Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0411700 | OGI:01011440 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:26380004-26383133 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACTTGTGTTGCTGTTGCTGCATTGAACATATGTGATGGCTGAGTTTTTATACATATACAGATTTGGTTCCAGAATGTTTGCTTGCAAAATGGCAAAAGAAGGCTAAACCTGACTGTTGTGCTGTCAATTTGTGAGCAGATCTGAACATGCTTATAAACTAACTTCTCCAGGGCAGACTTTTTTGCTTGCTTGCAAAATGCCAAAAAAAAGAAGAGCACAACTGAACATGCATACAAACTAACTTGTCCAGGACAGACTTGTTTTCTTGCTTGCAAAATGACTAAAAAACATAAGTACTTCACCAGGACACAAGCTCTTCAGTAAAACCATCATCTGTGATTGGTCACTGTAAAAAAAACAAAAATAAGTAAGATTTTTCTAAACATTATCTCCTCTAGATTTGTAAACTAACTTACTGTCAACAGTTGAGTGAAGCTATCAATGGCCTCGTAATCTTCAGGCTCCTTCCATTTATCCATAGGAGCACTATCATCTGCAAGTTGTTCTTCTGCATCACCTACCTCTTCCCTAACCTTTTGTATCTTGCAGACAAAGAAAATTTGAGGGTTTAGAGAAATAATGGACAGAATGATAACACTGGAAACATAATTGTTCTTCAGCAACATACCACTGATTTTTTTGTTTTGTTTTTTCATTTTTTTCCTCTCTTTTTCCTAGTCTTCTGGTTTTTATCGAGCCAACCTCTTGTTCGTTTTGAACTTCTTGTTTTGACCTCCTTTTTCTTTAGACGTGCATTACTCAACAAGTCATTTGGTGGACTAACATCTGTCTGAACTGTACATGGATCCTCAGAAATGCTTGTACATGCACTGATTTTGTCTTCAATTTGCTTACCAAGGATGTCAAGTGCACTGTCTACTAACATGGTGCACTCTGGAAAGTTGGCTGCTCGATGTGCTAAATTGAGAAATTTGTGGGACATAAACCTGTAGCGAAGCATAGCATCCATGTTTGGATTTTCGATTATATTTCTCCCCAAATTGTCTTGTATAGTTCCACTCCTTGCTTCTCGTGTCCATCGCTTCAGCACGTAGTGTGGTGGTAATGACTTGATATTCATCAAATCAAGAACTTTCAGAGCATGGGCACACAATATCCCAATTCTATCGAATCGCCTGCAGCTACATTGAACTGTTTGCTTCAAAGGATCTCCAATAACTTTGTACTCCTCCTCATAGGTGAAATCTCCTATTAGATATTCATTGTTACCATCCAATTCCTTGCTGCAAGCTGCCAAGGATTTTTCATATTCACCTTGAAAAGCTTCAAATATAATAGGTGTATACAACTTGCTAGCTTGCACCAACATAGGTGGTGGCCTCCGCATACAGATTTTAGGCAACTTTTTCCTTGATTCAAATTCTGAATTCAGTTTAGTATTCCTTTTTCCTTGCACCACCCTTTCAAAATGCTTAAAGAACCGGATGATATCAAAATCAGATTTAAAATGGTTTTTCAAGTCATTATTTAGACTTTCACTCAATTGTGTACTTCTCATTCCTAATGTGAAGACATCTTTCATATAGCATTCGGCCCATTTTTCTTTCAACTTGTATATACTATCCAACCAGGTTTGCTTGCTCACTTTTGCCCTCATGATGTCAAATTTTTGTTCAAATGCTGCCATGTCTTCGTACTCATATATGCATGCACTAAAATCTGACAGAACACTTGTGTCTTCATTGCTCTCCTCATTCTTCACTCCACCTAAATGTTTGATTGCATAATGTGGAAGGTGCATAATCCATGCCACGCTTCTGAAAACACTTCTGCAACTGCCTTTCCCATTGCCAAATCTTGGTCGGTATAGATTGTTTTAGGCTGCTGTCCATTATGAGCTTTTAGAAAGGTCTCAAACAACCATTTGAGGACTCAAAAGTCTCATCATACATGAGAGCAGCACTAAAAATTACAGTTTCTCTAAAGTGATTGAACCCCACAAAGACACCAAAAGGCCTACTCTCATTGTTTGTTCCAAAAGTAGTATCAAAACTAACAACATCACCAAAACGTGCGTAGTCTGCGATCATTTTAGCATCAGCCCAAAATATGTTCGCTATTTGTTCTTCACAATCCATTTGCAATGCATATTGGAATGATGGGTTCTCAGCAATTTTGTCTTGAAAATACTTAAGCATGCTACCTGCTTGGCCATATGCCATCTCCCGTTGTTGCTTGGTCCGTAGATAGTTCCTATGATCTCGGAGTGTGTAGCTAAGGTTGAGGGATCCACCAACTTGGCGACTAGCCAACTCATGTGCCGCTTTCGGTCCTATTCCTGCATCATCGGCTGTTTCAATTTGAAAAGCTTGCAAATCTGAAATTTTTCTTTGTGACACCATTAAATGTATGGTTTCCGGCAAGTGTAGTGCATGGTTGTGTTCCAATATCAGATCAGACACTATATAATTTCCCTTCTTTCTATTCATTTTGAGATTCATGTGGACTTGACAATCGGTTCTAGTTTCAGCTCGAGGACACTTGGTTAAATGATCCCTTTTGTCTTGCAATCGATGACCTTCATTTGCACAAACAAATCTACATGATGTAACACTGCCATCCGACTTGCTTCTGTTTGTATACCTTTTTCTAACCTCAAAACCTTTCTGCCCACTGTAGCTAAGCCAAAATGCCCAAGCCTCATCTGAATTTGTAAATTCCATGCCAACCCGAGGTACCAAACCAGGCATCAAGTTATCTCTGTATTAAAAAAAAACTAATGAGTATGAAACTAGTGCATAGATATGCTGACCAAAAATCGCCAAAACCATGCTGTAAACATTGATTACATATTAGCACACATTACATGCTGTCCATGGCCTTGTATAATTGTATTACACACCAATGTGCTTCCATCGCAGGACTGTTTGACATTGTTTGATGGCAGGTCTCGGCAAGATTTTCAGCTAGCTGCTTCTTCCATGAGAAAAGGGGAAACTTGATCGATTTCAAAGCAACCTAATGGTGGAAGTTTGATTCAGTGAGCCATTCATGAGAAGTAGAGGCCTAGAGGGCATAAGAGAGGGTTTAGACTTACAAGATTGAAGTGCAGAAAAGCTCCTATCCGGCGATCACCTCCTCCACTCACGCCAAAACTTAACAAAACT
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| CDS seq | ATGTCAAACAGTCCTGCGATGGAAGCACATTGGTGTGTAATACAATTATACAAGGCCATGGACAGCATAGATAACTTGATGCCTGGTTTGGTACCTCGGGTTGGCATGGAATTTACAAATTCAGATGAGGCTTGGGCATTTTGGCTTAGCTACAGTGGGCAGAAAGGTTTTGAGGTTAGAAAAAGGTATACAAACAGAAGCAAGTCGGATGGCAGTGTTACATCATGTAGATTTGTTTGTGCAAATGAAGGTCATCGATTGCAAGACAAAAGGGATCATTTAACCAAGTGTCCTCGAGCTGAAACTAGAACCGATTGTCAAGTCCACATGAATCTCAAAATGAATAGAAAGAAGGGAAATTATATAGTGTCTGATCTGATATTGGAACACAACCATGCACTACACTTGCCGGAAACCATACATTTAATGGTGTCACAAAGAAAAATTTCAGATTTGCAAGCTTTTCAAATTGAAACAGCCGATGATGCAGGAATAGGACCGAAAGCGGCACATGAGTTGGCTAGTCGCCAAGTTGGTGGATCCCTCAACCTTAGCTACACACTCCGAGATCATAGGAACTATCTACGGACCAAGCAACAACGGGAGATGGCATATGGCCAAGCAGGTAGCATGCTTAAGTATTTTCAAGACAAAATTGCTGAGAACCCATCATTCCAATATGCATTGCAAATGGATTGTGAAGAACAAATAGCGAACATATTTTGGGCTGATGCTAAAATGATCGCAGACTACGCACGTTTTGGTGATGTTGTTAGTTTTGATACTACTTTTGGAACAAACAATGAGAGTAGGCCTTTTGGTGTCTTTGTGGGGTTCAATCACTTTAGAGAAACTGTAATTTTTAGTGCTACCTTTCTAAAAGCTCATAATGGACAGCAGCCTAAAACAATCTATACCGACCAAGATTTGGCAATGGGAAAGGCAGTTGCAGAAGTGTTTTCAGAAGCGTGGCATGGATTATGCACCTTCCACATTATCAATGAAGACACAAGTGTTCTGTCAGATTTTAGTGCATGCATATATGAGTACGAAGACATGGCAGCATTTGAACAAAAATTTGACATCATGAGGGCAAAAGTGAGCAAGCAAACCTGGTTGGATAGTATATACAAGTTGAAAGAAAAATGGGCCGAATGCTATATGAAAGATGTCTTCACATTAGGAATGAGAAGTACACAATTGAGTGAAAGTCTAAATAATGACTTGAAAAACCATTTTAAATCTGATTTTGATATCATCCGGTTCTTTAAGCATTTTGAAAGGGTGGTGCAAGGAAAAAGGAATACTAAACTGAATTCAGAATTTGAATCAAGGAAAAAGTTGCCTAAAATCTGTATGCGGAGGCCACCACCTATGTTGGTGCAAGCTAGCAAGTTGTATACACCTATTATATTTGAAGCTTTTCAAGGTGAATATGAAAAATCCTTGGCAGCTTGCAGCAAGGAATTGGATGGTAACAATGAATATCTAATAGGAGATTTCACCTATGAGGAGGAGTACAAAGTTATTGGAGATCCTTTGAAGCAAACAGTTCAATGTAGCTGCAGGCGATTCGATAGAATTGGGATATTGTGTGCCCATGCTCTGAAAGTTCTTGATTTGATGAATATCAAGTCATTACCACCACACTACGTGCTGAAGCGATGGACACGAGAAGCAAGGAGTGGAACTATACAAGACAATTTGGGGAGAAATATAATCGAAAATCCAAACATGGATGCTATGCTTCGCTACAGGTTTATGTCCCACAAATTTCTCAATTTAGCACATCGAGCAGCCAACTTTCCAGAGTGCACCATGTTAGTAGACAGTGCACTTGACATCCTTGGTAAGCAAATTGAAGACAAAATCAGTGCATGTACAAGCATTTCTGAGGATCCATGTACAGTTCAGACAGATGTTAGTCCACCAAATGACTTGTTGAGTAATGCACGTCTAAAGAAAAAGGAGGTCAAAACAAGAAGTTCAAAACGAACAAGAGGTTGGGAAGAGGTAGGTGATGCAGAAGAACAACTTGCAGATGATAGTGCTCCTATGGATAAATGGAAGGAGCCTGAAGATTACGAGGCCATTGATAGCTTCACTCAACTGTTGACACAACAGCAACACAAGTGA
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| Protein seq | MSNSPAMEAHWCVIQLYKAMDSIDNLMPGLVPRVGMEFTNSDEAWAFWLSYSGQKGFEVRKRYTNRSKSDGSVTSCRFVCANEGHRLQDKRDHLTKCPRAETRTDCQVHMNLKMNRKKGNYIVSDLILEHNHALHLPETIHLMVSQRKISDLQAFQIETADDAGIGPKAAHELASRQVGGSLNLSYTLRDHRNYLRTKQQREMAYGQAGSMLKYFQDKIAENPSFQYALQMDCEEQIANIFWADAKMIADYARFGDVVSFDTTFGTNNESRPFGVFVGFNHFRETVIFSATFLKAHNGQQPKTIYTDQDLAMGKAVAEVFSEAWHGLCTFHIINEDTSVLSDFSACIYEYEDMAAFEQKFDIMRAKVSKQTWLDSIYKLKEKWAECYMKDVFTLGMRSTQLSESLNNDLKNHFKSDFDIIRFFKHFERVVQGKRNTKLNSEFESRKKLPKICMRRPPPMLVQASKLYTPIIFEAFQGEYEKSLAACSKELDGNNEYLIGDFTYEEEYKVIGDPLKQTVQCSCRRFDRIGILCAHALKVLDLMNIKSLPPHYVLKRWTREARSGTIQDNLGRNIIENPNMDAMLRYRFMSHKFLNLAHRAANFPECTMLVDSALDILGKQIEDKISACTSISEDPCTVQTDVSPPNDLLSNARLKKKEVKTRSSKRTRGWEEVGDAEEQLADDSAPMDKWKEPEDYEAIDSFTQLLTQQQHK |
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| Function | Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0411700 | OsMH63_01T0411700.1 | Chr01 | 26380004 | 26383133 | - | maker | ||
| CDS seq | ATGTCAAACAGTCCTGCGATGGAAGCACATTGGTGTGTAATACAATTATACAAGGCCATGGACAGCATAGATAACTTGATGCCTGGTTTGGTACCTCGGGTTGGCATGGAATTTACAAATTCAGATGAGGCTTGGGCATTTTGGCTTAGCTACAGTGGGCAGAAAGGTTTTGAGGTTAGAAAAAGGTATACAAACAGAAGCAAGTCGGATGGCAGTGTTACATCATGTAGATTTGTTTGTGCAAATGAAGGTCATCGATTGCAAGACAAAAGGGATCATTTAACCAAGTGTCCTCGAGCTGAAACTAGAACCGATTGTCAAGTCCACATGAATCTCAAAATGAATAGAAAGAAGGGAAATTATATAGTGTCTGATCTGATATTGGAACACAACCATGCACTACACTTGCCGGAAACCATACATTTAATGGTGTCACAAAGAAAAATTTCAGATTTGCAAGCTTTTCAAATTGAAACAGCCGATGATGCAGGAATAGGACCGAAAGCGGCACATGAGTTGGCTAGTCGCCAAGTTGGTGGATCCCTCAACCTTAGCTACACACTCCGAGATCATAGGAACTATCTACGGACCAAGCAACAACGGGAGATGGCATATGGCCAAGCAGGTAGCATGCTTAAGTATTTTCAAGACAAAATTGCTGAGAACCCATCATTCCAATATGCATTGCAAATGGATTGTGAAGAACAAATAGCGAACATATTTTGGGCTGATGCTAAAATGATCGCAGACTACGCACGTTTTGGTGATGTTGTTAGTTTTGATACTACTTTTGGAACAAACAATGAGAGTAGGCCTTTTGGTGTCTTTGTGGGGTTCAATCACTTTAGAGAAACTGTAATTTTTAGTGCTACCTTTCTAAAAGCTCATAATGGACAGCAGCCTAAAACAATCTATACCGACCAAGATTTGGCAATGGGAAAGGCAGTTGCAGAAGTGTTTTCAGAAGCGTGGCATGGATTATGCACCTTCCACATTATCAATGAAGACACAAGTGTTCTGTCAGATTTTAGTGCATGCATATATGAGTACGAAGACATGGCAGCATTTGAACAAAAATTTGACATCATGAGGGCAAAAGTGAGCAAGCAAACCTGGTTGGATAGTATATACAAGTTGAAAGAAAAATGGGCCGAATGCTATATGAAAGATGTCTTCACATTAGGAATGAGAAGTACACAATTGAGTGAAAGTCTAAATAATGACTTGAAAAACCATTTTAAATCTGATTTTGATATCATCCGGTTCTTTAAGCATTTTGAAAGGGTGGTGCAAGGAAAAAGGAATACTAAACTGAATTCAGAATTTGAATCAAGGAAAAAGTTGCCTAAAATCTGTATGCGGAGGCCACCACCTATGTTGGTGCAAGCTAGCAAGTTGTATACACCTATTATATTTGAAGCTTTTCAAGGTGAATATGAAAAATCCTTGGCAGCTTGCAGCAAGGAATTGGATGGTAACAATGAATATCTAATAGGAGATTTCACCTATGAGGAGGAGTACAAAGTTATTGGAGATCCTTTGAAGCAAACAGTTCAATGTAGCTGCAGGCGATTCGATAGAATTGGGATATTGTGTGCCCATGCTCTGAAAGTTCTTGATTTGATGAATATCAAGTCATTACCACCACACTACGTGCTGAAGCGATGGACACGAGAAGCAAGGAGTGGAACTATACAAGACAATTTGGGGAGAAATATAATCGAAAATCCAAACATGGATGCTATGCTTCGCTACAGGTTTATGTCCCACAAATTTCTCAATTTAGCACATCGAGCAGCCAACTTTCCAGAGTGCACCATGTTAGTAGACAGTGCACTTGACATCCTTGGTAAGCAAATTGAAGACAAAATCAGTGCATGTACAAGCATTTCTGAGGATCCATGTACAGTTCAGACAGATGTTAGTCCACCAAATGACTTGTTGAGTAATGCACGTCTAAAGAAAAAGGAGGTCAAAACAAGAAGTTCAAAACGAACAAGAGGTTGGGAAGAGGTAGGTGATGCAGAAGAACAACTTGCAGATGATAGTGCTCCTATGGATAAATGGAAGGAGCCTGAAGATTACGAGGCCATTGATAGCTTCACTCAACTGTTGACACAACAGCAACACAAGTGA
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| Protein seq | MSNSPAMEAHWCVIQLYKAMDSIDNLMPGLVPRVGMEFTNSDEAWAFWLSYSGQKGFEVRKRYTNRSKSDGSVTSCRFVCANEGHRLQDKRDHLTKCPRAETRTDCQVHMNLKMNRKKGNYIVSDLILEHNHALHLPETIHLMVSQRKISDLQAFQIETADDAGIGPKAAHELASRQVGGSLNLSYTLRDHRNYLRTKQQREMAYGQAGSMLKYFQDKIAENPSFQYALQMDCEEQIANIFWADAKMIADYARFGDVVSFDTTFGTNNESRPFGVFVGFNHFRETVIFSATFLKAHNGQQPKTIYTDQDLAMGKAVAEVFSEAWHGLCTFHIINEDTSVLSDFSACIYEYEDMAAFEQKFDIMRAKVSKQTWLDSIYKLKEKWAECYMKDVFTLGMRSTQLSESLNNDLKNHFKSDFDIIRFFKHFERVVQGKRNTKLNSEFESRKKLPKICMRRPPPMLVQASKLYTPIIFEAFQGEYEKSLAACSKELDGNNEYLIGDFTYEEEYKVIGDPLKQTVQCSCRRFDRIGILCAHALKVLDLMNIKSLPPHYVLKRWTREARSGTIQDNLGRNIIENPNMDAMLRYRFMSHKFLNLAHRAANFPECTMLVDSALDILGKQIEDKISACTSISEDPCTVQTDVSPPNDLLSNARLKKKEVKTRSSKRTRGWEEVGDAEEQLADDSAPMDKWKEPEDYEAIDSFTQLLTQQQHK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.038596 | 0.000421 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0571900 | SBH | 0.0 | 0.0 | 0.441314 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g12670 | SBH | 0.0 | 0.0 | 0.189638 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0852650 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024680 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023970 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0040020 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023450 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0390500 | SBH | 0.040957 | 0 | 0.0112565 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0040050 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0040000 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0040240 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0020560 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023760 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023990 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023720 | SBH | 0.0 | 0.0 | 0.0 |
