Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0536600 | OGI:01097340 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:34240973-34242762 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCCGGATTCGCCTCTGTCCAAGATGGATCCGGCCTAGAGGAGGAAGTCCCGACCGCTGAGATGACCATGGACGCCGGACTAGAGCATGGCCATGGGCGCGGCTTCCCTCCTCCCGCAACCGGCCAGGGGCGCGGCTGCCCGCCTCCTGCTACCGGCCAGTGGCGCGGCCAGGGGCGCGGCTGCCCGCCTCCCGCTGCCGGAGCCGCCCTGCGCCCGCCTCCCGCTGCCGGAGCAGCCCTGGGGCGCAGCTGCCCGCCTCCCGCAGTCGGAGCCGTCCTGGGGCACGACAGCCCTGCCGCCGGAGCCGCCGTGGGGTGCGGCTGCTCACCCGTCGGCGCCGCACTGGGGCGCGGGTCCCAGCCGACCGGCGCTGCCCAGCAGCAAGCTAGTCCCCCTCGTACTGGAGCGACGAACCAGGTAATTACTTGTCTGATATTTGGATGACATCCAATGGTATAACCTCATGTGCTTCGTGTATGATATGAAGAAGCTAGCTAATTTGGGTTGTAGTCAAAACCATAAGCATGTGGATGAAGTATTACCTTCTGTTATGTGATATATTTTTTATTTCAGAAAGCTAAAATCGTCCATTTATTTGCATCTTGAAAACTATAAAATCTCTAATTTGACTGGACATGGTGATTCAATGGAATGGACTAATGAGCATACTACCATTGTTTGTCAATTGTTTGCCCAACAAGTGGTGAAAGGAAATAGGCCAAATACCCATTTGAACTCCGTAGGCTATGACGAAGTGATCCAGTTGTTTCGCCAAATAACTGGAATTGAGTTGAGTAAGCGACAGCTCAGGAATAAGTGGGATAAGATGAAGCCTGATTTTGTGGCATGGCAAAAATTAATGAGGCAGCAAACTGGAACAGGATGGGATCACTCAAGAGGTGTGATTGTAATGGATGATGAGTGGTGGAGAAAGGCAAAAAAGGTGAATTAGCTTTATACCTGCCCCTTAATTATTAACTAGAATTAGCTTGCTTCTAACACATTGTTTCATGGTTGAAATTAAATAGGATATTCCTGGATGCGGCAAGTTTAGGAAGAAACCCTTGCAGAATGTAGATGACCTTAACATTATGTTTTCTGACATTATTAATGATGCATTCGATCATTGGAATCCTATGAGTGAGAACCCCATCATACCTGAGCACATGACTGAGGAGGTCCAGGAAGATAATCTTGTAGTTGATGATGAAGAGGTCCAAGAGACCCCCATGGAGGAAATGAATGACGAGGCCCATGAGTGCCATGAGGTTTCTCCTTCTATTGGTATTGGAAAGAGAAGATCTCGGGCTGTTCTTGACAAAGGCAAGAAACCAAAGATAGGGACAGCACTTGTTATTCAAGAACAAATCACCAAGATTGCTGAGTCAGCCTCCTCTTTCACATCAAAAAAGTCAAATGAAGTAACCGTGCAACAAATCATGGATCTAATTTTGGATTGTGGGGCAGATTATGGTAGTGATGAGCATTTTATTGCTACAGAGTTATTTGTCAAAAAGGACCAAAGGGACATGTTTATGACCCTACCAAATAAAGAGTTTAGGTTTAATTGGCTTAGGAGAAAGTACAATGCCAAGTATGGAGCATGTTCCATACTTGCTGTTATGCAGGCCTTCTTGTTATTTCATAATTTCTCCCATTTGAAATATTTGTAATGGATTTGGTGTAATAATAGTACTGTTAGACTCATGCTTGTTTGTCTGATTGAATGGATTTGGATGAAGGCTGGGAAAAGAAATGGCGTCTACAGATTGATGTCACTTGGATGA
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| CDS seq | ATGGCCGGATTCGCCTCTGTCCAAGATGGATCCGGCCTAGAGGAGGAAGTCCCGACCGCTGAGATGACCATGGACGCCGGACTAGAGCATGGCCATGGGCGCGGCTTCCCTCCTCCCGCAACCGGCCAGGGGCGCGGCTGCCCGCCTCCTGCTACCGGCCAGTGGCGCGGCCAGGGGCGCGGCTGCCCGCCTCCCGCTGCCGGAGCCGCCCTGCGCCCGCCTCCCGCTGCCGGAGCAGCCCTGGGGCGCAGCTGCCCGCCTCCCGCAGTCGGAGCCGTCCTGGGGCACGACAGCCCTGCCGCCGGAGCCGCCGTGGGGTGCGGCTGCTCACCCGTCGGCGCCGCACTGGGGCGCGGGTCCCAGCCGACCGGCGCTGCCCAGCAGCAAGCTAGTCCCCCTCGTACTGGAGCGACGAACCAGCTAAAATCGTCCATTTATTTGCATCTTGAAAACTATAAAATCTCTAATTTGACTGGACATGGTGATTCAATGGAATGGACTAATGAGCATACTACCATTGTTTGTCAATTGTTTGCCCAACAAGTGGTGAAAGGAAATAGGCCAAATACCCATTTGAACTCCGTAGGCTATGACGAAGTGATCCAGTTGTTTCGCCAAATAACTGGAATTGAGTTGAGTAAGCGACAGCTCAGGAATAAGTGGGATAAGATGAAGCCTGATTTTGTGGCATGGCAAAAATTAATGAGGCAGCAAACTGGAACAGGATGGGATCACTCAAGAGGTGTGATTGTAATGGATGATGAGTGGTGGAGAAAGGCAAAAAAGGATATTCCTGGATGCGGCAAGTTTAGGAAGAAACCCTTGCAGAATGTAGATGACCTTAACATTATGTTTTCTGACATTATTAATGATGCATTCGATCATTGGAATCCTATGAGTGAGAACCCCATCATACCTGAGCACATGACTGAGGAGGTCCAGGAAGATAATCTTGTAGTTGATGATGAAGAGGTCCAAGAGACCCCCATGGAGGAAATGAATGACGAGGCCCATGAGTGCCATGAGGTTTCTCCTTCTATTGGTATTGGAAAGAGAAGATCTCGGGCTGTTCTTGACAAAGGCAAGAAACCAAAGATAGGGACAGCACTTGTTATTCAAGAACAAATCACCAAGATTGCTGAGTCAGCCTCCTCTTTCACATCAAAAAAGTCAAATGAAGTAACCGTGCAACAAATCATGGATCTAATTTTGGATTGTGGGGCAGATTATGGTAGTGATGAGCATTTTATTGCTACAGAGTTATTTGTCAAAAAGGACCAAAGGGACATGTTTATGACCCTACCAAATAAAGAGTTTAGGTTTAATTGGCTTAGGAGAAAGTACAATGCCAAGTATGGAGCATGTTCCATACTTGCTGTTATGCAGGCCTTCTTTACTGTTAGACTCATGCTTGTTTGTCTGATTGAATGGATTTGGATGAAGGCTGGGAAAAGAAATGGCGTCTACAGATTGATGTCACTTGGATGA
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| Protein seq | MAGFASVQDGSGLEEEVPTAEMTMDAGLEHGHGRGFPPPATGQGRGCPPPATGQWRGQGRGCPPPAAGAALRPPPAAGAALGRSCPPPAVGAVLGHDSPAAGAAVGCGCSPVGAALGRGSQPTGAAQQQASPPRTGATNQLKSSIYLHLENYKISNLTGHGDSMEWTNEHTTIVCQLFAQQVVKGNRPNTHLNSVGYDEVIQLFRQITGIELSKRQLRNKWDKMKPDFVAWQKLMRQQTGTGWDHSRGVIVMDDEWWRKAKKDIPGCGKFRKKPLQNVDDLNIMFSDIINDAFDHWNPMSENPIIPEHMTEEVQEDNLVVDDEEVQETPMEEMNDEAHECHEVSPSIGIGKRRSRAVLDKGKKPKIGTALVIQEQITKIAESASSFTSKKSNEVTVQQIMDLILDCGADYGSDEHFIATELFVKKDQRDMFMTLPNKEFRFNWLRRKYNAKYGACSILAVMQAFFTVRLMLVCLIEWIWMKAGKRNGVYRLMSLG |
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| Function | L10-interacting MYB domain-containing protein [UniProtKB/Swiss-Prot:Q9FFJ8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0536600 | OsMH63_01T0536600.1 | Chr01 | 34240973 | 34242762 | + | maker | ||
| CDS seq | ATGGCCGGATTCGCCTCTGTCCAAGATGGATCCGGCCTAGAGGAGGAAGTCCCGACCGCTGAGATGACCATGGACGCCGGACTAGAGCATGGCCATGGGCGCGGCTTCCCTCCTCCCGCAACCGGCCAGGGGCGCGGCTGCCCGCCTCCTGCTACCGGCCAGTGGCGCGGCCAGGGGCGCGGCTGCCCGCCTCCCGCTGCCGGAGCCGCCCTGCGCCCGCCTCCCGCTGCCGGAGCAGCCCTGGGGCGCAGCTGCCCGCCTCCCGCAGTCGGAGCCGTCCTGGGGCACGACAGCCCTGCCGCCGGAGCCGCCGTGGGGTGCGGCTGCTCACCCGTCGGCGCCGCACTGGGGCGCGGGTCCCAGCCGACCGGCGCTGCCCAGCAGCAAGCTAGTCCCCCTCGTACTGGAGCGACGAACCAGCTAAAATCGTCCATTTATTTGCATCTTGAAAACTATAAAATCTCTAATTTGACTGGACATGGTGATTCAATGGAATGGACTAATGAGCATACTACCATTGTTTGTCAATTGTTTGCCCAACAAGTGGTGAAAGGAAATAGGCCAAATACCCATTTGAACTCCGTAGGCTATGACGAAGTGATCCAGTTGTTTCGCCAAATAACTGGAATTGAGTTGAGTAAGCGACAGCTCAGGAATAAGTGGGATAAGATGAAGCCTGATTTTGTGGCATGGCAAAAATTAATGAGGCAGCAAACTGGAACAGGATGGGATCACTCAAGAGGTGTGATTGTAATGGATGATGAGTGGTGGAGAAAGGCAAAAAAGGATATTCCTGGATGCGGCAAGTTTAGGAAGAAACCCTTGCAGAATGTAGATGACCTTAACATTATGTTTTCTGACATTATTAATGATGCATTCGATCATTGGAATCCTATGAGTGAGAACCCCATCATACCTGAGCACATGACTGAGGAGGTCCAGGAAGATAATCTTGTAGTTGATGATGAAGAGGTCCAAGAGACCCCCATGGAGGAAATGAATGACGAGGCCCATGAGTGCCATGAGGTTTCTCCTTCTATTGGTATTGGAAAGAGAAGATCTCGGGCTGTTCTTGACAAAGGCAAGAAACCAAAGATAGGGACAGCACTTGTTATTCAAGAACAAATCACCAAGATTGCTGAGTCAGCCTCCTCTTTCACATCAAAAAAGTCAAATGAAGTAACCGTGCAACAAATCATGGATCTAATTTTGGATTGTGGGGCAGATTATGGTAGTGATGAGCATTTTATTGCTACAGAGTTATTTGTCAAAAAGGACCAAAGGGACATGTTTATGACCCTACCAAATAAAGAGTTTAGGTTTAATTGGCTTAGGAGAAAGTACAATGCCAAGTATGGAGCATGTTCCATACTTGCTGTTATGCAGGCCTTCTTTACTGTTAGACTCATGCTTGTTTGTCTGATTGAATGGATTTGGATGAAGGCTGGGAAAAGAAATGGCGTCTACAGATTGATGTCACTTGGATGA
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| Protein seq | MAGFASVQDGSGLEEEVPTAEMTMDAGLEHGHGRGFPPPATGQGRGCPPPATGQWRGQGRGCPPPAAGAALRPPPAAGAALGRSCPPPAVGAVLGHDSPAAGAAVGCGCSPVGAALGRGSQPTGAAQQQASPPRTGATNQLKSSIYLHLENYKISNLTGHGDSMEWTNEHTTIVCQLFAQQVVKGNRPNTHLNSVGYDEVIQLFRQITGIELSKRQLRNKWDKMKPDFVAWQKLMRQQTGTGWDHSRGVIVMDDEWWRKAKKDIPGCGKFRKKPLQNVDDLNIMFSDIINDAFDHWNPMSENPIIPEHMTEEVQEDNLVVDDEEVQETPMEEMNDEAHECHEVSPSIGIGKRRSRAVLDKGKKPKIGTALVIQEQITKIAESASSFTSKKSNEVTVQQIMDLILDCGADYGSDEHFIATELFVKKDQRDMFMTLPNKEFRFNWLRRKYNAKYGACSILAVMQAFFTVRLMLVCLIEWIWMKAGKRNGVYRLMSLG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.0128815 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0596300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0596300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0029950 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0030720 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0029940 | RBH | 0.000000 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0079800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0001960 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0562300 | RBH | 0.0093415 | 0.110054 | 0.052534 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0063600 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0009440 | SBH | 0.0 | 0.0 | 0.0 |
