Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_01G0566200		OGI:01102670 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr01:36060017-36063349		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		CTATATCTGCTCAGGCACAATGACATCCCCGTCAATCTCTATATCTCTGATGTGAGCTATCTTTGCATGATACTCCCCACCTTCTTGGCATTGTTGCTTAATTTGTGGACATCCCTTGATGTAAAGCTCGTTGAGCCCCATCGGCAGGCCATCTTTTGGCAAGCTTTCAACCCCGGGACAGTTACTAATCCGTAGTGTTTCAAGTGAGGAGATGTTGTGCAGACCAGGAGGTAAGCATTGAAGATCATCACAGCATGATATCTCCAAGAATTGAAGTGTGTGAGGTAAACCCTCTGCTGGAAAGTTATTGATATCAGGACAATCAGCAATTTCAAAATGACTTAGATGAGGAAGGTAACTTAGGCCATTTAGAAGCACACTTGCTAATGGAGTGCATGAGTTTAGACGGATATCTTCGATTGAAGTGGGAAGCAAGCCTCCCTCCAGTGCTGTCCAAGGCACCAGACAAGGGCACTCGTAGATGTGCAGGCTTCTGAGTGATATTAATGGACGGAAACACTCCTCTGGCAGTGAAACAAGCCCTTCACAATGGGCTATTGTTAGACTTTTGAGAGCTGTTGGTCTGTATGCAAGTAAACCTACACGTAGAGATGTTAGATTTGGGCAATCATTGATGTATAGAGATGTTGGTGAAGATGGACAAGAATTATTCTGAAGCTCTGGAAGTGACTCAAGCCCTGTTTCAGAAATCCACAGTGTTCTTAGTGTTGATGGAATAGGAGGTAACTTCTTCAACTGTGGGCACTTGATGAGACCAAGTTCAGTTAATTGTGGAAACAATTGATCAGCAACATCAAAAATCCACTCGCTCAGATTTGGCATATCTTCCAATAGAAGATCTTCTAAAGCTGGAAAACCTTTTGGTTGTCCAAATCCTGTGAACTCACTGCTGAGTTGTGTCACCTCAGTTACTCCAGCTATGACAAGATATTTTAAAAAGGGAAGCTGGCCTAAAGCTGGAAGCCTTGTGCTTCTACAGTTGCATATATGTATGGTTTGCAGCTTGGGAAGAAATGAACTAGCCAGCCAGCTTGGGAACCTCACCCCAGGGAACCCTTTAATCACTAATTCCTTGAGATCGAGATGTGGTTGAAGACCTTCTAGAACTTCTTGCTGCTCTGAAGGATTGCTTTCACAGTCCTCATCCCATATAAGGTGTAGAGTTCGAAGATGCTCTTTGTTTCTCAACTTTGCACAAACTGCATCTTGCCCATTAGGTACATTATTGAGGCCACGAATAGAAAGTTGTCCTTGCAGCTCATCCATGTTATTTAGTTCTGTGACGTTGTGCCCTGAGCGCTTCTGAACTACAAATTCTTCTAGTTCCTGTAGGCATACCAAACTTCCAATTCCATGTATCCTGGACAGTAGTCTTGTACTTGCTTCTAAGTGGCGCAGATTAATGAGCCTAGTGATGCCTTGTGGCACTTCCCTTAGAAAATTGCAGTCACTCAGCTTTAGTATTTGCAAGTTATAGAGCTTAACAAGAGATGCTGGTAATGTTTCGATTTCAGTGCTACTGAGATCTAGGAAGCGCAGTTGTTTCAGATTCCCTATAGATTCTGGTAACTCTTTAAGGCCTTGTCCATGCATATCAAGCACTCTAAGATATTCAAGTTTCATAAATAGACCATGAGGCAATTGAGACATCCTTGACTTGTATCCATGGATAATAGTCAGTGTCCTTAGCTTCCTAAACCCATACAGTGGATTGAAGTGCATGCACTTGGCATCCTTGCATGGAAATGAAAGATGACGGGTCTTAATGGCATTGTCATGTCTTCTCCCATAATCTAAGTGGTCGCAGTCTTCCATGGAGATAGATTTTGCAAGGTCGTGCATTGCATCATGCATCACATAGTTATTCTCATATGGCTGGAAGAAAGACCTGCTTAATAACTCATTAAAGTATGCATTTCCAGTATCTTCCATTCTCTTCTTTCTAGACTGTCTGATGAAACCAAGTGCTAGCCAGATCTTAACCAGTTTCTCTCTCCTGAACATATAATCCTTAGGATATACAGAACAGAATGCAAAGCACTGCTTAAGATGTGGTGGTAAATGGTTGTAACTTAGACGTAGGGCTGGCAGGATGTTATTCTTATCTGCCGGTAACTCCCATATGTCATTTTGCAGTATGTCCTTCCACTCCTCTTCATCTGTTTTGCAAAACAGGAGGCTCCCTAATGCCTTTGATGCAAGAGGCAATCCCTTCAGCTTCTTCACAATTTCCATTCCTATCGCCTCCAACTCTGGATGTGCGCTGCAGTCACCATCCCTAAATGCATGGCTCTTGAATACAGACCAGCTGTCATCATCTGATAGTTTCTGTAACTTGTAGGGCTCTATTCCTCCCATGATTCTGCCAACATTCTCATTTCGTGATGTCACCACTATCTTGCTTCCAAACCCTCCTGAAATTAAGGCTGCTCTATAGCTGTGCCATTTATCAAGGTCTTCATTCCAGACATCATCCAAGACAAGCAAGTACCTCTTGCCCCGCAATACTCTGGAGAGTGTTTCCTGTAGCATATTCATGTTAGTACTAGCAACAGATTGGTCATAGTCAGAAGCCTCAAGAGTTTCTTGTGTTAGCTTTCTCTCATCAAAACTTTCAGACACATAGATCCAGATCCTCAAGTCAAAGTGTTCTCTTACTCTGTCATCATGGTACACCATCTGCATAAGAGTAGTTTTACCAAGCCCACCCATGCCAACAACTGGAATGACACATAAGTTGCAGGAATTATGTCCATTATCAGAGAGCACCAGCCTCACCATTTCTTCTCTGTCCCTCTCCCTACCAAATACAGCCGAACTATCTACAAGAGAACTTGATTGCGGACGCTCTGAGGTATCATACCGTCTCATTTCACATATCATCTGGAGCCCAATGGTGTCGCGTTCTTGCGCAATCTTATCTAATCTCTCCAATATGATGTTAATCTTATGCTTTATCCTATGCTGGTACAGATTCCTACTCAAGAAGGAGGAAGAAAGAAAACTTGCCTTTGTGGGGAATATCACCTGCCTCTGCTTCATGCGCATACTTTTGGCTGAATAGCTGTCCAGCAGATCATCAAGGTCGTACGCGATATCCTTGAGCTTCGCTAGCCATCCCCTCACAGATGCATCTGTCAACTGCTTCTCCTCAGCATCGTCAAGGAAAGCCTGTAACTGAGACAGTGTGGAAGAGAGGCTCTCTAGCTTGCCATGTATGCCTCTCCAAGATATGAAATGATCAAGGGTTGCTTCTGACAATTTCTGGAAGAGGGTTTGCATGAAGGCTCCTAAAATTGCTTCTGCTGCCAT More
CDS seq		ATGGCAGCAGAAGCAATTTTAGGAGCCTTCATGCAAACCCTCTTCCAGAAATTGTCAGAAGCAACCCTTGATCATTTCATATCTTGGAGAGGCATACATGGCAAGCTAGAGAGCCTCTCTTCCACACTGTCTCAGTTACAGGCTTTCCTTGACGATGCTGAGGAGAAGCAGTTGACAGATGCATCTGTGAGGGGATGGCTAGCGAAGCTCAAGGATATCGCGTACGACCTTGATGATCTGCTGGACAGCTATTCAGCCAAAAGTATGCGCATGAAGCAGAGGCAGGTGATATTCCCCACAAAGGCAAGTTTTCTTTCTTCCTCCTTCTTGAGTAGGAATCTGTACCAGCATAGGATAAAGCATAAGATTAACATCATATTGGAGAGATTAGATAAGATTGCGCAAGAACGCGACACCATTGGGCTCCAGATGATATGTGAAATGAGACGGTATGATACCTCAGAGCGTCCGCAATCAAGTTCTCTTGTAGATAGTTCGGCTGTATTTGGTAGGGAGAGGGACAGAGAAGAAATGGTGAGGCTGGTGCTCTCTGATAATGGACATAATTCCTGCAACTTATGTGTCATTCCAGTTGTTGGCATGGGTGGGCTTGGTAAAACTACTCTTATGCAGATGGTGTACCATGATGACAGAGTAAGAGAACACTTTGACTTGAGGATCTGGATCTATGTGTCTGAAAGTTTTGATGAGAGAAAGCTAACACAAGAAACTCTTGAGGCTTCTGACTATGACCAATCTGTTGCTAGTACTAACATGAATATGCTACAGGAAACACTCTCCAGAGTATTGCGGGGCAAGAGGTACTTGCTTGTCTTGGATGATGTCTGGAATGAAGACCTTGATAAATGGCACAGCTATAGAGCAGCCTTAATTTCAGGAGGGTTTGGAAGCAAGATAGTGGTGACATCACGAAATGAGAATGTTGGCAGAATCATGGGAGGAATAGAGCCCTACAAGTTACAGAAACTATCAGATGATGACAGCTGGTCTGTATTCAAGAGCCATGCATTTAGGGATGGTGACTGCAGCGCACATCCAGAGTTGGAGGCGATAGGAATGGAAATTGTGAAGAAGCTGAAGGGATTGCCTCTTGCATCAAAGGCATTAGGGAGCCTCCTGTTTTGCAAAACAGATGAAGAGGAGTGGAAGGACATACTGCAAAATGACATATGGGAGTTACCGGCAGATAAGAATAACATCCTGCCAGCCCTACGTCTAAGTTACAACCATTTACCACCACATCTTAAGCAGTGCTTTGCATTCTGTTCTGTATATCCTAAGGATTATATGTTCAGGAGAGAGAAACTGGTTAAGATCTGGCTAGCACTTGGTTTCATCAGACAGTCTAGAAAGAAGAGAATGGAAGATACTGGAAATGCATACTTTAATGAGTTATTAAGCAGGTCTTTCTTCCAGCCATATGAGAATAACTATGTGATGCATGATGCAATGCACGACCTTGCAAAATCTATCTCCATGGAAGACTGCGACCACTTAGATTATGGGAGAAGACATGACAATGCCATTAAGACCCGTCATCTTTCATTTCCATGCAAGGATGCCAAGTGCATGCACTTCAATCCACTGTATGGGTTTAGGAAGCTAAGGACACTGACTATTATCCATGGATACAAGTCAAGGATGTCTCAATTGCCTCATGGTCTATTTATGAAACTTGAATATCTTAGAGTGCTTGATATGCATGGACAAGGCCTTAAAGAGTTACCAGAATCTATAGGGAATCTGAAACAACTGCGCTTCCTAGATCTCAGTAGCACTGAAATCGAAACATTACCAGCATCTCTTGTTAAGCTCTATAACTTGCAAATACTAAAGCTGAGTGACTGCAATTTTCTAAGGGAAGTGCCACAAGGCATCACTAGGCTCATTAATCTGCGCCACTTAGAAGCAAGTACAAGACTACTGTCCAGGATACATGGAATTGGAAGTTTGGTATGCCTACAGGAACTAGAAGAATTTGTAGTTCAGAAGCGCTCAGGGCACAACGTCACAGAACTAAATAACATGGATGAGCTGCAAGGACAACTTTCTATTCGTGGCCTCAATAATGTACCTAATGGGCAAGATGCAGTTTGTGCAAAGTTGAGAAACAAAGAGCATCTTCGAACTCTACACCTTATATGGGATGAGGACTGTGAAAGCAATCCTTCAGAGCAGCAAGAAGTTCTAGAAGGTCTTCAACCACATCTCGATCTCAAGGAATTAGTGATTAAAGGGTTCCCTGGGGTGAGGTTCCCAAGCTGGCTGGCTAGTTCATTTCTTCCCAAGCTGCAAACCATACATATATGCAACTGTAGAAGCACAAGGCTTCCAGCTTTAGGCCAGCTTCCCTTTTTAAAATATCTTGTCATAGCTGGAGTAACTGAGGTGACACAACTCAGCAGTGAGTTCACAGGATTTGGACAACCAAAAGGTTTTCCAGCTTTAGAAGATCTTCTATTGGAAGATATGCCAAATCTGAGCGAGTGGATTTTTGATGTTGCTGATCAATTGTTTCCACAATTAACTGAACTTGGTCTCATCAAGTGCCCACAGTTGAAGAAGTTACCTCCTATTCCATCAACACTAAGAACACTGTGGATTTCTGAAACAGGGCTTGAGTCACTTCCAGAGCTTCAGAATAATTCTTGTCCATCTTCACCAACATCTCTATACATCAATGATTGCCCAAATCTAACATCTCTACGTGTAGGTTTACTTGCATACAGACCAACAGCTCTCAAAAGTCTAACAATAGCCCATTGTGAAGGGCTTGTTTCACTGCCAGAGGAGTGTTTCCGTCCATTAATATCACTCAGAAGCCTGCACATCTACGAGTGCCCTTGTCTGGTGCCTTGGACAGCACTGGAGGGAGGCTTGCTTCCCACTTCAATCGAAGATATCCGTCTAAACTCATGCACTCCATTAGCAAGTGTGCTTCTAAATGGCCTAAGTTACCTTCCTCATCTAAGTCATTTTGAAATTGCTGATTGTCCTGATATCAATAACTTTCCAGCAGAGGGTTTACCTCACACACTTCAATTCTTGGAGATATCATGCTGTGATGATCTTCAATGCTTACCTCCTGGTCTGCACAACATCTCCTCACTTGAAACACTACGGATTAGTAACTGTCCCGGGGTTGAAAGCTTGCCAAAAGATGGCCTGCCGATGGGGCTCAACGAGCTTTACATCAAGGGATGTCCACAAATTAAGCAACAATGCCAAGAAGGTGGGGAGTATCATGCAAAGATAGCTCACATCAGAGATATAGAGATTGACGGGGATGTCATTGTGCCTGAGCAGATATAG More
Protein seq		MAAEAILGAFMQTLFQKLSEATLDHFISWRGIHGKLESLSSTLSQLQAFLDDAEEKQLTDASVRGWLAKLKDIAYDLDDLLDSYSAKSMRMKQRQVIFPTKASFLSSSFLSRNLYQHRIKHKINIILERLDKIAQERDTIGLQMICEMRRYDTSERPQSSSLVDSSAVFGRERDREEMVRLVLSDNGHNSCNLCVIPVVGMGGLGKTTLMQMVYHDDRVREHFDLRIWIYVSESFDERKLTQETLEASDYDQSVASTNMNMLQETLSRVLRGKRYLLVLDDVWNEDLDKWHSYRAALISGGFGSKIVVTSRNENVGRIMGGIEPYKLQKLSDDDSWSVFKSHAFRDGDCSAHPELEAIGMEIVKKLKGLPLASKALGSLLFCKTDEEEWKDILQNDIWELPADKNNILPALRLSYNHLPPHLKQCFAFCSVYPKDYMFRREKLVKIWLALGFIRQSRKKRMEDTGNAYFNELLSRSFFQPYENNYVMHDAMHDLAKSISMEDCDHLDYGRRHDNAIKTRHLSFPCKDAKCMHFNPLYGFRKLRTLTIIHGYKSRMSQLPHGLFMKLEYLRVLDMHGQGLKELPESIGNLKQLRFLDLSSTEIETLPASLVKLYNLQILKLSDCNFLREVPQGITRLINLRHLEASTRLLSRIHGIGSLVCLQELEEFVVQKRSGHNVTELNNMDELQGQLSIRGLNNVPNGQDAVCAKLRNKEHLRTLHLIWDEDCESNPSEQQEVLEGLQPHLDLKELVIKGFPGVRFPSWLASSFLPKLQTIHICNCRSTRLPALGQLPFLKYLVIAGVTEVTQLSSEFTGFGQPKGFPALEDLLLEDMPNLSEWIFDVADQLFPQLTELGLIKCPQLKKLPPIPSTLRTLWISETGLESLPELQNNSCPSSPTSLYINDCPNLTSLRVGLLAYRPTALKSLTIAHCEGLVSLPEECFRPLISLRSLHIYECPCLVPWTALEGGLLPTSIEDIRLNSCTPLASVLLNGLSYLPHLSHFEIADCPDINNFPAEGLPHTLQFLEISCCDDLQCLPPGLHNISSLETLRISNCPGVESLPKDGLPMGLNELYIKGCPQIKQQCQEGGEYHAKIAHIRDIEIDGDVIVPEQI
Function		Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0566200	OsMH63_01T0566200.1	Chr01	36060017	36063349	-	maker
CDS seq	ATGGCAGCAGAAGCAATTTTAGGAGCCTTCATGCAAACCCTCTTCCAGAAATTGTCAGAAGCAACCCTTGATCATTTCATATCTTGGAGAGGCATACATGGCAAGCTAGAGAGCCTCTCTTCCACACTGTCTCAGTTACAGGCTTTCCTTGACGATGCTGAGGAGAAGCAGTTGACAGATGCATCTGTGAGGGGATGGCTAGCGAAGCTCAAGGATATCGCGTACGACCTTGATGATCTGCTGGACAGCTATTCAGCCAAAAGTATGCGCATGAAGCAGAGGCAGGTGATATTCCCCACAAAGGCAAGTTTTCTTTCTTCCTCCTTCTTGAGTAGGAATCTGTACCAGCATAGGATAAAGCATAAGATTAACATCATATTGGAGAGATTAGATAAGATTGCGCAAGAACGCGACACCATTGGGCTCCAGATGATATGTGAAATGAGACGGTATGATACCTCAGAGCGTCCGCAATCAAGTTCTCTTGTAGATAGTTCGGCTGTATTTGGTAGGGAGAGGGACAGAGAAGAAATGGTGAGGCTGGTGCTCTCTGATAATGGACATAATTCCTGCAACTTATGTGTCATTCCAGTTGTTGGCATGGGTGGGCTTGGTAAAACTACTCTTATGCAGATGGTGTACCATGATGACAGAGTAAGAGAACACTTTGACTTGAGGATCTGGATCTATGTGTCTGAAAGTTTTGATGAGAGAAAGCTAACACAAGAAACTCTTGAGGCTTCTGACTATGACCAATCTGTTGCTAGTACTAACATGAATATGCTACAGGAAACACTCTCCAGAGTATTGCGGGGCAAGAGGTACTTGCTTGTCTTGGATGATGTCTGGAATGAAGACCTTGATAAATGGCACAGCTATAGAGCAGCCTTAATTTCAGGAGGGTTTGGAAGCAAGATAGTGGTGACATCACGAAATGAGAATGTTGGCAGAATCATGGGAGGAATAGAGCCCTACAAGTTACAGAAACTATCAGATGATGACAGCTGGTCTGTATTCAAGAGCCATGCATTTAGGGATGGTGACTGCAGCGCACATCCAGAGTTGGAGGCGATAGGAATGGAAATTGTGAAGAAGCTGAAGGGATTGCCTCTTGCATCAAAGGCATTAGGGAGCCTCCTGTTTTGCAAAACAGATGAAGAGGAGTGGAAGGACATACTGCAAAATGACATATGGGAGTTACCGGCAGATAAGAATAACATCCTGCCAGCCCTACGTCTAAGTTACAACCATTTACCACCACATCTTAAGCAGTGCTTTGCATTCTGTTCTGTATATCCTAAGGATTATATGTTCAGGAGAGAGAAACTGGTTAAGATCTGGCTAGCACTTGGTTTCATCAGACAGTCTAGAAAGAAGAGAATGGAAGATACTGGAAATGCATACTTTAATGAGTTATTAAGCAGGTCTTTCTTCCAGCCATATGAGAATAACTATGTGATGCATGATGCAATGCACGACCTTGCAAAATCTATCTCCATGGAAGACTGCGACCACTTAGATTATGGGAGAAGACATGACAATGCCATTAAGACCCGTCATCTTTCATTTCCATGCAAGGATGCCAAGTGCATGCACTTCAATCCACTGTATGGGTTTAGGAAGCTAAGGACACTGACTATTATCCATGGATACAAGTCAAGGATGTCTCAATTGCCTCATGGTCTATTTATGAAACTTGAATATCTTAGAGTGCTTGATATGCATGGACAAGGCCTTAAAGAGTTACCAGAATCTATAGGGAATCTGAAACAACTGCGCTTCCTAGATCTCAGTAGCACTGAAATCGAAACATTACCAGCATCTCTTGTTAAGCTCTATAACTTGCAAATACTAAAGCTGAGTGACTGCAATTTTCTAAGGGAAGTGCCACAAGGCATCACTAGGCTCATTAATCTGCGCCACTTAGAAGCAAGTACAAGACTACTGTCCAGGATACATGGAATTGGAAGTTTGGTATGCCTACAGGAACTAGAAGAATTTGTAGTTCAGAAGCGCTCAGGGCACAACGTCACAGAACTAAATAACATGGATGAGCTGCAAGGACAACTTTCTATTCGTGGCCTCAATAATGTACCTAATGGGCAAGATGCAGTTTGTGCAAAGTTGAGAAACAAAGAGCATCTTCGAACTCTACACCTTATATGGGATGAGGACTGTGAAAGCAATCCTTCAGAGCAGCAAGAAGTTCTAGAAGGTCTTCAACCACATCTCGATCTCAAGGAATTAGTGATTAAAGGGTTCCCTGGGGTGAGGTTCCCAAGCTGGCTGGCTAGTTCATTTCTTCCCAAGCTGCAAACCATACATATATGCAACTGTAGAAGCACAAGGCTTCCAGCTTTAGGCCAGCTTCCCTTTTTAAAATATCTTGTCATAGCTGGAGTAACTGAGGTGACACAACTCAGCAGTGAGTTCACAGGATTTGGACAACCAAAAGGTTTTCCAGCTTTAGAAGATCTTCTATTGGAAGATATGCCAAATCTGAGCGAGTGGATTTTTGATGTTGCTGATCAATTGTTTCCACAATTAACTGAACTTGGTCTCATCAAGTGCCCACAGTTGAAGAAGTTACCTCCTATTCCATCAACACTAAGAACACTGTGGATTTCTGAAACAGGGCTTGAGTCACTTCCAGAGCTTCAGAATAATTCTTGTCCATCTTCACCAACATCTCTATACATCAATGATTGCCCAAATCTAACATCTCTACGTGTAGGTTTACTTGCATACAGACCAACAGCTCTCAAAAGTCTAACAATAGCCCATTGTGAAGGGCTTGTTTCACTGCCAGAGGAGTGTTTCCGTCCATTAATATCACTCAGAAGCCTGCACATCTACGAGTGCCCTTGTCTGGTGCCTTGGACAGCACTGGAGGGAGGCTTGCTTCCCACTTCAATCGAAGATATCCGTCTAAACTCATGCACTCCATTAGCAAGTGTGCTTCTAAATGGCCTAAGTTACCTTCCTCATCTAAGTCATTTTGAAATTGCTGATTGTCCTGATATCAATAACTTTCCAGCAGAGGGTTTACCTCACACACTTCAATTCTTGGAGATATCATGCTGTGATGATCTTCAATGCTTACCTCCTGGTCTGCACAACATCTCCTCACTTGAAACACTACGGATTAGTAACTGTCCCGGGGTTGAAAGCTTGCCAAAAGATGGCCTGCCGATGGGGCTCAACGAGCTTTACATCAAGGGATGTCCACAAATTAAGCAACAATGCCAAGAAGGTGGGGAGTATCATGCAAAGATAGCTCACATCAGAGATATAGAGATTGACGGGGATGTCATTGTGCCTGAGCAGATATAG More
Protein seq	MAAEAILGAFMQTLFQKLSEATLDHFISWRGIHGKLESLSSTLSQLQAFLDDAEEKQLTDASVRGWLAKLKDIAYDLDDLLDSYSAKSMRMKQRQVIFPTKASFLSSSFLSRNLYQHRIKHKINIILERLDKIAQERDTIGLQMICEMRRYDTSERPQSSSLVDSSAVFGRERDREEMVRLVLSDNGHNSCNLCVIPVVGMGGLGKTTLMQMVYHDDRVREHFDLRIWIYVSESFDERKLTQETLEASDYDQSVASTNMNMLQETLSRVLRGKRYLLVLDDVWNEDLDKWHSYRAALISGGFGSKIVVTSRNENVGRIMGGIEPYKLQKLSDDDSWSVFKSHAFRDGDCSAHPELEAIGMEIVKKLKGLPLASKALGSLLFCKTDEEEWKDILQNDIWELPADKNNILPALRLSYNHLPPHLKQCFAFCSVYPKDYMFRREKLVKIWLALGFIRQSRKKRMEDTGNAYFNELLSRSFFQPYENNYVMHDAMHDLAKSISMEDCDHLDYGRRHDNAIKTRHLSFPCKDAKCMHFNPLYGFRKLRTLTIIHGYKSRMSQLPHGLFMKLEYLRVLDMHGQGLKELPESIGNLKQLRFLDLSSTEIETLPASLVKLYNLQILKLSDCNFLREVPQGITRLINLRHLEASTRLLSRIHGIGSLVCLQELEEFVVQKRSGHNVTELNNMDELQGQLSIRGLNNVPNGQDAVCAKLRNKEHLRTLHLIWDEDCESNPSEQQEVLEGLQPHLDLKELVIKGFPGVRFPSWLASSFLPKLQTIHICNCRSTRLPALGQLPFLKYLVIAGVTEVTQLSSEFTGFGQPKGFPALEDLLLEDMPNLSEWIFDVADQLFPQLTELGLIKCPQLKKLPPIPSTLRTLWISETGLESLPELQNNSCPSSPTSLYINDCPNLTSLRVGLLAYRPTALKSLTIAHCEGLVSLPEECFRPLISLRSLHIYECPCLVPWTALEGGLLPTSIEDIRLNSCTPLASVLLNGLSYLPHLSHFEIADCPDINNFPAEGLPHTLQFLEISCCDDLQCLPPGLHNISSLETLRISNCPGVESLPKDGLPMGLNELYIKGCPQIKQQCQEGGEYHAKIAHIRDIEIDGDVIVPEQI More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.4890705	14.9375435	0.79092

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0799000	SBH	0.307265	0.086279	0.362942
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g72390	SBH	0.0	0.0	0.0
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0781100	SBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0037410	RBH	0.000000	1.574637	0.314405
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0036870	RBH	0.0	0.641035	0.553095
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0037270	RBH	0.063179	0.666690	0.198649
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0036670	RBH	0.050444	0.016057	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0036330	RBH	1.256328	1.036032	0.881856
Minghui 63 \| MH63RS3 \| HZAU	NA	NA	NA	NA	NA
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0036080	RBH	0.000000	0.048124	0.128073
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0563500	RBH	0.543096	17.170106	2.295448
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0036200	RBH	0.037284	0.036456	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0036270	RBH	0.163996	1.794797	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0036510	RBH	1.247414	1.881917	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0036580	RBH	0.0	0.357889	0.082335
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0036360	RBH	0.035423	1.246748	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G036850	RBH	0.000000	0.603515	0.000000
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0036570	RBH	0.000000	9.671400	0.284955

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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