Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0127400 | OGI:01024340 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:7958124-7961384 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTACCCGTCCTTCTGTTGAGGCACTTGCATTGGGCATATTGGCCATTTCGTGATGTTCATAGAATTCCATTTATAAGTCTTGTGTTCATCTTGTTTGGCATAACGAAGATACTTCTCTATTCCTTTGATCTGTTATATTGCAAAGAAATATAATTAGTTGTAGTGCTTTCAGAAGGGAAGTGTATGAAATGTGTTTTCATTATACCGTAGTGGTAAGGGTTTTTTCTGCATCATAGCTTGTCCTATCCATATGCAGTGAGTCCAGTATTTGGATTTTTTCATTGACACCATCCAGGACAGCTACATACCAGTGGGCCGAGTTTCTATTTAAGGGTAGGAAAATCTACATGCGGAATCATGAGTAAGAAATGTATTTTCACTTATGGATATAATGTATACGATGTATGTATTACCATTTCATGCTCTAAATAGCTGGCAGCAACTTTGGATCTTTGATCACGATATCTCTTGTTGCATGTACCTTTGTCTGTACCATTAATTTTCCACAGCTGGCATTGTGTTGCAGTTTCAAGGAGTGCAATTCCCTGTCCTCGTGGAGTGTCGGATTGCTTGTCTATGATGATTTGTATGTATGCATCTATGACCTGTCCAATAGCAGTGCATATTGTGAGTGTTTAATTATTCTGTTGTTGGTTAAATTAGAAGCAGGAGATAGCAGTGCTTACAGTGCCGTTCAACCACTTTGCTTTGGATGGAGCCTATTTTGGTAGGATAAGTGGTTTCAGATGCTGTCGAAAAATCTTGATTCCTGCAATTGTTGATAGCAATTTTTTGTCTTCACTCTTAGAGATGTAACTCAAGGTTACTTCATCCAGCAGGCTTAGATCATGTGGTTTCGGTTCCCTACTAGATTTAACTGGCTTTGGAAATGTTTTTTTGTAGTAGATGAAATCAGTTTGTGACTTGTGTGTTGGCTTGATAATCCTTCCCTCCGGTCGTCTAAGCCTTCCGCCAATTGTTGATAACTGCTGCAATGTACAAGCAATTAGCATAATGGTCAGTGTAGCATTTGTAATGTAGATGTAGGTCTAATATTTGAAAAACCTGTGTTGGATTTTGCTGGCTATTGTCATCGCTTTCGATTATGTGTGGAGAAGTAGCTGTTCCATTTGGTTGACTATCGTAGTTCTGTTAAGATGCAACAAGATTAGTTAGTCATTTGTAATGCTCATTGGAATATACTATTTTGCTTGCAACCTTACCTTTGAATCATCAACTAGGTCTTGTCGGCAATCTGCCCTGGAATCAATTACTGTCTCTTCTTGTTTGGCTGCTGGTTTAAATTTACGGAAAGTTCGTGACCTTGAAGTTGTACCCAACCTGTACTTTATTGCCTATGCATGTTCGAAATCATAAATAGTACAAGTACAATATCATTAACTTAGTACCTGAATTTGTTATGAGTACAATAACTGTTAAAATTGGTTCTGTACCTGAATATCTCTTCTATTTTGAATGCAAGTATTCTCTATTGAGATTAGTTTTGTGGATATCTTGTTGTCCAGAAACTGACAACCTTGTTGAATCTGCATGAGTTGTGTCATAATTGCATCGAAATTGGCTGATTGATGTGCCTACAACAGAGAGATTTAATAAATGTTTGAGGTGAGTAGTTTAAACTTCATACAGTGGGTATTACCTCAGGATCTTTGTAATTTTCAGGACTTGATGCCTGCAACAGAGAGATTTAATAAAGGTTTGAGTTGAACTGTTTAAACTTCATACATTGGCTATTACCTCTGGATATTTGAAATTTTCAGGACTTGATGGAACATTAACATCGTCTTCTATGTAAACATGGTGTGGACTCTCATCATCATCGCCTCTTCCATGTGAGTTGAATCCGTCTGCAGCCGTTCTTTCTTTAGTTGCTTTGAACATATAATCCGGTTCTTCATTGGTGGGAGTGTCGTCTTTGATGAAATCACCATTATTGTTTTCGGCAGTGGCGCCTTGACAGTCTTCTGACACATTGTCCCCTTTGATCTCTTCAGGCTCAGGTACGATGTGTATGACATCCACAGTGTTATCTTCCATGAAACCATCAATTTTTTTTTCGTCAATTTGGCCTTCACATTGTACTGGGACAATGTCCCCTTTGATCTCTTCAGGATCATCTATGACAACCACAACCTGTAATGTAATATGAATAGTATATAATAGTAGGTAATTAACATGTTAAAACTAATATTTAATGTTGCAAAGAGTTGTAACTTACAGTCCCTGTTTCAAGAATACATTTCTTGTCGTACTTTAGCCATGTCATTACATTCATTTCATTCCAATAGGCCATCAGCGGCGGTGGCCTTCCAACGTATGTCAGTGTGCACATTGGATCGTTAATGTGTACATGTTCCCATGCCCAAAACTGAAAAAAAAAGAGAGCAAGAATCACTGAATGTGGATTGCAAATGGAGACGTGTAATGGATACTTTCATACCTGAAGCAATGGTACATTCCCTTCTAGATTTCTCCTTCCTCCCTTCAATTCATTCAGACAATTGATTAAGTAATCTCTTGTGATTCTAGCCCAGTTGATGTTCTTAATGTTGTCAATGTCTTTCAGAAGGGCTAGGTACTGAGAACTAACTATTGGCTTGGTGGTGGGGCATAGGATGTACCCAATGGTGAATAGTACAAATCTTCTAAGAAAGTGCTCATCTGGGTGTTTTGCACTATTGATTTGTCTTGCCAACTCATGTAGGGAAATGTTCTTCCCCTTATGTTGCTTGTACATTGAATAATATTTGTAGTCTTCTCCATTCATGTGAGGCTTTGGCTTGATAATCATACCATCCGCAGGCAACCCCATGATACACTTCACATCATGGGTTGTTATTGGTATTGCTGTTCCTTGGATGTTAATTGTTTCAGTTTTACTGTCATATCTCTCAGCAATTTGCCCAATCAGTTTGCGGTGTAGGGTGATATCTGGCAGGGAAAGCATCCGGCCAAATCCAATCCTCTCAATTTGTGATATCTTACTCTTGTCAAAATTAGCAACTACAGCGAGAAATCTTTGTATTGAACATGCAATAGTCATGTCTTTCATAATGACAGGCTATGAAGTTCATGAAAAATAGAACAGCTTCAGAAGTATGGAAACATAAGGCCAATAAACAAAAAATGACCGAAGCTAACCTTATGCTCAGTGACCAGTGCTTCAGTTGTGATTTCATCAAAGCGCGGCTGGACCGAAGGTTCAAACTGTGCTTCATTTCTGACTTCGTCGTCTTCCAT
More
|
||||||||||
| CDS seq | ATGGAAGACGACGAAGTCAGAAATGAAGCACAGTTTGAACCTTCGGTCCAGCCGCGCTTTGATGAAATCACAACTGAAGCACTGGTCACTGAGCATAAGCCTGTCATTATGAAAGACATGACTATTGCATGTTCAATACAAAGATTTCTCGCTGTAGTTGCTAATTTTGACAAGAGTAAGATATCACAAATTGAGAGGATTGGATTTGGCCGGATGCTTTCCCTGCCAGATATCACCCTACACCGCAAACTGATTGGGCAAATTGCTGAGAGATATGACAGTAAAACTGAAACAATTAACATCCAAGGAACAGCAATACCAATAACAACCCATGATGTGAAGTGTATCATGGGGTTGCCTGCGGATGGTATGATTATCAAGCCAAAGCCTCACATGAATGGAGAAGACTACAAATATTATTCAATGTACAAGCAACATAAGGGGAAGAACATTTCCCTACATGAGTTGGCAAGACAAATCAATAGTGCAAAACACCCAGATGAGCACTTTCTTAGAAGATTTGTACTATTCACCATTGGGTACATCCTATGCCCCACCACCAAGCCAATAGTTAGTTCTCAGTACCTAGCCCTTCTGAAAGACATTGACAACATTAAGAACATCAACTGGGCTAGAATCACAAGAGATTACTTAATCAATTGTCTGAATGAATTGAAGGGAGGAAGGAGAAATCTAGAAGGGAATGTACCATTGCTTCAGTTTTGGGCATGGGAACATGTACACATTAACGATCCAATGTGCACACTGACATACGTTGGAAGGCCACCGCCGCTGATGGCCTATTGGAATGAAATGAATGTAATGACATGGCTAAAGTACGACAAGAAATGTATTCTTGAAACAGGGACTGTTGTGGTTGTCATAGATGATCCTGAAGAGATCAAAGGGGACATTGTCCCAGTACAATGTGAAGGCCAAATTGACGAAAAAAAAATTGATGGTTTCATGGAAGATAACACTGTGGATGTCATACACATCGTACCTGAGCCTGAAGAGATCAAAGGGGACAATGTGTCAGAAGACTGTCAAGGCGCCACTGCCGAAAACAATAATGGTGATTTCATCAAAGACGACACTCCCACCAATGAAGAACCGGATTATATGTTCAAAGCAACTAAAGAAAGAACGGCTGCAGACGGATTCAACTCACATGGAAGAGGCGATGATGATGAGAGTCCACACCATGTTTACATAGAAGACGATGTTAATGTTCCATCAAGTCCTGAAAATTTCAAATATCCAGAGGCATCAAGTCCTGAAAATTACAAAGATCCTGAGGCACATCAATCAGCCAATTTCGATGCAATTATGACACAACTCATGCAGATTCAACAAGGTTGTCAGTTTCTGGACAACAAGATATCCACAAAACTAATCTCAATAGAGAATACTTGCATTCAAAATAGAAGAGATATTCAGGCAATAAAGTACAGGTTGGGTACAACTTCAAGGTCACGAACTTTCCGTAAATTTAAACCAGCAGCCAAACAAGAAGAGACAGTAATTGATTCCAGGGCAGATTGCCGACAAGACCTAGTTGATGATTCAAAGAACTACGATAGTCAACCAAATGGAACAGCTACTTCTCCACACATAATCGAAAGCGATGACAATAGCCAGCAAAATCCAACACAGCAGTTATCAACAATTGGCGGAAGGCTTAGACGACCGGAGGGAAGGATTATCAAGCCAACACACAAGTCACAAACTGATTTCATCTACTACAAAAAAACATTTCCAAAGCCAGTTAAATCTAGTAGGGAACCGAAACCACATGATCTAAGCCTGCTGGATGAAGTAACCTTGAGTTACATCTCTAAGAGTGAAGACAAAAAATTGCTATCAACAATTGCTCCATCCAAAGCAAAGTGGTTGAACGGCACTGTCATAGATGCATACATACAAATCATCATAGACAAGCAATCCGACACTCCACGAGGACAGGGAATTGCACTCCTTGAAACTGCAACACAATGCCAGCTGTGGAAAATTAATGGTACAGACAAAGGTACATGCAACAAGAGATATCGTGATCAAAGATCCAAAGTTGCTGCCAGCTATTTAGAGCATGAAATGATTTTCCTACCCTTAAATAGAAACTCGGCCCACTGGTATGTAGCTGTCCTGGATGGTGTCAATGAAAAAATCCAAATACTGGACTCACTGCATATGGATAGGACAAGCTATGATGCAGAAAAAACCCTTACCACTACGATCAAAGGAATAGAGAAGTATCTTCGTTATGCCAAACAAGATGAACACAAGACTTATAAATGGAATTCTATGAACATCACGAAATGGCCAATATGCCCAATGCAAGTGCCTCAACAGAAGGACGGGTAA
More
|
||||||||||
| Protein seq | MEDDEVRNEAQFEPSVQPRFDEITTEALVTEHKPVIMKDMTIACSIQRFLAVVANFDKSKISQIERIGFGRMLSLPDITLHRKLIGQIAERYDSKTETINIQGTAIPITTHDVKCIMGLPADGMIIKPKPHMNGEDYKYYSMYKQHKGKNISLHELARQINSAKHPDEHFLRRFVLFTIGYILCPTTKPIVSSQYLALLKDIDNIKNINWARITRDYLINCLNELKGGRRNLEGNVPLLQFWAWEHVHINDPMCTLTYVGRPPPLMAYWNEMNVMTWLKYDKKCILETGTVVVVIDDPEEIKGDIVPVQCEGQIDEKKIDGFMEDNTVDVIHIVPEPEEIKGDNVSEDCQGATAENNNGDFIKDDTPTNEEPDYMFKATKERTAADGFNSHGRGDDDESPHHVYIEDDVNVPSSPENFKYPEASSPENYKDPEAHQSANFDAIMTQLMQIQQGCQFLDNKISTKLISIENTCIQNRRDIQAIKYRLGTTSRSRTFRKFKPAAKQEETVIDSRADCRQDLVDDSKNYDSQPNGTATSPHIIESDDNSQQNPTQQLSTIGGRLRRPEGRIIKPTHKSQTDFIYYKKTFPKPVKSSREPKPHDLSLLDEVTLSYISKSEDKKLLSTIAPSKAKWLNGTVIDAYIQIIIDKQSDTPRGQGIALLETATQCQLWKINGTDKGTCNKRYRDQRSKVAASYLEHEMIFLPLNRNSAHWYVAVLDGVNEKIQILDSLHMDRTSYDAEKTLTTTIKGIEKYLRYAKQDEHKTYKWNSMNITKWPICPMQVPQQKDG |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0127400 | OsMH63_01T0127400.1 | Chr01 | 7958124 | 7961384 | - | maker | ||
| CDS seq | ATGGAAGACGACGAAGTCAGAAATGAAGCACAGTTTGAACCTTCGGTCCAGCCGCGCTTTGATGAAATCACAACTGAAGCACTGGTCACTGAGCATAAGCCTGTCATTATGAAAGACATGACTATTGCATGTTCAATACAAAGATTTCTCGCTGTAGTTGCTAATTTTGACAAGAGTAAGATATCACAAATTGAGAGGATTGGATTTGGCCGGATGCTTTCCCTGCCAGATATCACCCTACACCGCAAACTGATTGGGCAAATTGCTGAGAGATATGACAGTAAAACTGAAACAATTAACATCCAAGGAACAGCAATACCAATAACAACCCATGATGTGAAGTGTATCATGGGGTTGCCTGCGGATGGTATGATTATCAAGCCAAAGCCTCACATGAATGGAGAAGACTACAAATATTATTCAATGTACAAGCAACATAAGGGGAAGAACATTTCCCTACATGAGTTGGCAAGACAAATCAATAGTGCAAAACACCCAGATGAGCACTTTCTTAGAAGATTTGTACTATTCACCATTGGGTACATCCTATGCCCCACCACCAAGCCAATAGTTAGTTCTCAGTACCTAGCCCTTCTGAAAGACATTGACAACATTAAGAACATCAACTGGGCTAGAATCACAAGAGATTACTTAATCAATTGTCTGAATGAATTGAAGGGAGGAAGGAGAAATCTAGAAGGGAATGTACCATTGCTTCAGTTTTGGGCATGGGAACATGTACACATTAACGATCCAATGTGCACACTGACATACGTTGGAAGGCCACCGCCGCTGATGGCCTATTGGAATGAAATGAATGTAATGACATGGCTAAAGTACGACAAGAAATGTATTCTTGAAACAGGGACTGTTGTGGTTGTCATAGATGATCCTGAAGAGATCAAAGGGGACATTGTCCCAGTACAATGTGAAGGCCAAATTGACGAAAAAAAAATTGATGGTTTCATGGAAGATAACACTGTGGATGTCATACACATCGTACCTGAGCCTGAAGAGATCAAAGGGGACAATGTGTCAGAAGACTGTCAAGGCGCCACTGCCGAAAACAATAATGGTGATTTCATCAAAGACGACACTCCCACCAATGAAGAACCGGATTATATGTTCAAAGCAACTAAAGAAAGAACGGCTGCAGACGGATTCAACTCACATGGAAGAGGCGATGATGATGAGAGTCCACACCATGTTTACATAGAAGACGATGTTAATGTTCCATCAAGTCCTGAAAATTTCAAATATCCAGAGGCATCAAGTCCTGAAAATTACAAAGATCCTGAGGCACATCAATCAGCCAATTTCGATGCAATTATGACACAACTCATGCAGATTCAACAAGGTTGTCAGTTTCTGGACAACAAGATATCCACAAAACTAATCTCAATAGAGAATACTTGCATTCAAAATAGAAGAGATATTCAGGCAATAAAGTACAGGTTGGGTACAACTTCAAGGTCACGAACTTTCCGTAAATTTAAACCAGCAGCCAAACAAGAAGAGACAGTAATTGATTCCAGGGCAGATTGCCGACAAGACCTAGTTGATGATTCAAAGAACTACGATAGTCAACCAAATGGAACAGCTACTTCTCCACACATAATCGAAAGCGATGACAATAGCCAGCAAAATCCAACACAGCAGTTATCAACAATTGGCGGAAGGCTTAGACGACCGGAGGGAAGGATTATCAAGCCAACACACAAGTCACAAACTGATTTCATCTACTACAAAAAAACATTTCCAAAGCCAGTTAAATCTAGTAGGGAACCGAAACCACATGATCTAAGCCTGCTGGATGAAGTAACCTTGAGTTACATCTCTAAGAGTGAAGACAAAAAATTGCTATCAACAATTGCTCCATCCAAAGCAAAGTGGTTGAACGGCACTGTCATAGATGCATACATACAAATCATCATAGACAAGCAATCCGACACTCCACGAGGACAGGGAATTGCACTCCTTGAAACTGCAACACAATGCCAGCTGTGGAAAATTAATGGTACAGACAAAGGTACATGCAACAAGAGATATCGTGATCAAAGATCCAAAGTTGCTGCCAGCTATTTAGAGCATGAAATGATTTTCCTACCCTTAAATAGAAACTCGGCCCACTGGTATGTAGCTGTCCTGGATGGTGTCAATGAAAAAATCCAAATACTGGACTCACTGCATATGGATAGGACAAGCTATGATGCAGAAAAAACCCTTACCACTACGATCAAAGGAATAGAGAAGTATCTTCGTTATGCCAAACAAGATGAACACAAGACTTATAAATGGAATTCTATGAACATCACGAAATGGCCAATATGCCCAATGCAAGTGCCTCAACAGAAGGACGGGTAA
More
|
|||||||
| Protein seq | MEDDEVRNEAQFEPSVQPRFDEITTEALVTEHKPVIMKDMTIACSIQRFLAVVANFDKSKISQIERIGFGRMLSLPDITLHRKLIGQIAERYDSKTETINIQGTAIPITTHDVKCIMGLPADGMIIKPKPHMNGEDYKYYSMYKQHKGKNISLHELARQINSAKHPDEHFLRRFVLFTIGYILCPTTKPIVSSQYLALLKDIDNIKNINWARITRDYLINCLNELKGGRRNLEGNVPLLQFWAWEHVHINDPMCTLTYVGRPPPLMAYWNEMNVMTWLKYDKKCILETGTVVVVIDDPEEIKGDIVPVQCEGQIDEKKIDGFMEDNTVDVIHIVPEPEEIKGDNVSEDCQGATAENNNGDFIKDDTPTNEEPDYMFKATKERTAADGFNSHGRGDDDESPHHVYIEDDVNVPSSPENFKYPEASSPENYKDPEAHQSANFDAIMTQLMQIQQGCQFLDNKISTKLISIENTCIQNRRDIQAIKYRLGTTSRSRTFRKFKPAAKQEETVIDSRADCRQDLVDDSKNYDSQPNGTATSPHIIESDDNSQQNPTQQLSTIGGRLRRPEGRIIKPTHKSQTDFIYYKKTFPKPVKSSREPKPHDLSLLDEVTLSYISKSEDKKLLSTIAPSKAKWLNGTVIDAYIQIIIDKQSDTPRGQGIALLETATQCQLWKINGTDKGTCNKRYRDQRSKVAASYLEHEMIFLPLNRNSAHWYVAVLDGVNEKIQILDSLHMDRTSYDAEKTLTTTIKGIEKYLRYAKQDEHKTYKWNSMNITKWPICPMQVPQQKDG
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.3889365 | 5.8957585 | 9.1513755 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0467500 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g07350 | SBH | 0.0 | 0.102436 | 0.242771 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0467500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0003180 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0011870 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0003170 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0011680 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0009640 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0264000 | RBH | 0.811624 | 1.223649 | 1.9255205 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0009640 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0127000 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0007640 | RBH | 0.143314 | 0.242411 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0009670 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0011700 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0009760 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0011700 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0007830 | RBH | 0.0 | 0.0 | 0.0 |
