Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0473300 | OGI:01002250 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:30319453-30320593 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGTTCTCCCACCGCGTTTGCTCCCCTTCTTCCTCCTCATCGGCGTCCTTTCCCATGGCTCGCCTCTCGCACCCACTTACAACACTTCCATTTGCTCCAAATCATACGAGTGTGGAGGCGTCAATATCTCCTACCCTTTCTATCTTTCCAACGCAATCGGCGGAACCTACGGTTACGCTCCCTTCTCTTGCGGCTACACCGATCTGGATATCACTTGCAGCTGGGACGGGAGGAAGGAGACTCCTACTATCCAACTCAACGGAAACAACTACACCGTCCTGGACATCATCTACGACAGTTACATCATCGTGCTCGCGGACACCGATGCGCTCGGCGGCGGCAGCTGCCCCAGAGTGCGCCACAACGTCACCTTCGGCCAGGCCTACGAGTGGCTTCAATACACCGGCCCCAGTGACAACCTCACCTTCTTCTTCGGCTGCAACCTTCTACCACTACCACCAATGGATCCAGGGCTGACTCGTTTTGCAGACAAGTACCAAATCAACTGCAAAGACTTCAGCAACGGGCCTAACGGTGGAGATTCATTTGTGTTCACCTCCGGCGAGCTTGATCCAAAAACAGAGTCCGAATTGGACAGGCGCTGCAGCCAGATCATCGTCGTGCCGGTAAATGGGACTATACTTAATTTAAGTAACCAGAGTGCGCTGCCAAGTGGTGAATACGGTCAAGTGCTTAAGAAGGGGTTCGAGCTGGCATGGACCTCAAGGAAAGATGAACAATGCTACCAGTGCGAGCGATTCCAGGGACAGTGTGCCTACAGCCAGAACCGGATATTCCAAGGATGCTTGTGCGCTGATGGGAAGGTGAGCAGCCAGGATTGCAGAAACAGCGGAATCAACAGTAAGTCCTGCAAATTTGATTTTTTTTTAGAACTTTGTAACAATATCAAACCAACTATTAGTCACTTACTTGAAATATCATCCAAACGTCCAAGTGCATGACACCTCCGTCATTTGCTTATACTTTGTAGACCCCTAAAATCGTATGTATCTTTCCCGTTCAGATACAGTAATCCAAAAAGGAAATTATCCCGTACAAAAGAAGTGTAAAATCCGTCTTGAGCATTATGTGGACGTCGATACGCACCGTGTCTCGACGGAGCAAAATGGAAGACCGTAG
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| CDS seq | ATGGTTCTCCCACCGCGTTTGCTCCCCTTCTTCCTCCTCATCGGCGTCCTTTCCCATGGCTCGCCTCTCGCACCCACTTACAACACTTCCATTTGCTCCAAATCATACGAGTGTGGAGGCGTCAATATCTCCTACCCTTTCTATCTTTCCAACGCAATCGGCGGAACCTACGGTTACGCTCCCTTCTCTTGCGGCTACACCGATCTGGATATCACTTGCAGCTGGGACGGGAGGAAGGAGACTCCTACTATCCAACTCAACGGAAACAACTACACCGTCCTGGACATCATCTACGACAGTTACATCATCGTGCTCGCGGACACCGATGCGCTCGGCGGCGGCAGCTGCCCCAGAGTGCGCCACAACGTCACCTTCGGCCAGGCCTACGAGTGGCTTCAATACACCGGCCCCAGTGACAACCTCACCTTCTTCTTCGGCTGCAACCTTCTACCACTACCACCAATGGATCCAGGGCTGACTCGTTTTGCAGACAAGTACCAAATCAACTGCAAAGACTTCAGCAACGGGCCTAACGGTGGAGATTCATTTGTGTTCACCTCCGGCGAGCTTGATCCAAAAACAGAGTCCGAATTGGACAGGCGCTGCAGCCAGATCATCGTCGTGCCGGTAAATGGGACTATACTTAATTTAAGTAACCAGAGTGCGCTGCCAAGTGGTGAATACGGTCAAGTGCTTAAGAAGGGGTTCGAGCTGGCATGGACCTCAAGGAAAGATGAACAATGCTACCAGTGCGAGCGATTCCAGGGACAGTGTGCCTACAGCCAGAACCGGATATTCCAAGGATGCTTGTGCGCTGATGGGAAGGTGAGCAGCCAGGATTGCAGAAACAGCGGAATCAACAATACAGTAATCCAAAAAGGAAATTATCCCGTACAAAAGAAGTGTAAAATCCGTCTTGAGCATTATGTGGACGTCGATACGCACCGTGTCTCGACGGAGCAAAATGGAAGACCGTAG
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| Protein seq | MVLPPRLLPFFLLIGVLSHGSPLAPTYNTSICSKSYECGGVNISYPFYLSNAIGGTYGYAPFSCGYTDLDITCSWDGRKETPTIQLNGNNYTVLDIIYDSYIIVLADTDALGGGSCPRVRHNVTFGQAYEWLQYTGPSDNLTFFFGCNLLPLPPMDPGLTRFADKYQINCKDFSNGPNGGDSFVFTSGELDPKTESELDRRCSQIIVVPVNGTILNLSNQSALPSGEYGQVLKKGFELAWTSRKDEQCYQCERFQGQCAYSQNRIFQGCLCADGKVSSQDCRNSGINNTVIQKGNYPVQKKCKIRLEHYVDVDTHRVSTEQNGRP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0473300 | OsMH63_01T0473300.1 | Chr01 | 30319453 | 30320593 | + | maker | ||
| CDS seq | ATGGTTCTCCCACCGCGTTTGCTCCCCTTCTTCCTCCTCATCGGCGTCCTTTCCCATGGCTCGCCTCTCGCACCCACTTACAACACTTCCATTTGCTCCAAATCATACGAGTGTGGAGGCGTCAATATCTCCTACCCTTTCTATCTTTCCAACGCAATCGGCGGAACCTACGGTTACGCTCCCTTCTCTTGCGGCTACACCGATCTGGATATCACTTGCAGCTGGGACGGGAGGAAGGAGACTCCTACTATCCAACTCAACGGAAACAACTACACCGTCCTGGACATCATCTACGACAGTTACATCATCGTGCTCGCGGACACCGATGCGCTCGGCGGCGGCAGCTGCCCCAGAGTGCGCCACAACGTCACCTTCGGCCAGGCCTACGAGTGGCTTCAATACACCGGCCCCAGTGACAACCTCACCTTCTTCTTCGGCTGCAACCTTCTACCACTACCACCAATGGATCCAGGGCTGACTCGTTTTGCAGACAAGTACCAAATCAACTGCAAAGACTTCAGCAACGGGCCTAACGGTGGAGATTCATTTGTGTTCACCTCCGGCGAGCTTGATCCAAAAACAGAGTCCGAATTGGACAGGCGCTGCAGCCAGATCATCGTCGTGCCGGTAAATGGGACTATACTTAATTTAAGTAACCAGAGTGCGCTGCCAAGTGGTGAATACGGTCAAGTGCTTAAGAAGGGGTTCGAGCTGGCATGGACCTCAAGGAAAGATGAACAATGCTACCAGTGCGAGCGATTCCAGGGACAGTGTGCCTACAGCCAGAACCGGATATTCCAAGGATGCTTGTGCGCTGATGGGAAGGTGAGCAGCCAGGATTGCAGAAACAGCGGAATCAACAATACAGTAATCCAAAAAGGAAATTATCCCGTACAAAAGAAGTGTAAAATCCGTCTTGAGCATTATGTGGACGTCGATACGCACCGTGTCTCGACGGAGCAAAATGGAAGACCGTAG
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| Protein seq | MVLPPRLLPFFLLIGVLSHGSPLAPTYNTSICSKSYECGGVNISYPFYLSNAIGGTYGYAPFSCGYTDLDITCSWDGRKETPTIQLNGNNYTVLDIIYDSYIIVLADTDALGGGSCPRVRHNVTFGQAYEWLQYTGPSDNLTFFFGCNLLPLPPMDPGLTRFADKYQINCKDFSNGPNGGDSFVFTSGELDPKTESELDRRCSQIIVVPVNGTILNLSNQSALPSGEYGQVLKKGFELAWTSRKDEQCYQCERFQGQCAYSQNRIFQGCLCADGKVSSQDCRNSGINNTVIQKGNYPVQKKCKIRLEHYVDVDTHRVSTEQNGRP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.004784 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0690800 | SBH | 0.271877 | 0.187419 | 1.252418 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g49529 | SBH | 5.360261 | 4.531853 | 2.889536 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0690800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0029790 | RBH | 0.000000 | 1.764930 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0029380 | RBH | 0.179609 | 0.619829 | 1.279307 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0029760 | SBH | 0.065632 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0029000 | RBH | 0.070262 | 0.030125 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0028670 | SBH | 1.398517 | 0.733760 | 3.513491 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0424800 | RBH | 0.008057 | 1.7846005 | 0.089048 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028410 | RBH | 0.043897 | 0.0 | 0.334089 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0462500 | RBH | 0.395228 | 5.761827 | 0.0819505 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0028680 | RBH | 0.064538 | 0.374204 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0028570 | RBH | 0.235843 | 0.388253 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0028850 | RBH | 4.082591 | 2.877311 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0029010 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0028830 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029280 | RBH | 0.032010 | 0.338633 | 0.148234 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0028940 | SBH | 0.0 | 0.0 | 0.0 |
