Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0243400 | OGI:01044490 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:15025901-15030365 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AACAACCCTAACTCCCTTCCCCAAACCCTAGCCGCCACCGTTCCTCCGCCTCCTCTCCTCCTCTCGCTCCGCTCTCTCCCTGCCCAAGCGACGGCCGTCGCCGCGTGCCGCTCCCCTCATCCTCTTCTTCCCACAGGTGACGACCTCCCCCGCGCGCTCTCTGCTGCCGTGCCCGCCACCGCCCGACACGCGGGCCGCTGCCGTCGCCATCCTCTCGCTCCTGCCGCCGCATCCGCCAACAAGGAGGCCGGGACCGCCGGATCCGGTGACTCCGGCCTCCTCGCCGGCAGATCCGGCCGTTGTGAGGGGAGGGGAAGCCGGCAGCTGCCCTCTACGCCCGGCACCGCCCCTCTCTCCCTCTCCATCCTCTTCGTTTCTGGATCGGCGGACGCCTGCGATTAGGCGGCCTAGGGCTCATGGTCAACAGGGACACACCGCTGTATAGAAGTCCAGCTGCTCCGAAAGATTATCTTCACCCGCAGCCCCCTGTTGTTGCCTTGAGCTACTTGGTCAGTTGAGTGCCTTCTTCTTTAATGTTTGTTTCTCTAATTTTTGAAGAATGGTGATGGATAGAAATAGGAAATGAAAGAATGCACTTTTGACAGGTTATTGGTTATTCAAGTACACCAGAAATGACCCTATTTAGCACAAAGTTGATTGAATGATTGAGATGTATTTCTTGCTTTGTCACAGCTGTTTCACTCTCTTCGGTCATAACAAGGGAGGTGGACTTCATCATTAATTTTTTGCTTAATAATGTATTAGTAGACTTCTCCCCCTATTTTGTAAGTAATAGCTGTTGCTTAAGGCTATTGTGTAATGCTATATACAGATAGCAAGTTTGTACTTTACAAAATCCTTCCTGTAGATGGTGATTAATATCTGCTCTAGAATTTAAATAGCAGCTTTCGTTTTTCCTGCCTTGCATTCATGGTAGAGATCGCATGGACAAAGAGTTGTAACCTTTTAAGTAAACCTTTCTATTTCTGATTTACTCACCTTTTTTTTTCCCTTAGGTATATAGCTGGCCCCAAAACATATATGCTTTTCTCCAATAACAACAAATTAAGATGCATTTCATCCGTTCTTGCGCAGTTCCAGTAGAGCTAAATGAACACTGGGTTTAATTATTTTGTGCGGAACTCAACTGCAACTTAATATTTACATAAATTCAGTAACCGTTGCTTCTCCGCACACACACAACAATAAGCGTTCTTTTTGGCACAAATCTGATGATGCTTCTACAGCTTACTGCCTCTGCAGCGAAGTCTAGCCAATCTGGAAGATTGACAAAATTGATTGCTTGCAGAACAAATGAGTAAGCAGTGCAATACACCCATTCTCACTTTATCTTTACACATGGGTCTTAGTGGTGTTGTATCGGATGTTTCAGTGTATGTAATTCTAGCTGATGCCATTTTCTCTCTATTTTCTCTCTTTGTTGCAATTAGCAATGACCTGATTGGGAGAAGTAGGTAAATCTGAGCTGGCTTTGACATGTAGTAGTGTGGCTTTTGCTTCATCAAACAAGTGCATCATCATAATATGGATGTCCTGAGAGGACTGCTGGACAGGCAATGCTGCTGTGGTGGTGAAAGTATTATGCATAACATTCCTTATTTTTGCTTTCAAAATGTTAATCAGGTACATCACGATGTTTTTTCCTGTACATTTCCGATATGTGCTCTGATTACTGCCGGTAAATGCTTTTTTCCTCAATGTACAAATCATGTTGCCTCACTGTGATGCTCTGCTCATCCATTACATTGGTTATATGCCAATTGCTTTACTTCTTTATAACTCCATTGATGCGGTAGCTAATGTCATATGCTCGCAATATCTTACTTTTTACCTTCTTTGATCTAATAAATAAAGTATAACCTTGGTCTTTTTATAAAACAATCCTTTTCCAATGAGCACTTATGATAACTATGTACCTCCATGCTTGAAATAGAAGATCATGCCTTTATTAACAGTATATGCTTATGAGAACTGACATTAATTTTCCCTTAGGAATAGCTGGCTTCAAAACCCATGCCTTTTTTCCCCATAACGACAAGTTTAGATGCATTTTTCATCCTTTCTTGCACAGTTCTACTGGATCTGAACGTACCACTGGGTATTTTGTACATAATTCAAATGCGACTTAATGTTTGCATAAAATCAGTCTCCATTGAAGTGAGGTTTAATATTTATGAAATATATTATAGATGCTTGGGCATGATGTGCTGTAAATTTAGAGGGGTTAGTTTGTGCTATCTGGACGAAATGTTATATATTAGCAACAGAAAACAGCAGCCGAAATATTTTTCGTTTCAAATACTCGAGCTATATGTACTTTTTATAATATGAACATGCTGATGAGTGTTTTTGACATTGTGGCCATCTCTCCTGTGATTTTGCTCCAAATTCTATAAATGGAGAACTTTTCCTTTACTTGAATTTCTCTGTTCCAAACTTGAATACTTAATTTAATTGTTTTTTTTCTTTTCTACCATATATCTTGTATTTTCTTTTTGGTCAGATCTATATCATAGATTACACCATTTACGATATAATTCATGTGCCTCATTCTTGGTTTCAGATTGCTCAAACTAACAGTACTACATTTGAGAGCCTCAATTTTTATTGCCATCACCTGGGTGGATGTGTGCGGTAGTTTGTGGTAAGTCCAATGAATTTGCAGTGGGAATGGACTGCTCCTGGTACATAACTTCTTCCCGAGATTGGTTTTATACCTTATATCCCTTCTTAATAAAGTGATAGTGAATACAGTTATGATTGGCCACTCCTTTGTTTTAATTTGTAAGGTCCCTGGTGGTTGCTTTTTATTTCATTTCAATAAATGATTACAGAAAAAAAATATATTGATAAAGTATATGCCATTTGTTGATTCCATTTTATTGTATAGCTTTAGAACGAGGTGGCTGAACTGACCTTCTGATTGCTTCCTACAAATGAAGACGGTTTTACAGTGTTGCTCCTCTCCCAGCCTCCCACCTTCATCACTGACCTTTCCCTGATATGCAATCTCATTTGTTTGCCATTGCCCCTGTGTTTCATAAATATATTTAATCCCTGTGATTCAGGGCTTCCTGATTTGAATTTTCAAGGAAAGCATTGACATTAGGTGGTTAATACTATCCAGCTTAACTCTCTAATCAGTCACGCGCAGTCTGGATTTAGAGTGTGTTTGGTTACTGCCCTGAGAATCACGCCTGACTCAGGCATCGATCTCAGCGTTCGACGTCGTTCGCCTTCGGCTGGATCGACCTGCTTGAGAGCACTCAGGTGAGGGCAACAACCAAACAGCCTCTTAGAAATTTATGCTTCGTATGTTCTTAGTTCAATCTATGTTTTTACTTTGTCTTGCGATTTTACAAAATGTTGTGTATAAGTTTTTAGTTCAGAATAATTAAACGAACATGGCTACTTCTATTGTTACTGACAAAATTCAGTGGCGCCCTATGTTGATTGTTTATTCTTTTGACAAGGTCGGGAGAAGTGATGGACGGAGAATATCCAGTGTCAATGTTTTTCAATTGCACTTACAAAACTTATAAAAAATGTTTGCTCACAGGCCGGCAATAGCACACGCAAATTCAACAATGTCTGCTTTTGCTGAAGGATACAAAAGTGACACCTGACATCAAGAACTACACCGACATTATTGGACAGTTCCTCCTTCAAACAAGTTCTACATTGTGACTATGAACAATACATTCATGAAGCAAGATAGAATAGTAAGCTCACTTACACTAGACAACCATTGCTCTCTTCATGCCTTTGACAAAGAAATAACATGAAATTCAAATTACAGTACTTTGCTAAGGAATATCAAAGACCTACATTCAGCCACTCATGGGAGGTCGAAAAACCATGGACATTCAAGTTGAAGCAGCAGACAGAATTTCAGTCACCCTGACTCTACATGTTTCAACACATGGTCGTTGCAACTTAAAAAAAAGGATGGGCAACTTTTGCAGCGAACAATGGCATACATCTTCGGTCCGTTTACATCTTTCACTTCCACAAGGCACCTCAACTCCAAACGACAATAGATGTCTGCTAAATGCCATGTATATCGCCTATGCTATAGTGAAATCGTCCTTTTGTTAGCACTAAATTATCCCATTCATTTTAGTGCAGCAAAACTGCAAGCCTCCTCTACCACCGTTATGCTATGCTAATTAGCTTTGCACCTTAAGCACTAATGATCAGCACTCAACTCTATTGTAAATATGCAATGCCACCTACTACTACCCGCTAATATACTTGTATATGATCTATTTATCAATGCCTGCTTCCTTTCCCTTAATTTATTTCTCATATGCTTCTTTCAATATGCTCTCCTTTATCTTCAATCTTTAATATACAAACCTGCTGGGATTACTATACATATGTCCACTCTGTTTCTAACCTACTTGATTGCAGGCCGCGCGCCAACGGCGCGCTCCCCCTCTAG
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| CDS seq | AACAACCCTAACTCCCTTCCCCAAACCCTAGCCGCCACCGTTCCTCCGCCTCCTCTCCTCCTCTCGCTCCGCTCTCTCCCTGCCCAAGCGACGGCCGTCGCCGCGTGCCGCTCCCCTCATCCTCTTCTTCCCACAGGTGACGACCTCCCCCGCGCGCTCTCTGCTGCCGTGCCCGCCACCGCCCGACACGCGGGCCGCTGCCGTCGCCATCCTCTCGCTCCTGCCGCCGCATCCGCCAACAAGGAGGCCGGGACCGCCGGATCCGCTGCCCTCTACGCCCGGCACCGCCCCTCTCTCCCTCTCCATCCTCTTCGTTTCTGGATCGGCGGACGCCTGCGATTAGGCGGCCTAGGGCTCATGGTCAACAGGGACACACCGCTGTATAGAAGTCCAGCTGCTCCGAAAGATTATCTTCACCCGCAGCCCCCTGTTGTTGCCTTGAGCTACTTGCTTACTGCCTCTGCAGCGAAGTCTAGCCAATCTGGAAGATTGACAAAATTGATTGCTTGCAGAACAAATGAATTGCTCAAACTAACAGTACTACATTTGAGAGCCTCAATTTTTATTGCCATCACCTGGGTGGATGTGTGCGGTAGTTTGTGGCATCGATCTCAGCGTTCGACGTCGTTCGCCTTCGGCTGGATCGACCTGCTTGAGAGCACTCAGGATACAAAAGTGACACCTGACATCAAGAACTACACCGACATTATTGGACAGTTCCTCCTTCAAACAAGAATATCAAAGACCTACATTCAGCCACTCATGGGAGGTCGAAAAACCATGGACATTCAAGTTGAAGCAGCAGACAGAATTTCAGTCACCCTGACTCTACATGTTTCAACACATGGTCGTTGCAACTTAAAAAAAAGGATGGGCAACTTTTGCAGCGAACAATGGCATACATCTTCGGTCCGTTTACATCTTTCACTTCCACAAGGCACCTCAACTCCAAACGACAATAGATGTCTGCTAAATGCCATGTATATCGCCTATGCTATAGTGAAATCGCCGCGCGCCAACGGCGCGCTCCCCCTCTAG
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| Protein seq | NNPNSLPQTLAATVPPPPLLLSLRSLPAQATAVAACRSPHPLLPTGDDLPRALSAAVPATARHAGRCRRHPLAPAAASANKEAGTAGSAALYARHRPSLPLHPLRFWIGGRLRLGGLGLMVNRDTPLYRSPAAPKDYLHPQPPVVALSYLLTASAAKSSQSGRLTKLIACRTNELLKLTVLHLRASIFIAITWVDVCGSLWHRSQRSTSFAFGWIDLLESTQDTKVTPDIKNYTDIIGQFLLQTRISKTYIQPLMGGRKTMDIQVEAADRISVTLTLHVSTHGRCNLKKRMGNFCSEQWHTSSVRLHLSLPQGTSTPNDNRCLLNAMYIAYAIVKSPRANGALPL |
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| Function | Putative B3 domain-containing protein Os11g0625400 [UniProtKB/Swiss-Prot:Q2R0Z3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0243400 | OsMH63_01T0243400-mRNA-1 | Chr01 | 15025901 | 15030365 | + | maker | ||
| CDS seq | AACAACCCTAACTCCCTTCCCCAAACCCTAGCCGCCACCGTTCCTCCGCCTCCTCTCCTCCTCTCGCTCCGCTCTCTCCCTGCCCAAGCGACGGCCGTCGCCGCGTGCCGCTCCCCTCATCCTCTTCTTCCCACAGGTGACGACCTCCCCCGCGCGCTCTCTGCTGCCGTGCCCGCCACCGCCCGACACGCGGGCCGCTGCCGTCGCCATCCTCTCGCTCCTGCCGCCGCATCCGCCAACAAGGAGGCCGGGACCGCCGGATCCGCTGCCCTCTACGCCCGGCACCGCCCCTCTCTCCCTCTCCATCCTCTTCGTTTCTGGATCGGCGGACGCCTGCGATTAGGCGGCCTAGGGCTCATGGTCAACAGGGACACACCGCTGTATAGAAGTCCAGCTGCTCCGAAAGATTATCTTCACCCGCAGCCCCCTGTTGTTGCCTTGAGCTACTTGCTTACTGCCTCTGCAGCGAAGTCTAGCCAATCTGGAAGATTGACAAAATTGATTGCTTGCAGAACAAATGAATTGCTCAAACTAACAGTACTACATTTGAGAGCCTCAATTTTTATTGCCATCACCTGGGTGGATGTGTGCGGTAGTTTGTGGCATCGATCTCAGCGTTCGACGTCGTTCGCCTTCGGCTGGATCGACCTGCTTGAGAGCACTCAGGATACAAAAGTGACACCTGACATCAAGAACTACACCGACATTATTGGACAGTTCCTCCTTCAAACAAGAATATCAAAGACCTACATTCAGCCACTCATGGGAGGTCGAAAAACCATGGACATTCAAGTTGAAGCAGCAGACAGAATTTCAGTCACCCTGACTCTACATGTTTCAACACATGGTCGTTGCAACTTAAAAAAAAGGATGGGCAACTTTTGCAGCGAACAATGGCATACATCTTCGGTCCGTTTACATCTTTCACTTCCACAAGGCACCTCAACTCCAAACGACAATAGATGTCTGCTAAATGCCATGTATATCGCCTATGCTATAGTGAAATCGCCGCGCGCCAACGGCGCGCTCCCCCTCTAG
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| Protein seq | NNPNSLPQTLAATVPPPPLLLSLRSLPAQATAVAACRSPHPLLPTGDDLPRALSAAVPATARHAGRCRRHPLAPAAASANKEAGTAGSAALYARHRPSLPLHPLRFWIGGRLRLGGLGLMVNRDTPLYRSPAAPKDYLHPQPPVVALSYLLTASAAKSSQSGRLTKLIACRTNELLKLTVLHLRASIFIAITWVDVCGSLWHRSQRSTSFAFGWIDLLESTQDTKVTPDIKNYTDIIGQFLLQTRISKTYIQPLMGGRKTMDIQVEAADRISVTLTLHVSTHGRCNLKKRMGNFCSEQWHTSSVRLHLSLPQGTSTPNDNRCLLNAMYIAYAIVKSPRANGALPL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0243400 | OsMH63_01T0243400-mRNA-2 | Chr01 | 15025982 | 15030365 | + | maker | ||
| CDS seq | ATGGTCAACAGGGACACACCGCTGTATAGAAGTCCAGCTGCTCCGAAAGATTATCTTCACCCGCAGCCCCCTGTTGTTGCCTTGAGCTACTTGCTTACTGCCTCTGCAGCGAAGTCTAGCCAATCTGGAAGATTGACAAAATTGATTGCTTGCAGAACAAATGAATTGCTCAAACTAACAGTACTACATTTGAGAGCCTCAATTTTTATTGCCATCACCTGGGTGGATGTGTGCGGTAGTTTGTGGCATCGATCTCAGCGTTCGACGTCGTTCGCCTTCGGCTGGATCGACCTGCTTGAGAGCACTCAGGATACAAAAGTGACACCTGACATCAAGAACTACACCGACATTATTGGACAGTTCCTCCTTCAAACAAGAATATCAAAGACCTACATTCAGCCACTCATGGGAGGTCGAAAAACCATGGACATTCAAGTTGAAGCAGCAGACAGAATTTCAGTCACCCTGACTCTACATGTTTCAACACATGGTCGTTGCAACTTAAAAAAAAGGATGGGCAACTTTTGCAGCGAACAATGGCATACATCTTCGGTCCGTTTACATCTTTCACTTCCACAAGGCACCTCAACTCCAAACGACAATAGATGTCTGCTAAATGCCATGCCGCGCGCCAACGGCGCGCTCCCCCTCTAG
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| Protein seq | MVNRDTPLYRSPAAPKDYLHPQPPVVALSYLLTASAAKSSQSGRLTKLIACRTNELLKLTVLHLRASIFIAITWVDVCGSLWHRSQRSTSFAFGWIDLLESTQDTKVTPDIKNYTDIIGQFLLQTRISKTYIQPLMGGRKTMDIQVEAADRISVTLTLHVSTHGRCNLKKRMGNFCSEQWHTSSVRLHLSLPQGTSTPNDNRCLLNAMPRANGALPL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0243400 | OsMH63_01T0243400-mRNA-3 | Chr01 | 15025982 | 15030365 | + | maker | ||
| CDS seq | ATGGTCAACAGGGACACACCGCTGTATAGAAGTCCAGCTGCTCCGAAAGATTATCTTCACCCGCAGCCCCCTGTTGTTGCCTTGAGCTACTTGATTGCTCAAACTAACAGTACTACATTTGAGAGCCTCAATTTTTATTGCCATCACCTGGGTGGATGTGTGCGGCATCGATCTCAGCGTTCGACGTCGTTCGCCTTCGGCTGGATCGACCTGCTTGAGAGCACTCAGGATACAAAAGTGACACCTGACATCAAGAACTACACCGACATTATTGGACAGTTCCTCCTTCAAACAAGAATATCAAAGACCTACATTCAGCCACTCATGGGAGGTCGAAAAACCATGGACATTCAAGTTGAAGCAGCAGACAGAATTTCAGTCACCCTGACTCTACATGTTTCAACACATGGTCGTTGCAACTTAAAAAAAAGGATGGGCAACTTTTGCAGCGAACAATGGCATACATCTTCGGTCCGTTTACATCTTTCACTTCCACAAGGCACCTCAACTCCAAACGACAATAGATGTCTGCTAAATGCCATGCCGCGCGCCAACGGCGCGCTCCCCCTCTAG
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| Protein seq | MVNRDTPLYRSPAAPKDYLHPQPPVVALSYLIAQTNSTTFESLNFYCHHLGGCVRHRSQRSTSFAFGWIDLLESTQDTKVTPDIKNYTDIIGQFLLQTRISKTYIQPLMGGRKTMDIQVEAADRISVTLTLHVSTHGRCNLKKRMGNFCSEQWHTSSVRLHLSLPQGTSTPNDNRCLLNAMPRANGALPL |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0243400 | OsMH63_01T0243400-mRNA-4 | Chr01 | 15025982 | 15030365 | + | maker | ||
| CDS seq | ATGGTCAACAGGGACACACCGCTGTATAGAAGTCCAGCTGCTCCGAAAGATTATCTTCACCCGCAGCCCCCTGTTGTTGCCTTGAGCTACTTGCGTTCGACGTCGTTCGCCTTCGGCTGGATCGACCTGCTTGAGAGCACTCAGGATACAAAAGTGACACCTGACATCAAGAACTACACCGACATTATTGGACAGTTCCTCCTTCAAACAAGAATATCAAAGACCTACATTCAGCCACTCATGGGAGGTCGAAAAACCATGGACATTCAAGTTGAAGCAGCAGACAGAATTTCAGTCACCCTGACTCTACATGTTTCAACACATGGTCGTTGCAACTTAAAAAAAAGGATGGGCAACTTTTGCAGCGAACAATGGCATACATCTTCGGTCCGTTTACATCTTTCACTTCCACAAGGCACCTCAACTCCAAACGACAATAGATGTCTGCTAAATGCCATGCCGCGCGCCAACGGCGCGCTCCCCCTCTAG
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| Protein seq | MVNRDTPLYRSPAAPKDYLHPQPPVVALSYLRSTSFAFGWIDLLESTQDTKVTPDIKNYTDIIGQFLLQTRISKTYIQPLMGGRKTMDIQVEAADRISVTLTLHVSTHGRCNLKKRMGNFCSEQWHTSSVRLHLSLPQGTSTPNDNRCLLNAMPRANGALPL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.6169775 | 8.6632395 | 5.746596 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0020600 | RBH | 1.798389 | 10.012899 | 8.004105 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0015980 | RBH | 11.833102 | 23.168686 | 48.910770 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0088900 | RBH | 0.51277 | 11.3394135 | 6.762057 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020940 | RBH | 0.969617 | 0.560121 | 3.537962 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0094700 | SBH | 2.1451085 | 34.455635 | 6.750704 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0016170 | RBH | 34.109741 | 56.359505 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0020190 | RBH | 3.354925 | 0.0 | 3.497534 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
