Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0672300 | OGI:07010130 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:42743730-42746553 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAGTAAGGTGCCCCTGCGTTGCAATGGGAAATTTTATTAAGTGAAAAGAAATTGAGTGAAAATTTGTTAAACGTACTACCAGAAGCAAGCAGTCAACACATACATTTGTAACTAGTAAGGTGCCCCTGCGTTGCAACGGGAAATTTTATTAAGTGAAGAAATTGAGTGAAAATTTGTTAAACGTACTACCAGAAGCAAGCAGTCAACACATACATTTGTAATATCTCCAAGGGGGGCTGCTCATATACAAACAGATTAGAACGTATTTGGTACGAAACACCTAACAAATTTCTGCATGTGACCATATTACACATCAACCTGAAACAGATGAGGACACAGGAGTAGCCATTTTGGTCGTGGAATCTTGAGATCCATGATCTGAAAGAGTTGAATTAATTCAATAATAATAAGGTGTTGTGTTCAAAAAGTCCAAATTTTGATAACAATAGATGTGTTAATTTATAAAAACCTATTGATTCATCATTCTTCCGCCTTTTGGAATCACGTCTCTTCTTGTTTCTATCTTCCTTTAGCTCTTTTGTTAATGATGTGTGCCTCTCTCTAACACGCTTCCTTTTAGTTCAGCCGTACTGAGATTAGTAACATCTTCATGCATCTTCATGCACATGCCTAATGACAGAAGCGTTATTTTCATTGCCTGCACCACAAAATCAGAATGCTGATGTTAGCCTAAAACAAATATCTCATATATTAAGAAAAGAAAGCCAATATAAGTATGATACCAAATCCAATAGTTGAGGCTCTCTGAATCTTAGATGTAGAGTTCTTGTTGATCTGTTGACAGTTCTCATGGTCTTTTGGAACATTGATTTCACATTGGATAACCGCGGCACGCTTGTTTATCAACTTGGCATTAATCACATTAGTTATATCCACAAAAGGACCTAAAGGAAGAACGTACGTAAAATTAGGAAGCAAAAATATATCAAGTGAGTAATGGATATGACCATGGCTGGATGGATGAAATAATGACCTGGTCTTTTGGACGATGTTGGTGCTGAACCGCCACCATTGCTATCCATTGCATAACTAACTTGTTTAGAAGTTAACCGCAACTTTAGAAAAATCATTGTTCGGTTTCAATTTAGTTCTTCACACCAAAACTGGCACCTAAAACTAAAAATCATACATCATGATGTGGGGATAATGACATGCAAAAGCTACCAGCAAAGTAGATGAGTAGACTGTACTGCAGAAAATGAAGAAAAAAACATGGTGCATGTACTGAAATAGGTAAGATACATTGCAATAATATGGATTTCTGAACTTCAACTAATGTTCAGAATGTGGTTTTCAATACTACAAAATATTCAAGATACCATTCTTATAATAGTATTCAGATTTAATGTCCATGGTGTTGTGCAGCAAATTATAATGTTGTTTGAGTGTCCTTAGACAAATTAGTGCAAGATTTGCAGATTCAAGAATGTACAGGTTAAGAAGTGCAGGCCTTCAAGTTAGTAGTAGTAGATTGCATTCTGTATCTTTGCTACCTAATTAAATTGTACAGATAAATCCTATTCAGGGTAATAGGTTATTTCAGAAATACTTGCCGCAACCAAAATTGTCGTTACTCAATCTATGATGCTAGGATGCCTAGTGATGCAAGCAACACAACATGCATGGATTGGGGATATAACATCAGAACTTCAAACTTATTACATTTTTTTTTAAAAAAAAAAGAAGAGCAGAGTCCAGATTTGAGCTGTTATCTGAACAACTCCACAAACCATACCAAATGTCAAGAATGGATTAAAAAGTCTGATATAATTTTTTTGCAGGGCTCTTAATAGGATTTGAACAATTGAAAAGCCAGCGTGTGCAACAGGAAATGTAAATTCAGTATGAACCCCACAATAGATACAAAGGAAGAATCTGTACATCAACACTCCTGAACATATGTATAGTCTCATTCTATCTGATTCTTTTCCTTTTATTTTCCTGCTGTTGCATTTGTTCCTTTGCCATATTTGCTCTAGTATCTTTGTGTACAAAGAAATATAATAATGAGTGGATTCTAGTCGTTTTTATTTGTGCAAAGAGACAAAAATATGAGTCCCGCAGTAGTTCATCATTAAAAATTTACTGCCCTTTTGAGATCATGCAGAATCACAGTTGTTATGCATGCCAATGATCCTGAAGACGCAGATGAAGTTATTACTATGCTTTGCCTGAGAGCCTGACAGCTAATCTCTAGGTACGCTATTGAAAAATCATCACAATGTCCGGATATGCATGGTGAAAAATCATCACAATCCAATCAGCTCACATCCCTCCCCAATTCATCTATACGCACGCTGCTGAAAAATCATCACAATCCAATCTGCTCACATCCCTCCCCCTTTCATCACACATGGAACTCAGCAGTGTGATGCACTCACCGATGCACACGACCTTACTCAACCGCCAAAAACGCAAGGATTTTTCATTCAGTTAAAGAAGAGGAAGGGGGAAGCAATGGATGAGTACCTGCTTGGCCGCCATCGCCGGCGAAGCGTAGAACATGTAGCACGGCCTGCCCGCTGACCTGAACAGGATGGAGGAGCGGGAGGCCTCGGCGGCGGCTGTCCAGGCGACCTCGTTCTGCGGCGGCGGGGTGACCGGTTGCTGCTTTTCCCGCGGCCGCGTGCTCCCGCCTCGCCTATCCGGCGCCGGCGCGGTGGAGAAGCCGTCGGCAGGGGGAGGGGGAATGCGGGCGCTGGGGGATAGGGGATGGGGAGGAAGGAGGATGAAGGCGGCGTCACGACGACGGATCGGCGACAGGGCGACGGATCGGCGACCGCTGTTGATACGGAGGGGATC
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| CDS seq | ATGATTTTTCTAAAGTTGCGGTTAACTTCTAAACAAGTTAGTTATGCAATGGATAGCAATGGTGGCGGTTCAGCACCAACATCGTCCAAAAGACCAGGTCCTTTTGTGGATATAACTAATGTGATTAATGCCAAGTTGATAAACAAGCGTGCCGCGGTTATCCAATGTGAAATCAATGTTCCAAAAGACCATGAGAACTGTCAACAGATCAACAAGAACTCTACATCTAAGATTCAGAGAGCCTCAACTATTGGATTTGGCAATGAAAATAACGCTTCTGTCATTAGGCATGTGCATGAAGATGCATGA |
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| Protein seq | MIFLKLRLTSKQVSYAMDSNGGGSAPTSSKRPGPFVDITNVINAKLINKRAAVIQCEINVPKDHENCQQINKNSTSKIQRASTIGFGNENNASVIRHVHEDA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0672300 | OsMH63_01T0672300.1 | Chr01 | 42743845 | 42746553 | - | maker | ||
| CDS seq | ATGATTTTTCTAAAGTTGCGGTTAACTTCTAAACAAGTTAGTTATGCAATGGATAGCAATGGTGGCGGTTCAGCACCAACATCGTCCAAAAGACCAGGTCCTTTTGTGGATATAACTAATGTGATTAATGCCAAGTTGATAAACAAGCGTGCCGCGGTTATCCAATGTGAAATCAATGTTCCAAAAGACCATGAGAACTGTCAACAGATCAACAAGAACTCTACATCTAAGATTCAGAGAGCCTCAACTATTGGATTTGGCAATGAAAATAACGCTTCTGTCATTAGGCATGTGCATGAAGATGCATGA
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| Protein seq | MIFLKLRLTSKQVSYAMDSNGGGSAPTSSKRPGPFVDITNVINAKLINKRAAVIQCEINVPKDHENCQQINKNSTSKIQRASTIGFGNENNASVIRHVHEDA |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0672300 | OsMH63_01T0672300.2 | Chr01 | 42743730 | 42746551 | - | maker | ||
| CDS seq | ATGATTTTTCTAAAGTTGCGGTTAACTTCTAAACAAGTTAGTTATGCAATGGATAGCAATGGTGGCGGTTCAGCACCAACATCGTCCAAAAGACCAGGTCCTTTTGTGGATATAACTAATGTGATTAATGCCAAGTTGATAAACAAGCGTGCCGCGGTTATCCAATGTGAAATCAATGTTCCAAAAGACCATGAGAACTGTCAACAGATCAACAAGAACTCTACATCTAAGATTCAGAGAGCCTCAACTATTGGATTTGGCAATGAAAATAACGCTTCTGTCATTAGGCATGTGCATGAAGATGCATGA
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| Protein seq | MIFLKLRLTSKQVSYAMDSNGGGSAPTSSKRPGPFVDITNVINAKLINKRAAVIQCEINVPKDHENCQQINKNSTSKIQRASTIGFGNENNASVIRHVHEDA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.441202 | 3.263627 | 4.8714855 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0001570 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0045350 | RBH | 0.000000 | 0.027699 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0044930 | RBH | 0.000000 | 14.077952 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0044440 | RBH | 0.0 | 0.444977 | 0.726831 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0002300 | RBH | 1.628102 | 1.779079 | 5.4039155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0044900 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0044840 | RBH | 0.166844 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0045150 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0045160 | RBH | 0.000000 | 0.826377 | 0.399946 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0044910 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
