Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0013300 | OGI:02003450 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:749760-751868 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGCTCAGTTCCATAGTACCATTTTCATATCAATTACAGCTGGAGTATTTTGAGTGCATGAATTGCGAATACATCCAGAGGTATAACGTTTTTTCGAACATCAATTATTAGTGACAAGTAATCACTCTATTCCTCAAAATTATTCAAATGAGCAACTGGAGAATTCATCAAACTTACTCGATCCAACAATAAAACTTTTTCTTTCAGTTGGGTATTGTGCTACTACTACTTGAGAATTACAAGCTCACATTTACACAGACAAATGGTTACACTTTTTTTATTGCAGAAACAACCAAAGAATATGTCCAGCCTAGGGTGTGCTTAACTTCTACTACATCACATTTTTTCTTACAAAAGAGAAGAATCAAATTAATGAAGCAGTATACCGCAATTTCTTTCGATGCTTTTACGCTCAATGCACACAAAACACACGAACTCGATCGATCATATCACACACAATCGTCATCAGAAGAGCAGATCGTCACTAGTGGCAGCAAATCCGCCATAGATGTCTCCCATGTTTAGCAGGTCAAAGTAGCCGCCGCCTCCTGCCATTGGAGCAGCAGCAGCTGAGCTCTGATGCTGCTGCTGCAATGCGCCGTAGCTGCCGCTCATCTGGTCCCCGAACGCGCCGCCGTGCGACGGCGTCACGTTGCCGGAGCTCGCCGTGGACGCCGGCCAGTGCTGCGCCGAGATGGAGTAGCTCTCCTGCCCCGCCGCCGCCGCAGACATCGGCATCCAGTCGCCGGTGAAGACGAAGCTCTTGGGCTGCTGATCAAATGGCTCAGCGACAGGTGCAGGAGCAGAGATGCCGCCATGGCTGCCGCCGCTGCTCAGGTTGGCGTCTTGGTCATGGGAGGTGGTCGTGCTGCCGCTGCTGTTCTTGATCTGATGATGGTGAGGGTGATGATGATGGTGATGCAATGATGGTGGCTCGGTGGTGCTCATGGAGGTGACCTCAGCTGCTGCTGCTGCTAGATTGTTAGGGATGGAGCCCTGTGCCTGCATCACCCTCTTCTTGAGGTAGGAATTCCAGTAGTTCTTCACCTCGTTGTCCGTCCTCCCAGGCAGATGCATCGCAATCTGTGACCACCTGATCATAAATTTCTCAAAACAATCAGCATCATGTAGATGAAATGGAACAATTGAAAATGCTCAATTTTGTTATTCTGTGACAGCTTGAGCTTTGTTATTTTTTAACTTAAAAGACGATGTTTTGTCTGAATTTCAAGGTAAAGTTCAGCTACAAGTTAGAACTAGCTTGGTTTTGTATCATCCTGTTCATAGAGATTGTCAGGTGTGAGGATTACTTGTTGCCCAGCTTGGCCTGAAGATTGATGACAATGTCCTCCTCCTCCTGAGAGAACATTCCACGCTTCAATCCTGGCCGAAGGTAGTTGATCCAACGCAGCCGGCAGCTCTTGCCATTTCTCTGCAAACCTTTTGGAAATAAAAAGGAGAGAAAAAAGGGTCAGAAATAATAGCAGTGAATGAGACAAAGATTTCATTTTTATTTAAGAACAAGTGAACAACTGATGAACTTTAGAGAGCTAGACTCTATGTACTGTAATGCTTTTGTTATTATTTTGGAAAAAAAAAAGGGTGAGAATTCTTCCTTGGCTGGAATTTCAACTGGCCTAAGAATTGTGCTCAAGCTAAGTACTCTCTGTAACTGCTAATTACCAATTAGAGAGGAGACTAGACTAGGCTAGAATTCACAATTGTGAAGAGGGATGCATTGGTGAATGCAGCAATGTGCATTCACAGTAGAGACAGAGAGAAGCAAAAAGCTCACCAGCCTTTGCAGGGACAGCACTCCAGCAGCCAAGGCCATGCTTGACAATGTAGTCCCTCAGCCTCTGGTCCTCCTCAGGAGACCACAGCCCCTTCCTGTAGTTCATCTTCGGCTTGTCGCAGGACCGGCACCCCATTGCTCTCTTCTTTCCTTCTCTGAATATCTCCTCCTGTTCTTCCTCCTGCAACCTGTATGTTGGTCTTGTCTCAATATGAGCTGTTGCAGTAGCAGAGTTGTGCCAGTCCTTTCAGCACCATGTGACCCCTTGTCATTTAAAGGGGGTTCTCACATTTTGGTGTTAATTAGTTTAATTGG
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| CDS seq | ATGGGGTGCCGGTCCTGCGACAAGCCGAAGATGAACTACAGGAAGGGGCTGTGGTCTCCTGAGGAGGACCAGAGGCTGAGGGACTACATTGTCAAGCATGGCCTTGGCTGCTGGAGTGCTGTCCCTGCAAAGGCTGGTTTGCAGAGAAATGGCAAGAGCTGCCGGCTGCGTTGGATCAACTACCTTCGGCCAGGATTGAAGCGTGGAATGTTCTCTCAGGAGGAGGAGGACATTGTCATCAATCTTCAGGCCAAGCTGGGCAACAAGTGGTCACAGATTGCGATGCATCTGCCTGGGAGGACGGACAACGAGGTGAAGAACTACTGGAATTCCTACCTCAAGAAGAGGGTGATGCAGGCACAGGGCTCCATCCCTAACAATCTAGCAGCAGCAGCAGCTGAGGTCACCTCCATGAGCACCACCGAGCCACCATCATTGCATCACCATCATCATCACCCTCACCATCATCAGATCAAGAACAGCAGCGGCAGCACGACCACCTCCCATGACCAAGACGCCAACCTGAGCAGCGGCGGCAGCCATGGCGGCATCTCTGCTCCTGCACCTGTCGCTGAGCCATTTGATCAGCAGCCCAAGAGCTTCGTCTTCACCGGCGACTGGATGCCGATGTCTGCGGCGGCGGCGGGGCAGGAGAGCTACTCCATCTCGGCGCAGCACTGGCCGGCGTCCACGGCGAGCTCCGGCAACGTGACGCCGTCGCACGGCGGCGCGTTCGGGGACCAGATGAGCGGCAGCTACGGCGCATTGCAGCAGCAGCATCAGAGCTCAGCTGCTGCTGCTCCAATGGCAGGAGGCGGCGGCTACTTTGACCTGCTAAACATGGGAGACATCTATGGCGGATTTGCTGCCACTAGTGACGATCTGCTCTTCTGA
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| Protein seq | MGCRSCDKPKMNYRKGLWSPEEDQRLRDYIVKHGLGCWSAVPAKAGLQRNGKSCRLRWINYLRPGLKRGMFSQEEEDIVINLQAKLGNKWSQIAMHLPGRTDNEVKNYWNSYLKKRVMQAQGSIPNNLAAAAAEVTSMSTTEPPSLHHHHHHPHHHQIKNSSGSTTTSHDQDANLSSGGSHGGISAPAPVAEPFDQQPKSFVFTGDWMPMSAAAAGQESYSISAQHWPASTASSGNVTPSHGGAFGDQMSGSYGALQQQHQSSAAAAPMAGGGGYFDLLNMGDIYGGFAATSDDLLF |
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| Function | Transcription factor MYB86 [UniProtKB/Swiss-Prot:Q8LPH6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0013300 | OsMH63_02T0013300.1 | Chr02 | 749760 | 751868 | - | maker | ||
| CDS seq | ATGGGGTGCCGGTCCTGCGACAAGCCGAAGATGAACTACAGGAAGGGGCTGTGGTCTCCTGAGGAGGACCAGAGGCTGAGGGACTACATTGTCAAGCATGGCCTTGGCTGCTGGAGTGCTGTCCCTGCAAAGGCTGGTTTGCAGAGAAATGGCAAGAGCTGCCGGCTGCGTTGGATCAACTACCTTCGGCCAGGATTGAAGCGTGGAATGTTCTCTCAGGAGGAGGAGGACATTGTCATCAATCTTCAGGCCAAGCTGGGCAACAAGTGGTCACAGATTGCGATGCATCTGCCTGGGAGGACGGACAACGAGGTGAAGAACTACTGGAATTCCTACCTCAAGAAGAGGGTGATGCAGGCACAGGGCTCCATCCCTAACAATCTAGCAGCAGCAGCAGCTGAGGTCACCTCCATGAGCACCACCGAGCCACCATCATTGCATCACCATCATCATCACCCTCACCATCATCAGATCAAGAACAGCAGCGGCAGCACGACCACCTCCCATGACCAAGACGCCAACCTGAGCAGCGGCGGCAGCCATGGCGGCATCTCTGCTCCTGCACCTGTCGCTGAGCCATTTGATCAGCAGCCCAAGAGCTTCGTCTTCACCGGCGACTGGATGCCGATGTCTGCGGCGGCGGCGGGGCAGGAGAGCTACTCCATCTCGGCGCAGCACTGGCCGGCGTCCACGGCGAGCTCCGGCAACGTGACGCCGTCGCACGGCGGCGCGTTCGGGGACCAGATGAGCGGCAGCTACGGCGCATTGCAGCAGCAGCATCAGAGCTCAGCTGCTGCTGCTCCAATGGCAGGAGGCGGCGGCTACTTTGACCTGCTAAACATGGGAGACATCTATGGCGGATTTGCTGCCACTAGTGACGATCTGCTCTTCTGA
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| Protein seq | MGCRSCDKPKMNYRKGLWSPEEDQRLRDYIVKHGLGCWSAVPAKAGLQRNGKSCRLRWINYLRPGLKRGMFSQEEEDIVINLQAKLGNKWSQIAMHLPGRTDNEVKNYWNSYLKKRVMQAQGSIPNNLAAAAAEVTSMSTTEPPSLHHHHHHPHHHQIKNSSGSTTTSHDQDANLSSGGSHGGISAPAPVAEPFDQQPKSFVFTGDWMPMSAAAAGQESYSISAQHWPASTASSGNVTPSHGGAFGDQMSGSYGALQQQHQSSAAAAPMAGGGGYFDLLNMGDIYGGFAATSDDLLF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0013300 | OsMH63_02T0013300.2 | Chr02 | 749760 | 751868 | - | maker | ||
| CDS seq | ATGATCAGGTGGTCACAGATTGCGATGCATCTGCCTGGGAGGACGGACAACGAGGTGAAGAACTACTGGAATTCCTACCTCAAGAAGAGGGTGATGCAGGCACAGGGCTCCATCCCTAACAATCTAGCAGCAGCAGCAGCTGAGGTCACCTCCATGAGCACCACCGAGCCACCATCATTGCATCACCATCATCATCACCCTCACCATCATCAGATCAAGAACAGCAGCGGCAGCACGACCACCTCCCATGACCAAGACGCCAACCTGAGCAGCGGCGGCAGCCATGGCGGCATCTCTGCTCCTGCACCTGTCGCTGAGCCATTTGATCAGCAGCCCAAGAGCTTCGTCTTCACCGGCGACTGGATGCCGATGTCTGCGGCGGCGGCGGGGCAGGAGAGCTACTCCATCTCGGCGCAGCACTGGCCGGCGTCCACGGCGAGCTCCGGCAACGTGACGCCGTCGCACGGCGGCGCGTTCGGGGACCAGATGAGCGGCAGCTACGGCGCATTGCAGCAGCAGCATCAGAGCTCAGCTGCTGCTGCTCCAATGGCAGGAGGCGGCGGCTACTTTGACCTGCTAAACATGGGAGACATCTATGGCGGATTTGCTGCCACTAGTGACGATCTGCTCTTCTGA
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| Protein seq | MIRWSQIAMHLPGRTDNEVKNYWNSYLKKRVMQAQGSIPNNLAAAAAEVTSMSTTEPPSLHHHHHHPHHHQIKNSSGSTTTSHDQDANLSSGGSHGGISAPAPVAEPFDQQPKSFVFTGDWMPMSAAAAGQESYSISAQHWPASTASSGNVTPSHGGAFGDQMSGSYGALQQQHQSSAAAAPMAGGGGYFDLLNMGDIYGGFAATSDDLLF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.048601 | 0.345563 | 0.126195 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0114800 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g02370 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0114800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0001110 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0001160 | RBH | 0.000000 | 9.443568 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0001100 | RBH | 0.000000 | 5.422893 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0001110 | RBH | 0.000000 | 0.482507 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0001110 | RBH | 0.000000 | 12.625149 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0001100 | RBH | 0.000000 | 2.275510 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0013800 | RBH | 0.0255905 | 0 | 0.3498145 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0001120 | RBH | 0.000000 | 0.050214 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0001070 | RBH | 0.000000 | 3.314209 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0001120 | RBH | 0.386800 | 33.652531 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0001140 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0001150 | RBH | 0.000000 | 8.796266 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G001120 | RBH | 0.000000 | 6.559485 | 0.291093 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0001090 | RBH | 0.000000 | 0.000000 | 0.0 |
