAAGGGGCAGTTCAAATTGATGTCATTTTCAACCATATCTTTTTTTTTGCAAAGTTGCCAAATTTGATAAATACATAAGAAATC
More
|
||||||||||
| CDS seq | ATGGTAGTCAACAGCTTGCTTGCTCCATATAAATTGGCACAGAGAGAAGAAGGATCAGGAGTGCACCTGGCTTACACTGATCGATGCTGTTCTCAGTTCTCACCACCATTTTTACCTCGAAGATTTCTAGATTCGATCAGCAAACCAATTGGAAGCACAATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTGAACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTAGGAGATCTTCCCCTGAAAGACTTGGATATAGAGAACAATCTTTTCTCAGGACCAATCCCAGAGAAACTGATCAACATCCCAAAATTTCTGAGAAACGGCAACCATCTTACCATCCCCACGATGCCCGGCTCTTCTCCAACTCCGGATACCATCCCCGGCTCTCCTCCGACTCCGGCGGCAGCGGTGGCGGCGCCTCGATCAGGTGCTTCACACCCTCCTATATATGTAATTCCGGCCACTCCACATGGCGCTGCACAGGGTGACCCTCCGAGACACGGCAAGAAGGTCTCGCCGGCGAAAGCCGCCGGATTCAGCATCCTCGCCGCCGGCTCACTGACCATTGCCGTGGTCCTGATCGTCTTCGCCGTGTCGAAACGGCGGCGGGAGACGTCTCTTCATGGAGGATTTCTGAGAGGAGTTGAGATGAGCACTCCGGATTGGAGTGGGAAGCCTTCAGGACAAAGTGCAGTTGTCAAGGTAGACAAAGAACAAAGCACAGTTGCTGAAGAGAAGGATACCAAGGGTAGCATTTCTTCATATCAGAAGAATGTTCAGGAGAGTTTACAAAACCATCCTTTGCAATTCAAGTTCACAATCTTCACAGTTGCATCCTTGCAACAGTATACCAACAGTTTCAGTGAGCAGAATCTGATGAGGCAAACCCTGTTCGGAAAAATCTACCTAGCAGAGCAGCAAGACATCAAGTTTGCAGTACTGAAGCTTGACGAAGCGATGGCGAGAATGCCGGTGGACGAGTTCTTGAGGATGGTTCAGAGAATCTCTGAACTCCAGCATCCCAACATCGAGGAGCTTGCAGGATGCTGCGTCGAGCACGGACAGAGGCTGCTCGTCTACAAGCATTTCAGCGATGAAACTCTCGACGACATGATCCATCTGAAGAAACTGGCATCATCAGACGATCCTGCTGCCAAGATCACTCTTCCATGGGATGCCCGGGTAGCTGTCGCACTCGAAGCTGCGAAAGCTCTAGAGTACCTCCACGAAGGTGGTCAGAGACAGGTTGTGCACCAGCATTTCAGGCCTGAACATGTGCTCGTCGACGGCGAGATGCGTGTGCGCGTGTCCGGCTGCGGCCTTGCTGCGGCTGTGAAATCCGGCTTGGATCTTCAGTCGGAATGCTGGCTCGACGCGCTGAGCTACGAGCCACCGGAGGCGGCGGCGGCGCCATGGACGGACAAGGGCGACGTGTACAGCTTCGGGGTGGTGATGCTGCAGCTTCTGACGGGGCGGAGGCCTTACGACGGCGCGCGGCCGCGGGGCGAGAGGCGGCTGGTGGCGTGGGCGAGCTCGCGGCTGCACGACCTGACGGCGCTGGAGAAGATGGCCGACCCGCGCCTCGGGACGCCGGCGACGGTCAGGTCCATGTCGCGGTTCGCCGACGTCATCAGCCGGTGCACGCAGCAGGAAGCGGAGTTCCGGCCGGCCATGTCGCAGGTGGTGCAGGATCTGCGGCGCGCGCTGCAGCCTGCACGCGATGCTTGCGGACAGCAGAGCTGCAGCAACTGA
More
|
||||||||||
| Protein seq | MVVNSLLAPYKLAQREEGSGVHLAYTDRCCSQFSPPFLPRRFLDSISKPIGSTMQFRLVILVLLLSCSLQLLRAFPFPIPFFGPFTSPQDVDAINELYASLGSPDLHGWASSGGDPCMEAWQGVQCLGPNITAIELRGAGLGGKLSETLGKFTAMTALDLSSNRIGGVIPESLPPAVKQLNLSSNSLSGKLPDSMAKLNSLSTLHVQNNQLTGTLDVLGDLPLKDLDIENNLFSGPIPEKLINIPKFLRNGNHLTIPTMPGSSPTPDTIPGSPPTPAAAVAAPRSGASHPPIYVIPATPHGAAQGDPPRHGKKVSPAKAAGFSILAAGSLTIAVVLIVFAVSKRRRETSLHGGFLRGVEMSTPDWSGKPSGQSAVVKVDKEQSTVAEEKDTKGSISSYQKNVQESLQNHPLQFKFTIFTVASLQQYTNSFSEQNLMRQTLFGKIYLAEQQDIKFAVLKLDEAMARMPVDEFLRMVQRISELQHPNIEELAGCCVEHGQRLLVYKHFSDETLDDMIHLKKLASSDDPAAKITLPWDARVAVALEAAKALEYLHEGGQRQVVHQHFRPEHVLVDGEMRVRVSGCGLAAAVKSGLDLQSECWLDALSYEPPEAAAAPWTDKGDVYSFGVVMLQLLTGRRPYDGARPRGERRLVAWASSRLHDLTALEKMADPRLGTPATVRSMSRFADVISRCTQQEAEFRPAMSQVVQDLRRALQPARDACGQQSCSN |
||||||||||
| Function | Protein STRUBBELIG-RECEPTOR FAMILY 1 [UniProtKB/Swiss-Prot:Q06BH3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0033200 | OsMH63_02T0033200.1 | Chr02 | 1950638 | 1955756 | + | maker | ||
| CDS seq | ATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTGAACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTAGGAGATCTTCCCCTGAAAGACTTGGATATAGAGAACAATCTTTTCTCAGGACCAATCCCAGAGAAACTGATCAACATCCCAAAATTTCTGAGAAACGGCAACCATCTTACCATCCCCACGATGCCCGGCTCTTCTCCAACTCCGGATACCATCCCCGGCTCTCCTCCGACTCCGGCGGCAGCGGTGGCGGCGCCTCGATCAGGTGCTTCACACCCTCCTATATATGTAATTCCGGCCACTCCACATGGCGCTGCACAGGGTGACCCTCCGAGACACGGCAAGAAGGTCTCGCCGGCGAAAGCCGCCGGATTCAGCATCCTCGCCGCCGGCTCACTGACCATTGCCGTGGTCCTGATCGTCTTCGCCGTGTCGAAACGGCGGCGGGAGACGTCTCTTCATGGAGGATTTCTGAGAGGAGTTGAGATGAGCACTCCGGATTGGAGTGGGAAGCCTTCAGGACAAAGTGCAGTTGTCAAGGTAGACAAAGAACAAAGCACAGTTGCTGAAGAGAAGGATACCAAGGGTAGCATTTCTTCATATCAGAAGAATGTTCAGGAGAGTTTACAAAACCATCCTTTGCAATTCAAGTTCACAATCTTCACAGTTGCATCCTTGCAACAGTATACCAACAGTTTCAGTGAGCAGAATCTGATGAGGCAAACCCTGTTCGGAAAAATCTACCTAGCAGAGCAGCAAGACATCAAGTTTGCAGTACTGAAGCTTGACGAAGCGATGGCGAGAATGCCGGTGGACGAGTTCTTGAGGATGGTTCAGAGAATCTCTGAACTCCAGCATCCCAACATCGAGGAGCTTGCAGGATGCTGCGTCGAGCACGGACAGAGGCTGCTCGTCTACAAGCATTTCAGCGATGAAACTCTCGACGACATGATCCATCTGAAGAAACTGGCATCATCAGACGATCCTGCTGCCAAGATCACTCTTCCATGGGATGCCCGGGTAGCTGTCGCACTCGAAGCTGCGAAAGCTCTAGAGTACCTCCACGAAGGTGGTCAGAGACAGGTTGTGCACCAGCATTTCAGGCCTGAACATGTGCTCGTCGACGGCGAGATGCGTGTGCGCGTGTCCGGCTGCGGCCTTGCTGCGGCTGTGAAATCCGGCTTGGATCTTCAGTCGGAATGCTGGCTCGACGCGCTGAGCTACGAGCCACCGGAGGCGGCGGCGGCGCCATGGACGGACAAGGGCGACGTGTACAGCTTCGGGGTGGTGATGCTGCAGCTTCTGACGGGGCGGAGGCCTTACGACGGCGCGCGGCCGCGGGGCGAGAGGCGGCTGGTGGCGTGGGCGAGCTCGCGGCTGCACGACCTGACGGCGCTGGAGAAGATGGCCGACCCGCGCCTCGGGACGCCGGCGACGGTCAGGTCCATGTCGCGGTTCGCCGACGTCATCAGCCGGTGCACGCAGCAGGAAGCGGAGTTCCGGCCGGCCATGTCGCAGGTGGTGCAGGATCTGCGGCGCGCGCTGCAGCCTGCACGCGATGCTTGCGGACAGCAGAGCTGCAGCAACTGA
More
|
|||||||
| Protein seq | MQFRLVILVLLLSCSLQLLRAFPFPIPFFGPFTSPQDVDAINELYASLGSPDLHGWASSGGDPCMEAWQGVQCLGPNITAIELRGAGLGGKLSETLGKFTAMTALDLSSNRIGGVIPESLPPAVKQLNLSSNSLSGKLPDSMAKLNSLSTLHVQNNQLTGTLDVLGDLPLKDLDIENNLFSGPIPEKLINIPKFLRNGNHLTIPTMPGSSPTPDTIPGSPPTPAAAVAAPRSGASHPPIYVIPATPHGAAQGDPPRHGKKVSPAKAAGFSILAAGSLTIAVVLIVFAVSKRRRETSLHGGFLRGVEMSTPDWSGKPSGQSAVVKVDKEQSTVAEEKDTKGSISSYQKNVQESLQNHPLQFKFTIFTVASLQQYTNSFSEQNLMRQTLFGKIYLAEQQDIKFAVLKLDEAMARMPVDEFLRMVQRISELQHPNIEELAGCCVEHGQRLLVYKHFSDETLDDMIHLKKLASSDDPAAKITLPWDARVAVALEAAKALEYLHEGGQRQVVHQHFRPEHVLVDGEMRVRVSGCGLAAAVKSGLDLQSECWLDALSYEPPEAAAAPWTDKGDVYSFGVVMLQLLTGRRPYDGARPRGERRLVAWASSRLHDLTALEKMADPRLGTPATVRSMSRFADVISRCTQQEAEFRPAMSQVVQDLRRALQPARDACGQQSCSN
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0033200 | OsMH63_02T0033200.2 | Chr02 | 1951958 | 1955756 | + | maker | ||
| CDS seq | ATGGTAGTCAACAGCTTGCTTGCTCCATATAAATTGGCACAGAGAGAAGAAGGATCAGGAGTGCACCTGGCTTACACTGATCGATGCTGTTCTCAGTTCTCACCACCATTTTTACCTCGAAGATTTCTAGATTCGATCAGCAAACCAATTGGAAGCACAATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTGAACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTAGGAGATCTTCCCCTGAAAGACTTGGATATAGAGAACAATCTTTTCTCAGGACCAATCCCAGAGAAACTGATCAACATCCCAAAATTTCTGAGAAACGGCAACCATCTTACCATCCCCACGATGCCCGGCTCTTCTCCAACTCCGGATACCATCCCCGGCTCTCCTCCGACTCCGGCGGCAGCGGTGGCGGCGCCTCGATCAGGTGCTTCACACCCTCCTATATATGTAATTCCGGCCACTCCACATGGCGCTGCACAGGGTGACCCTCCGAGACACGGCAAGAAGGTCTCGCCGGCGAAAGCCGCCGGATTCAGCATCCTCGCCGCCGGCTCACTGACCATTGCCGTGGTCCTGATCGTCTTCGCCGTGTCGAAACGGCGGCGGGAGACGTCTCTTCATGGAGGATTTCTGAGAGGAGTTGAGATGAGCACTCCGGATTGGAGTGGGAAGCCTTCAGGACAAAGTGCAGTTGTCAAGGTAGACAAAGAACAAAGCACAGTTGCTGAAGAGAAGGATACCAAGGGTAGCATTTCTTCATATCAGAAGAATGTTCAGGAGAGTTTACAAAACCATCCTTTGCAATTCAAGTTCACAATCTTCACAGTTGCATCCTTGCAACAGTATACCAACAGTTTCAGTGAGCAGAATCTGATGAGGCAAACCCTGTTCGGAAAAATCTACCTAGCAGAGCAGCAAGACATCAAGTTTGCAGTACTGAAGCTTGACGAAGCGATGGCGAGAATGCCGGTGGACGAGTTCTTGAGGATGGTTCAGAGAATCTCTGAACTCCAGCATCCCAACATCGAGGAGCTTGCAGGATGCTGCGTCGAGCACGGACAGAGGCTGCTCGTCTACAAGCATTTCAGCGATGAAACTCTCGACGACATGATCCATCTGAAGAAACTGGCATCATCAGACGATCCTGCTGCCAAGATCACTCTTCCATGGGATGCCCGGGTAGCTGTCGCACTCGAAGCTGCGAAAGCTCTAGAGTACCTCCACGAAGGTGGTCAGAGACAGGTTGTGCACCAGCATTTCAGGCCTGAACATGTGCTCGTCGACGGCGAGATGCGTGTGCGCGTGTCCGGCTGCGGCCTTGCTGCGGCTGTGAAATCCGGCTTGGATCTTCAGTCGGAATGCTGGCTCGACGCGCTGAGCTACGAGCCACCGGAGGCGGCGGCGGCGCCATGGACGGACAAGGGCGACGTGTACAGCTTCGGGGTGGTGATGCTGCAGCTTCTGACGGGGCGGAGGCCTTACGACGGCGCGCGGCCGCGGGGCGAGAGGCGGCTGGTGGCGTGGGCGAGCTCGCGGCTGCACGACCTGACGGCGCTGGAGAAGATGGCCGACCCGCGCCTCGGGACGCCGGCGACGGTCAGGTCCATGTCGCGGTTCGCCGACGTCATCAGCCGGTGCACGCAGCAGGAAGCGGAGTTCCGGCCGGCCATGTCGCAGGTGGTGCAGGATCTGCGGCGCGCGCTGCAGCCTGCACGCGATGCTTGCGGACAGCAGAGCTGCAGCAACTGA
More
|
|||||||
| Protein seq | MVVNSLLAPYKLAQREEGSGVHLAYTDRCCSQFSPPFLPRRFLDSISKPIGSTMQFRLVILVLLLSCSLQLLRAFPFPIPFFGPFTSPQDVDAINELYASLGSPDLHGWASSGGDPCMEAWQGVQCLGPNITAIELRGAGLGGKLSETLGKFTAMTALDLSSNRIGGVIPESLPPAVKQLNLSSNSLSGKLPDSMAKLNSLSTLHVQNNQLTGTLDVLGDLPLKDLDIENNLFSGPIPEKLINIPKFLRNGNHLTIPTMPGSSPTPDTIPGSPPTPAAAVAAPRSGASHPPIYVIPATPHGAAQGDPPRHGKKVSPAKAAGFSILAAGSLTIAVVLIVFAVSKRRRETSLHGGFLRGVEMSTPDWSGKPSGQSAVVKVDKEQSTVAEEKDTKGSISSYQKNVQESLQNHPLQFKFTIFTVASLQQYTNSFSEQNLMRQTLFGKIYLAEQQDIKFAVLKLDEAMARMPVDEFLRMVQRISELQHPNIEELAGCCVEHGQRLLVYKHFSDETLDDMIHLKKLASSDDPAAKITLPWDARVAVALEAAKALEYLHEGGQRQVVHQHFRPEHVLVDGEMRVRVSGCGLAAAVKSGLDLQSECWLDALSYEPPEAAAAPWTDKGDVYSFGVVMLQLLTGRRPYDGARPRGERRLVAWASSRLHDLTALEKMADPRLGTPATVRSMSRFADVISRCTQQEAEFRPAMSQVVQDLRRALQPARDACGQQSCSN
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0033200 | OsMH63_02T0033200.3 | Chr02 | 1950638 | 1955756 | + | maker | ||
| CDS seq | ATGCAGTTCAGGCTGGTGATCTTGGTTCTGCTCCTCTCCTGCTCGCTTCAGCTGCTTCGCGCGTTTCCATTCCCCATCCCGTTCTTTGGCCCCTTCACGAGCCCACAAGACGTTGATGCGATAAACGAGCTGTACGCGTCGCTGGGCTCGCCTGACCTCCATGGCTGGGCTTCTTCAGGAGGAGACCCCTGCATGGAAGCATGGCAGGGGGTGCAATGCCTTGGACCCAACATCACTGCAATAGAGCTCAGAGGTGCAGGCCTGGGAGGAAAGCTGAGTGAGACGCTGGGGAAGTTCACTGCCATGACAGCATTGGATCTGAGCAGCAACCGCATTGGGGGAGTGATTCCTGAGAGCTTACCACCTGCAGTAAAACAACTGAATTTATCTTCGAATAGTCTCAGTGGCAAACTCCCAGATTCGATGGCGAAGCTGAACTCGCTTTCGACACTGCATGTTCAGAACAATCAGCTCACTGGCACACTTGATGTTCTAGGAGATCTTCCCCTGAAAGACTTGGATATAGAGAACAATCTTTTCTCAGGACCAATCCCAGAGAAACTGATCAACATCCCAAAATTTCTGAGAAACGGCAACCATCTTACCATCCCCACGATGCCCGGCTCTTCTCCAACTCCGGATACCATCCCCGGCTCTCCTCCGACTCCGGCGGCAGCGGTGGCGGCGCCTCGATCAGGTGCTTCACACCCTCCTATATATGTAATTCCGGCCACTCCACATGGCGCTGCACAGGGTGACCCTCCGAGACACGGCAAGAAGGTCTCGCCGGCGAAAGCCGCCGGATTCAGCATCCTCGCCGCCGGCTCACTGACCATTGCCGTGGTCCTGATCGTCTTCGCCGTGTCGAAACGGCGGCGGGAGACGTCTCTTCATGGAGGATTTCTGAGAGGAGTTGAGATGAGCACTCCGGATTGGAGTGGGAAGCCTTCAGGACAAAGTGCAGTTGTCAAGGTAGACAAAGAACAAAGCACAGTTGCTGAAGAGAAGGATACCAAGGGTAGCATTTCTTCATATCAGAAGAATGTTCAGGAGAGTTTACAAAACCATCCTTTGCAATTCAAGTTCACAATCTTCACAGTTGCATCCTTGCAACAGTATACCAACAGTTTCAGTGAGCAGAATCTGATGAGGCAAACCCTGTTCGGAAAAATCTACCTAGCAGAGCAGCAAGACATCAAGTTTGCAGTACTGAAGCTTGACGAAGCGATGGCGAGAATGCCGGTGGACGAGTTCTTGAGGATGGTTCAGAGAATCTCTGAACTCCAGCATCCCAACATCGAGGAGCTTGCAGGATGCTGCGTCGAGCACGGACAGAGGCTGCTCGTCTACAAGCATTTCAGCGATGAAACTCTCGACGACATGATCCATCTGAAGAAACTGGCATCATCAGACGATCCTGCTGCCAAGATCACTCTTCCATGGGATGCCCGGGTAGCTGTCGCACTCGAAGCTGCGAAAGCTCTAGAGTACGCCATTGCCATGATCATCTTCAATTTGCTGAATAATTCGAGTGTTTGTCTTGCTGGCTTCTGA
More
|
|||||||
| Protein seq | MQFRLVILVLLLSCSLQLLRAFPFPIPFFGPFTSPQDVDAINELYASLGSPDLHGWASSGGDPCMEAWQGVQCLGPNITAIELRGAGLGGKLSETLGKFTAMTALDLSSNRIGGVIPESLPPAVKQLNLSSNSLSGKLPDSMAKLNSLSTLHVQNNQLTGTLDVLGDLPLKDLDIENNLFSGPIPEKLINIPKFLRNGNHLTIPTMPGSSPTPDTIPGSPPTPAAAVAAPRSGASHPPIYVIPATPHGAAQGDPPRHGKKVSPAKAAGFSILAAGSLTIAVVLIVFAVSKRRRETSLHGGFLRGVEMSTPDWSGKPSGQSAVVKVDKEQSTVAEEKDTKGSISSYQKNVQESLQNHPLQFKFTIFTVASLQQYTNSFSEQNLMRQTLFGKIYLAEQQDIKFAVLKLDEAMARMPVDEFLRMVQRISELQHPNIEELAGCCVEHGQRLLVYKHFSDETLDDMIHLKKLASSDDPAAKITLPWDARVAVALEAAKALEYAIAMIIFNLLNNSSVCLAGF
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.8676095 | 1.62432 | 0.2837155 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0136900 | RBH | 0.102624 | 0.000000 | 0.250827 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g04430 | RBH | 0.069400 | 0.000000 | 0.064568 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0136900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0002870 | RBH | 0.0 | 0.000000 | 0.166305 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0002950 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0002890 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0002860 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0002890 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0034100 | SBH | 0.3469805 | 1.568783 | 0.806957 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0002800 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0034200 | RBH | 0.816869 | 1.75368 | 1.23817 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0002870 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0002800 | RBH | 0.0 | 1.894981 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0002870 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0002960 | RBH | 0.104849 | 0.119643 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0002920 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G002900 | RBH | 0.0 | 0.0 | 0.403689 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0002850 | RBH | 0.0 | 0.0 | 0.0 |
