Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsMH63_01G0069000		OGI:01014270 \| 16/16			Minghui 63 \| MH63RS3 \| HZAU			Chr01:3867885-3873745		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		TPR3, OsTPR003, TPR003, OsTPR3, -
DNA seq		CGTAAGCATTCAGCAATGTTCTGATAATTGCGTGGAACTGAATCAACTGATACAATGTTCAGGGGTTGTGAGTAGCATCAGATAGATAAGGGAGGTTAGTGTAAGCGTGACAGTCAGCTGGCTGTCGATTGGTGAGAGTTCCGTGAAGTGCATTATTTACATTTCATCACATATCCAACAAAATAGTGCAGCGCTAAGAAAAGTTCCTGCTTAGCTGACGATTATGCGGTTATTCTGCCTCACTGCTCATCTGGAGGTTTCGCCATTAATTCCCTAGCTTTCCTACAAAAGATTTGGACCAAAAAAATGTCAGTTATAACAACCCAAAGCGTAAAATTGACCCAAAGATGGAAGAATGGCATATAAAACCGAAAAGAACAGTTGAGTGTTGAGTTGCTTCAGTTGCAGTAAATGTGGGCATAATCACAACGGAATGCCAGTACTAATGGTCATGTTCCCTGCGCAACCACATTTTTATTTGGAAGGCATACTCGAGCGAAACAGAAGATTACCTTAGTTCCCTCTCAATCTCGACATTCCCAGAATCTAATTTTTGTGCATCCATGAGAGCATCACACGCATGTTTGTACTCCTGGTTTTAGAGTAAATCAGGAGTTCAGGACACCGACCATAATACCAGGATCACAAAACGTTAACTGCAGTGAGTCTTACCTTGAGTAGCATGTGAGCTGCACCCTGACGGTAGCAAGCTTTTGCCCAGTTAGGCCGCATCATTCGGCATCTGTAAGCATCAGAAAGAGCACCTTCACCATCACCCATGAGCAATCTACAGATGCTCCTGTTTGCGTACAAAACTGCAGTTGGTCCGTGAGCTATTGCCTATGCTCAAGCATCAGATAAACAAATCATTCCCAAGCTTAAGAATAACATACAAAAACTTTATAACAACAATAATTGATTAGCGTTAACAATCAGAAATAAGGTGCAAGAAATTACCAGATCATATATTTTTGCTGCAGCGGCGTAATTCTTCTGCTTGAATACCAAATCTGCCTGTGCCTTCAAAACGACTTTTCTACTCTCCTTCTGATGTTGATCCTAAACAACGTAAACAATAGTATCTTGATGCAAATCTGAAGTTAACTTTTGAAATTTTGAATATCAGAACATTTATTTAGGATTACAAAGCTAAACCAGTACTATTAACCAGTACTGTTAAGACATGATCCTTCTATCTAGTACTATTAAATGCCGTTGATATGTAAGCTAAACCAGTTTTACAGCCTAACAAGCATCAAAGACGTGAAGTGGGTGAAATAGAGCTCTGCAATGCAAAGTGCATGGTAAGCAACATGAAATATGAGCAGAGAGCATAGCAGGACCTTTAGTACAGAAAGATCAAAAGTGCATATCTGTACGAAACGTACCATTGGCTTTGTATTTTTGACTTTTGCATGAGCGATTATTCCATTAACACTCCAGTTTGGGACATTTGGAATTGGAGAAGTCAATGGAAATAGCATTTCAACTTCTTCCCTGCAATCACGTAATGCAGCATGCTCTATTGGCAACCAACCCAACTGCACAAGCACAACAGAATGAAGAAAAATAGGGCCTGTTTGGCACAGCTCCAGCTCCACCCCTCCTGGAGCTGGAGCTGGAGCTCAGCCAAACAGTTTCAGCTCCACCAAAACTGGGAGTGGAGTTGGGTGGAGCTCTCTCACAAAATGTACTAGAGTTGTGGAGCTGGGTTTAGGCAGCTCCACAACTCCACTCCAGACTCAACTCCTGGAGTTATATATAGGAGTTGAGCTGTACCAAACAGGCCCATAGTTTCATACGGCGTAATTCAGCAAGGAACCTAAAACAAACAATATTGGTGAAATCAGTGTATGGCCTATTATCACAATCTGTGGCTTTCAAGTTTCAACCAAACGACTCATTGCGTCCAAAAAAACCATGGTCTGTAGGTTCAAAGCTGGCCATGGGCTTTTTGGACATTGATATGAACTTCTATCAAAATGGTATTTTGGATATAGGCTGGATTTGAGAACTCGTCGGTTGCTGAAAGGTCATCCATGCTTTGTACAACTCGTAAGATATACTTACACATACAATAAAATAAAAGAGCACAGGTTCAGATAATCCATAGGAAACTACAAAATATGCAAATCATAAGTGCAATGTTTTTGTTAAATTAGGCCCTCTTAGGATGTGACAAGGATGAATATTAAATATGGGACACGTAAAACAAGAAAACCATTAGTGTATGATTAATTTAGTTTTAATTATTTTAAACTTGAAAATGGATTTATTTGATATTTTAAAGCAACTTCTATATAGAAAGTTTTCGCACGAAATACATAGTTTAACAATTTGAAAATTTTGCTAACAAAAACCGAGGTAAAATCTGTATCTTAATCATAAACTGACATGACCTTAGACAAAACATCCTCAGAGTTGTAATAAAACACAAAAGAATCAGACTTATAGACCAAAGTGGAGAAGCAACAACTGACTCAGAAGAATAGAAAACATACATCATCAGGAATATTGGGGTTTGCTCCAGCCTTCAGAAGAAACTGAATGAAGTTAGTATAGCCTCCCTGCGACGCAGCAAGCATCAAAGGGGTTACAACTGTACCCTTGCCATTAACATCAGCACCATCCTGAGAAAAGCATTGTGCAATAGAATATTTAGCTCCATATGTTCATGGAACAAATGTCTTGAGTTAGCAAAATTAAAACACAGCATTAGTTGACCAAATATAGACTCAATAAAACACTGACCTTTATGAGTAGCTTCATACACTTCAATGATCGGTAGATAAGGGAACTCATCAGGGGACTACCGGCTCCATTATTGATAATTACGTTAGGCTGAAAGCAGAATATAAGTATTTAGCCTAAATACAGCCTGAAAGCAGAATATGTGAAAGAAAAAGGAAAAGCAATATAATGCTCTAACTTTTTTTTTCTGATTAGTGTTTGCCACTTTTTATAAGTCTAACTGTTGAAGTTAGCAACTTTCGCTGTTGAGAATTAAAGTTGCATTATGTGCATATTTTACAGACTTTTTACTACAATAGAAAAAATATATTACACGTGAAACCATAATTATTATAATCAGAGTTCAGATGTAGGCAATGCCACATTTACTCAAATTTCATGAAGCCAAACTGAAGCTACTGCATTGGAATAGAAGAGATTTTAGTGCACATTTAGTGAAGTCAATATCGAACCAGAAGGTCAGCAATGAGGTAGATGAAGGTACAAATATGCCATGATGATCCTAAAGCATTTCAATCATTAAAGAGATGAGTAGATAAAAGAGCAGGATAATAGCTTATATAAGTGCCATGAATTGAACACCTAAACTCCCATGCTCTTTCCCAAAAAAACATCAGCCAACCTTATTTAGAGCATGCCAAATGGCAATTTTAGGACTTAGGAGTATTACTCAAAGGTCAGCGGTATAATAATAATCACAATGCAGGTGGAAGATGCTATGTACGCGGTGTGGCCGCGTCGATCAGGGGCCTCAGTAGCGTGTGCTACGCGTGGTATCCTAACTCTCATCACAATAATTCATTTCATAACCAAAAAAAAAAGAAAAGAAATAATCCTTTTTAAAACCTGGAAATCCATATGATCTAAGATCCTCTATAAAATGTCAAAATAAAAACCAAAAGGATAGATTATGCACTGCAATATCTGAGAATGGGTCAATCCAAGCAAACAGAACAGTCCCATGCAAACACGCATCAGTGCAGTGGCGGAGACAGCGTGGGGGCTGGGGGGTCTATAGACCCCCTACCCCCTAATAGATCATTAGAGCCCCCATTAAGACCCCCCTAAAATTTAAATCCATATATCTATTAAAGGGGGCTAAAATAGACTTTATCTGAGATTGTTAGAAGGCCCAAAAGTCTGAGGAGCCCCCGCTATAATTTTATCCTGGCTCCGCCACTGCATCAGTGTACATCAGCTAATAAGCTAACTATCTAAGTGGAAAGCAAAACAAATATCTATCTATCCAAACTAGCAGTGAGAAAAAGGAAGAGGAAATAAGAAATAGTGGCAACTACATACATCTGCCTTGTGATCCAACAAAATCTTCAGTGTCTTATCCTTGCCATTGTTAGCAGCATGAAAGAGTGGTGTTCCAAGGCCACAGTCTATGTCAACAGGTATCCCTTTTGAAAGCAAGAACTCTGTTACCTTACAGCATCCTGCAGTGAATGAGATGGGCCATAAATCATGGGGAAACAAATACTATATAAATTGAGTTATTTGAATAAACAGTTAGTACCAGTACAATGGACAAATCACAATAGATTACATGTGAGATGTGACCGAGTATAAACAGAGCAAACCTATACAACTTTGAGTGGTGATATATAAACTAAAAGTATCTAGATTAGCAACACAACAAAAGATAACTGTGACGACATGGTTGAATTAAATGTAATCTATTAATAGTAATGCAGTATCGTAGAATCTTGTACAACAATATAATTGGTAATATAACAAGGAATTGGATAGTGTTCATATCAAGGGAGACCTGTGCCAGCAGCATGGTGGAGAACTGTGCATCCTCTAACATCTGCTTTTGTTACATCACCACCATGATCAAGAAAATACTGCACCGTAGGAACATCACCAGACTCAGCAGCGGCCATAAACGGTGTTATATCTGTAATAAACAGCACATCAGTACACTTGGCACATTATACTGCCAAAACATAGACATGGCAGCCGCCAATTTCATGAAAGGATGGTAGAGTTAGATAATAACCTTCTTTTCCAGCAATATTCACGTCACCCCCCAATTCCTCCACCAAGAACTTGCAAACATTCAGATGGCCCTGGCATGCCGCGGCGTGCAGCACCCCAATCCCATGCTTGTTAAGAGCTAAGACTGCATACTGGGTCTTTCCTTTCTCGATCCCAAGGCTCTTTAAAATACCTTCTCGCAAATAAGAACAAAAAGAAGTCATCACAGTGAGGAAGATAATCTGCGAATGAACAGATTAACAAAGTAGAACTCGAAAAAGCGACGAATACGTGCAACGTGCAAGAACCTCACTGAGTCATGTGAACCTATACTTCATACTTGCGACTTGAAAAACATTTTTGTAGAGTACTACCTGCTACTCATCACACATTAGCACTTGGAGAGGTAACTGTAATAGAAAGATGATCACAACGTTGTCGCATTTATCCAACGCAAGGACTTGCTACGATAAAAGCCTCAGATCTTGCAATTTCTAGATAAGATGGCATGCATCTCCAGTAATCCATAGACCTGGCTGTTAATTCCTTCACGCAGGGTCAAAAATCCATGCAACATATAAACATTACCGAAAATAAATTGTGGGAAATTCCCAAAGGCAACGAGTGCTAGATACAGAATTTGCATTCCAAAATTCCATGGCCAAATCAATTAACAGTACAGCCATCGCCAAGCGCTCCACACAAGGACACACATGCATCACCCAAACCTAAGGGAGGAAAAGCACGCAACACAGGCGCATGCAAAGGGGGGGTAATGCATACACGCATCGATCGGGGGGGATCGACGCGGCGGAGAAGAAGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAAGCAAACCTACCTTTGAGGCGTCCGAGGTTCCCGTCGAAGGCCGCCCTCAGGAGAGCGCTCTCACCTGCGAACAAACCGAGAAATCGCCATTAGACCACATGGCCGAGGAGCTAGCAAGCCGATCGAGCTAGGAGGAGATGCGGAGAGGTGGGGGGAGGCTGGACGAACTGGTGCCGTCGTCGGTGGGGCGGCAGTAGACGAACGGCGCCGCCATGGCCGCGAGGAGGGAGGAAGCTTGCAGGAGGAGGAGGACGAGGAGCGGAGT More
CDS seq		ATGGCGGCGCCGTTCGTCTACTGCCGCCCCACCGACGACGGCACCAGTGAGAGCGCTCTCCTGAGGGCGGCCTTCGACGGGAACCTCGGACGCCTCAAAGAAGGTATTTTAAAGAGCCTTGGGATCGAGAAAGGAAAGACCCAGTATGCAGTCTTAGCTCTTAACAAGCATGGGATTGGGGTGCTGCACGCCGCGGCATGCCAGGGCCATCTGAATGTTTGCAAGTTCTTGGTGGAGGAATTGGGGGGTGACGTGAATATTGCTGGAAAAGAAGATATAACACCGTTTATGGCCGCTGCTGAGTCTGGTGATGTTCCTACGGTGCAGTATTTTCTTGATCATGGTGGTGATGTAACAAAAGCAGATGTTAGAGGATGCACAGTTCTCCACCATGCTGCTGGCACAGGATGCTGTAAGGTAACAGAGTTCTTGCTTTCAAAAGGGATACCTGTTGACATAGACTGTGGCCTTGGAACACCACTCTTTCATGCTGCTAACAATGGCAAGGATAAGACACTGAAGATTTTGTTGGATCACAAGGCAGATGATGGTGCTGATGTTAATGGCAAGGGTACAGTTGTAACCCCTTTGATGCTTGCTGCGTCGCAGGGAGGCTATACTAACTTCATTCAGTTTCTTCTGAAGGCTGGAGCAAACCCCAATATTCCTGATGATCATGCTGCATTACGTGATTGCAGGGAAGAAGTTGAAATGCTATTTCCATTGACTTCTCCAATTCCAAATGTCCCAAACTGGAGTGTTAATGGAATAATCGCTCATGCAAAAGTCAAAAATACAAAGCCAATGGATCAACATCAGAAGGAGAGTAGAAAAGTCGTTTTGAAGGCACAGGCAGATTTGGTATTCAAGCAGAAGAATTACGCCGCTGCAGCAAAAATATATGATCTGGCAATAGCTCACGGACCAACTGCAGTTTTGTACGCAAACAGGAGCATCTGTAGATTGCTCATGGGTGATGGTGAAGGTGCTCTTTCTGATGCTTACAGATGCCGAATGATGCGGCCTAACTGGGCAAAAGCTTGCTACCGTCAGGGTGCAGCTCACATGCTACTCAAGGAGTACAAACATGCGTGTGATGCTCTCATGGATGCACAAAAATTAGATTCTGGGAATGTCGAGATTGAGAGGGAACTAAGGAAAGCTAGGGAATTAATGGCGAAACCTCCAGATGAGCAGTGA More
Protein seq		MAAPFVYCRPTDDGTSESALLRAAFDGNLGRLKEGILKSLGIEKGKTQYAVLALNKHGIGVLHAAACQGHLNVCKFLVEELGGDVNIAGKEDITPFMAAAESGDVPTVQYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLGTPLFHAANNGKDKTLKILLDHKADDGADVNGKGTVVTPLMLAASQGGYTNFIQFLLKAGANPNIPDDHAALRDCREEVEMLFPLTSPIPNVPNWSVNGIIAHAKVKNTKPMDQHQKESRKVVLKAQADLVFKQKNYAAAAKIYDLAIAHGPTAVLYANRSICRLLMGDGEGALSDAYRCRMMRPNWAKACYRQGAAHMLLKEYKHACDALMDAQKLDSGNVEIERELRKARELMAKPPDEQ
Function		Ankyrin repeat and SOCS box protein 3 [UniProtKB/Swiss-Prot:Q08DV6]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0069000	OsMH63_01T0069000-mRNA-1	Chr01	3867885	3873745	-	maker
CDS seq	ATGCTATTTCCATTGACTTCTCCAATTCCAAATGTCCCAAACTGGAGTGTTAATGGAATAATCGCTCATGCAAAAGTCAAAAATACAAAGCCAATGGATCAACATCAGAAGGAGAGTAGAAAAGTCGTTTTGAAGGCACAGGCAGATTTGGTATTCAAGCAGAAGAATTACGCCGCTGCAGCAAAAATATATGATCTGGCAATAGCTCACGGACCAACTGCAGTTTTGTACGCAAACAGGAGCATCTGTAGATTGCTCATGGGTGATGGTGAAGGTGCTCTTTCTGATGCTTACAGATGCCGAATGATGCGGCCTAACTGGGCAAAAGCTTGCTACCGTCAGGGTGCAGCTCACATGCTACTCAAGGAGTACAAACATGCGTGTGATGCTCTCATGGATGCACAAAAATTAGATTCTGGGAATGTCGAGATTGAGAGGGAACTAAGGAAAGCTAGGGAATTAATGGCGAAACCTCCAGATGAGCAGTGA More
Protein seq	MLFPLTSPIPNVPNWSVNGIIAHAKVKNTKPMDQHQKESRKVVLKAQADLVFKQKNYAAAAKIYDLAIAHGPTAVLYANRSICRLLMGDGEGALSDAYRCRMMRPNWAKACYRQGAAHMLLKEYKHACDALMDAQKLDSGNVEIERELRKARELMAKPPDEQ

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0069000	OsMH63_01T0069000-mRNA-2	Chr01	3867885	3873745	-	maker
CDS seq	ATGGCGGCGCCGTTCGTCTACTGCCGCCCCACCGACGACGGCACCAGTGAGAGCGCTCTCCTGAGGGCGGCCTTCGACGGGAACCTCGGACGCCTCAAAGGTAGGTTTGCTTCCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTTCTTCTCCGCCGCGTCGATCCCCCCCGATCGATGCGTATTATCTTCCTCACTGTGATGACTTCTTTTTGTTCTTATTTGCGAGAAGGTATTTTAAAGAGCCTTGGGATCGAGAAAGGAAAGACCCAGTATGCAGTCTTAGCTCTTAACAAGCATGGGATTGGGGTGCTGCACGCCGCGGCATGCCAGGGCCATCTGAATGTTTGCAAGTTCTTGGTGGAGGAATTGGGGGGTGACGTGAATATTGCTGGAAAAGAAGATATAACACCGTTTATGGCCGCTGCTGAGTCTGGTGATGTTCCTACGGTGCAGTATTTTCTTGATCATGGTGGTGATGTAACAAAAGCAGATGTTAGAGGATGCACAGTTCTCCACCATGCTGCTGGCACAGGATGCTGTAAGGTAACAGAGTTCTTGCTTTCAAAAGGGATACCTGTTGACATAGACTGTGGCCTTGGAACACCACTCTTTCATGCTGCTAACAATGGCAAGGATAAGACACTGAAGATTTTGTTGGATCACAAGGCAGATGATGGTGCTGATGTTAATGGCAAGGGTACAGTTGTAACCCCTTTGATGCTTGCTGCGTCGCAGGGAGGCTATACTAACTTCATTCAGTTTCTTCTGAAGGCTGGAGCAAACCCCAATATTCCTGATGATGTATGTTTTCTATTCTTCTGA More
Protein seq	MAAPFVYCRPTDDGTSESALLRAAFDGNLGRLKGRFASSPPPPPPPPPLLLLRRVDPPRSMRIIFLTVMTSFCSYLREGILKSLGIEKGKTQYAVLALNKHGIGVLHAAACQGHLNVCKFLVEELGGDVNIAGKEDITPFMAAAESGDVPTVQYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLGTPLFHAANNGKDKTLKILLDHKADDGADVNGKGTVVTPLMLAASQGGYTNFIQFLLKAGANPNIPDDVCFLFF More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0069000	OsMH63_01T0069000-mRNA-3	Chr01	3867885	3873745	-	maker
CDS seq	ATGGCGGCGCCGTTCGTCTACTGCCGCCCCACCGACGACGGCACCAGTGAGAGCGCTCTCCTGAGGGCGGCCTTCGACGGGAACCTCGGACGCCTCAAAGAAGGTATTTTAAAGAGCCTTGGGATCGAGAAAGGAAAGACCCAGTATGCAGTCTTAGCTCTTAACAAGCATGGGATTGGGGTGCTGCACGCCGCGGCATGCCAGGGCCATCTGAATGTTTGCAAGTTCTTGGTGGAGGAATTGGGGGGTGACGTGAATATTGCTGGAAAAGAAGATATAACACCGTTTATGGCCGCTGCTGAGTCTGGTGATGTTCCTACGGTGCAGTATTTTCTTGATCATGGTGGTGATGTAACAAAAGCAGATGTTAGAGGATGCACAGTTCTCCACCATGCTGCTGGCACAGGATGCTGTAAGGTAACAGAGTTCTTGCTTTCAAAAGGGATACCTGTTGACATAGACTGTGGCCTTGGAACACCACTCTTTCATGCTGCTAACAATGGCAAGGATAAGACACTGAAGATTTTGTTGGATCACAAGGCAGATGATGGTGCTGATGTTAATGGCAAGGGTACAGTTGTAACCCCTTTGATGCTTGCTGCGTCGCAGGGAGGCTATACTAACTTCATTCAGTTTCTTCTGAAGGCTGGAGCAAACCCCAATATTCCTGATGATGTATGTTTTCTATTCTTCTGA More
Protein seq	MAAPFVYCRPTDDGTSESALLRAAFDGNLGRLKEGILKSLGIEKGKTQYAVLALNKHGIGVLHAAACQGHLNVCKFLVEELGGDVNIAGKEDITPFMAAAESGDVPTVQYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLGTPLFHAANNGKDKTLKILLDHKADDGADVNGKGTVVTPLMLAASQGGYTNFIQFLLKAGANPNIPDDVCFLFF More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsMH63_01G0069000	OsMH63_01T0069000-mRNA-4	Chr01	3867885	3873745	-	maker
CDS seq	ATGGCGGCGCCGTTCGTCTACTGCCGCCCCACCGACGACGGCACCAGTGAGAGCGCTCTCCTGAGGGCGGCCTTCGACGGGAACCTCGGACGCCTCAAAGAAGGTATTTTAAAGAGCCTTGGGATCGAGAAAGGAAAGACCCAGTATGCAGTCTTAGCTCTTAACAAGCATGGGATTGGGGTGCTGCACGCCGCGGCATGCCAGGGCCATCTGAATGTTTGCAAGTTCTTGGTGGAGGAATTGGGGGGTGACGTGAATATTGCTGGAAAAGAAGATATAACACCGTTTATGGCCGCTGCTGAGTCTGGTGATGTTCCTACGGTGCAGTATTTTCTTGATCATGGTGGTGATGTAACAAAAGCAGATGTTAGAGGATGCACAGTTCTCCACCATGCTGCTGGCACAGGATGCTGTAAGGTAACAGAGTTCTTGCTTTCAAAAGGGATACCTGTTGACATAGACTGTGGCCTTGGAACACCACTCTTTCATGCTGCTAACAATGGCAAGGATAAGACACTGAAGATTTTGTTGGATCACAAGGCAGATGATGGTGCTGATGTTAATGGCAAGGGTACAGTTGTAACCCCTTTGATGCTTGCTGCGTCGCAGGGAGGCTATACTAACTTCATTCAGTTTCTTCTGAAGGCTGGAGCAAACCCCAATATTCCTGATGATCATGCTGCATTACGTGATTGCAGGGAAGAAGTTGAAATGCTATTTCCATTGACTTCTCCAATTCCAAATGTCCCAAACTGGAGTGTTAATGGAATAATCGCTCATGCAAAAGTCAAAAATACAAAGCCAATGGATCAACATCAGAAGGAGAGTAGAAAAGTCGTTTTGAAGGCACAGGCAGATTTGGTATTCAAGCAGAAGAATTACGCCGCTGCAGCAAAAATATATGATCTGGCAATAGCTCACGGACCAACTGCAGTTTTGTACGCAAACAGGAGCATCTGTAGATTGCTCATGGGTGATGGTGAAGGTGCTCTTTCTGATGCTTACAGATGCCGAATGATGCGGCCTAACTGGGCAAAAGCTTGCTACCGTCAGGGTGCAGCTCACATGCTACTCAAGGAGTACAAACATGCGTGTGATGCTCTCATGGATGCACAAAAATTAGATTCTGGGAATGTCGAGATTGAGAGGGAACTAAGGAAAGCTAGGGAATTAATGGCGAAACCTCCAGATGAGCAGTGA More
Protein seq	MAAPFVYCRPTDDGTSESALLRAAFDGNLGRLKEGILKSLGIEKGKTQYAVLALNKHGIGVLHAAACQGHLNVCKFLVEELGGDVNIAGKEDITPFMAAAESGDVPTVQYFLDHGGDVTKADVRGCTVLHHAAGTGCCKVTEFLLSKGIPVDIDCGLGTPLFHAANNGKDKTLKILLDHKADDGADVNGKGTVVTPLMLAASQGGYTNFIQFLLKAGANPNIPDDHAALRDCREEVEMLFPLTSPIPNVPNWSVNGIIAHAKVKNTKPMDQHQKESRKVVLKAQADLVFKQKNYAAAAKIYDLAIAHGPTAVLYANRSICRLLMGDGEGALSDAYRCRMMRPNWAKACYRQGAAHMLLKEYKHACDALMDAQKLDSGNVEIERELRKARELMAKPPDEQ More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.808431	6.8238785	4.116335

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0175400	RBH	0.0	0.000000	1.467392
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g08000	RBH	0.0	0.000000	0.498499
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0175400	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0005520	RBH	0.000000	0.0	4.821747
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0005220	RBH	0.0	0.0	2.209015
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0006630	RBH	0.433991	0.0	9.708139
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0005120	RBH	0.0	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0005330	RBH	0.671909	0.0	8.830068
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0065100	SBH	0.1107725	0.186216	0.3339905
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0005280	RBH	0.160980	0.000000	0.497538
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0069500	RBH	2.926017	10.1367605	24.332473
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0005090	RBH	0.000000	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0005280	RBH	0.0	1.926212	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0006350	SBH	14.306790	30.515209	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0005270	SBH	0.0	0.000000	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0005270	RBH	0.000000	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G005310	RBH	0.207828	0.0	0.628901
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0005190	RBH	0.0	0.0	0.841257

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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