Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0588600 | OGI:01106340 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:37410364-37412337 | ||||||||
| Gene Symbol | OsLysM-RLK4 | ||||||||||
| DNA seq | TCACTCACTCTTGTCTCTGTGGCTCTCTGGGCAGGGGAGCAAGGCGGCAGCGGCGGCGGGAGCAGGGGAGCAAGGCGGCGGCGGCGGCGGCCTCCGGTCTCCCCCGCCCTCTTCGCTTTGGGCTGAGGCCGCCGTGCTCGCCCCGTCCTCTTCACTCTGCCCAAGGTGGCGGAAACCCAAATTGATGGAGCGATGGAGATGGAGATGGAGTTGTTGGTGGGGATGTGGAACTTGTCGGCGACCCACGACATCTCCGGCGCGCGCTGCCGCGTCCTTGGCCACGCACCGGAGGCGGTTGTGGAGGTGGACGGTGTCGGCCTGGAGGTGGACGTAGTGGAGCGCGTCGGTGACGTCGGCGGCAACCTTGAGGCGAGACCGCCACGACGCGAGCAGGGTGAAGGACGGGTTGTTCGGGTTGCGGTGGAGCGCGAAGAGCGGCGACGCGTCGAGGAGGAGCTCGTAGGCGAGGAAGAGCGAGCCGTTGGGCGACGCGGAGACGCCGAGGAGGCGCGCGATGGCGGCGTGGTGGCAGTGGCCGAGGATGGCGAGACGGGCGGTGACGTCCGCCTGGTCGCGCGCGGAGCGGGCGGCGGTGTAGGATCGAATCACAAGAACTAAGCCAACCAGAGGGGGGTGAATGGTTGGTATACCCAAAAACCGAAAACTTTTAGCGGAAATAAAAGTTACCCTCGAAATCGACGGAGATCGGTCTGACCGAAGTTGCCTTGCCGGTCTGACCGCTCGGATGCCGTCGGTCTAACCGGTATAGATCAACCGGTCTGACCGCTGAAGCTGCTTGCCGCGCCTGTCGTCACCTCCGGTCTGACCGCCGTGCACCCGCCGGTCTGACCGCCGCTTGCCGCCGGTCTGACCGCCGGTAGATCGCCGGTTAGACCGCCGAAACCCGGTGAAACACAAATCGAAGAACTCTTAAAGTAGATGACGACTTTATTGATTCTCTCTGTATTTACAAAGTGCACCAACAGCACTCCTTATAAAAATTTCGACTAAACTCGAAACCCTAACTCTAAACTCAACTCAATTGCTCTCTAAAGCGATACCGAGAAGCCTCACGCTTCCCCTCTATTTATACATGAGGTATGCAGCCTAAAGCCACGAACCAAACTCATACTAAGAGTCCTAAATACCTTAGGAAACCCTCTAGTACAAGAAAGAAACTTTACATAACCAATCGTACTAAATTTGGACTCCTTCCAAATTCGACTCCACATCCCATACGCACACAATACCTCCATCGTATGCCATATAGAATCTCCATCAACCACGTGCATCAACTCTAGCCTAAGTATCCCGCATGATCTCTGACCATCACGGACGTCGTCTTATCCCCAAGCCGACTCCCGGTCCATCACCACAAATACTCTCCCAAGACATCGAGTCACTACACATGAAACAAACAAAGAAACCATATTCCGAGACCAAGCTATCTCCAACTTGACTCATTAGCAGCAAACAATAGTATTACATACGTATAGTATCTATCTAGAAGCCATAATCATGAAATAAACTCGGATATCCAAATAAACAACCCGAAACCGAAACCGACACAGTGTCGGCCAGTCAGACCGCGGGCTGCGCCAGTCTGACCGCGCATTACACGCCGGTCTGACCGGCACACACTGCTCGGTCTGACCGGTCACATGAAATAACGATCCTGCGATTCACCTGTAAATCCAATCATCTCCAAAACCACTTCATGAATAAATTCCAAATAACAAAACCAATAATCTCCAATGTCCAATTATTCGTCACAGAATAATAACCAAAAACACCTTTAATTTTACAGGCGGAAGACCGCGGCGGAGTGGCCGCGGAGGGAGCAGCGAAACGAAGAGGAAAACTCACCGCGGCGGCGGCGGCGAGGCAGTGGGAGGAGAAGTCGGCGGTGGCGGCGGCGACGTGGACCACGCACTTGTGGTGCACGCTTGCCATGGCAAATGGCAATGATGCCAT
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| CDS seq | ATGGCATCATTGCCATTTGCCATGGCAAGCGTGCACCACAAGTGCGTGGTCCACGTCGCCGCCGCCACCGCCGACTTCTCCTCCCACTGCCTCGCCGCCGCCGCCGCGACCGGCGGCAAGCGGCGGTCAGACCGGCGGGTGCACGGCGGTCAGACCGGAGGTGACGACAGGCGCGGCAAGCAGCTTCAGCGGTCAGACCGGTTGATCTATACCGTTCTTGTGATTCGATCCTACACCGCCGCCCGCTCCGCGCGCGACCAGGCGGACGTCACCGCCCGTCTCGCCATCCTCGGCCACTGCCACCACGCCGCCATCGCGCGCCTCCTCGGCGTCTCCGCGTCGCCCAACGGCTCGCTCTTCCTCGCCTACGAGCTCCTCCTCGACGCGTCGCCGCTCTTCGCGCTCCACCGCAACCCGAACAACCCGTCCTTCACCCTGCTCGCGTCGTGGCGGTCTCGCCTCAAGGTTGCCGCCGACGTCACCGACGCGCTCCACTACGTCCACCTCCAGGCCGACACCGTCCACCTCCACAACCGCCTCCGGTGCGTGGCCAAGGACGCGGCAGCGCGCGCCGGAGATGTCAGTGAAGAGGACGGGGCGAGCACGGCGGCCTCAGCCCAAAGCGAAGAGGGCGGGGGAGACCGGAGGCCGCCGCCGCCGCCGCCTTGCTCCCCTGCTCCCGCCGCCGCTGCCGCCTTGCTCCCCTGCCCAGAGAGCCACAGAGACAAGAGTGAGTGA
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| Protein seq | MASLPFAMASVHHKCVVHVAAATADFSSHCLAAAAATGGKRRSDRRVHGGQTGGDDRRGKQLQRSDRLIYTVLVIRSYTAARSARDQADVTARLAILGHCHHAAIARLLGVSASPNGSLFLAYELLLDASPLFALHRNPNNPSFTLLASWRSRLKVAADVTDALHYVHLQADTVHLHNRLRCVAKDAAARAGDVSEEDGASTAASAQSEEGGGDRRPPPPPPCSPAPAAAAALLPCPESHRDKSE |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0588600 | OsMH63_01T0588600.1 | Chr01 | 37410364 | 37412337 | - | maker | ||
| CDS seq | ATGGCATCATTGCCATTTGCCATGGCAAGCGTGCACCACAAGTGCGTGGTCCACGTCGCCGCCGCCACCGCCGACTTCTCCTCCCACTGCCTCGCCGCCGCCGCCGCGACCGGCGGCAAGCGGCGGTCAGACCGGCGGGTGCACGGCGGTCAGACCGGAGGTGACGACAGGCGCGGCAAGCAGCTTCAGCGGTCAGACCGGTTGATCTATACCGTTCTTGTGATTCGATCCTACACCGCCGCCCGCTCCGCGCGCGACCAGGCGGACGTCACCGCCCGTCTCGCCATCCTCGGCCACTGCCACCACGCCGCCATCGCGCGCCTCCTCGGCGTCTCCGCGTCGCCCAACGGCTCGCTCTTCCTCGCCTACGAGCTCCTCCTCGACGCGTCGCCGCTCTTCGCGCTCCACCGCAACCCGAACAACCCGTCCTTCACCCTGCTCGCGTCGTGGCGGTCTCGCCTCAAGGTTGCCGCCGACGTCACCGACGCGCTCCACTACGTCCACCTCCAGGCCGACACCGTCCACCTCCACAACCGCCTCCGGTGCGTGGCCAAGGACGCGGCAGCGCGCGCCGGAGATGTCAGTGAAGAGGACGGGGCGAGCACGGCGGCCTCAGCCCAAAGCGAAGAGGGCGGGGGAGACCGGAGGCCGCCGCCGCCGCCGCCTTGCTCCCCTGCTCCCGCCGCCGCTGCCGCCTTGCTCCCCTGCCCAGAGAGCCACAGAGACAAGAGTGAGTGA
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| Protein seq | MASLPFAMASVHHKCVVHVAAATADFSSHCLAAAAATGGKRRSDRRVHGGQTGGDDRRGKQLQRSDRLIYTVLVIRSYTAARSARDQADVTARLAILGHCHHAAIARLLGVSASPNGSLFLAYELLLDASPLFALHRNPNNPSFTLLASWRSRLKVAADVTDALHYVHLQADTVHLHNRLRCVAKDAAARAGDVSEEDGASTAASAQSEEGGGDRRPPPPPPCSPAPAAAAALLPCPESHRDKSE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0741200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0032040 | SBH | 0.0 | 2.112826 | 2.664161 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0031740 | SBH | 0.0 | 0.160862 | 0.102706 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0585600 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0031940 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0032010 | SBH | 0.0 | 3.714006 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0032210 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0032320 | SBH | 0.000000 | 0.094808 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0032130 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G032580 | SBH | 0.064492 | 1.187530 | 2.509980 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0032220 | SBH | 0.0 | 0.000000 | 0.000000 |
