Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0030500 | OGI:01006150 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:1826890-1827488 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACCTCCTCCAACTTCTGTAGTATTTGATTGAACTTCCCTCTTGTCTACGGTTGGCCTCCATCAACTCAAACCTCTCAAGAATCCGATCTAAAGCTTCGTCCATGGATATTCCCTCCTTGTTCATGGTGGACTTGATGGGAACGGGCTCTGCTATCCTTTCATCATCCTTGAACACCTTATGTTGGCTTGGCATTCTGTCGAACAGGTTGTGTGTGCTAGATTCTTGAACACCCCCCTGCCCAATTCTTCCTCCACCTTGCACCTCTGCCTTCCTAAGACCTCCATGATGAGAAATCCCACGAACCGAGTAGCTCTGATACCAGATTGTTAGCAACCTTCTTCACTAGAATCAAACAACGGTAGTTCTCAATACAACTTGGAAGTGTTTGACTAGAACAAGGTAGAATAAGAATAGGGATACAAGCTAATAGAGAGACTGGATTGCCCTAGTAGCTGCAGTAGAGATAGTAGCAAGAGAGGTAGTAGAGGAAGAGAGGAAGATCGACAAGGTTCAGCCTGAACCAAGTCGCCGCCGCCGCCGAAGCCGCCGATGCCTGTTTGATCTCTGTTCTGTTCCTTTTCCTGAGAGTGTAGCAT
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| CDS seq | ATGCTACACTCTCAGGAAAAGGAACAGAACAGAGATCAAACAGGCATCGGCGGCTTCGGCGGCGGCGGCGACTTGAGCTACTCGGTTCGTGGGATTTCTCATCATGGAGGTCTTAGGAAGGCAGAGGTGCAAGGTGGAGGAAGAATTGGGCAGGGGGGTGTTCAAGAATCTAGCACACACAACCTGTTCGACAGAATGCCAAGCCAACATAAGGTGTTCAAGGATGATGAAAGGATAGCAGAGCCCGTTCCCATCAAGTCCACCATGAACAAGGAGGGAATATCCATGGACGAAGCTTTAGATCGGATTCTTGAGAGGTTTGAGTTGATGGAGGCCAACCGTAGACAAGAGGGAAGTTCAATCAAATACTACAGAAGTTGGAGGAGGTAG |
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| Protein seq | MLHSQEKEQNRDQTGIGGFGGGGDLSYSVRGISHHGGLRKAEVQGGGRIGQGGVQESSTHNLFDRMPSQHKVFKDDERIAEPVPIKSTMNKEGISMDEALDRILERFELMEANRRQEGSSIKYYRSWRR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0030500 | OsMH63_01T0030500.1 | Chr01 | 1826890 | 1827488 | - | maker | ||
| CDS seq | ATGCTACACTCTCAGGAAAAGGAACAGAACAGAGATCAAACAGGCATCGGCGGCTTCGGCGGCGGCGGCGACTTGAGCTACTCGGTTCGTGGGATTTCTCATCATGGAGGTCTTAGGAAGGCAGAGGTGCAAGGTGGAGGAAGAATTGGGCAGGGGGGTGTTCAAGAATCTAGCACACACAACCTGTTCGACAGAATGCCAAGCCAACATAAGGTGTTCAAGGATGATGAAAGGATAGCAGAGCCCGTTCCCATCAAGTCCACCATGAACAAGGAGGGAATATCCATGGACGAAGCTTTAGATCGGATTCTTGAGAGGTTTGAGTTGATGGAGGCCAACCGTAGACAAGAGGGAAGTTCAATCAAATACTACAGAAGTTGGAGGAGGTAG
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| Protein seq | MLHSQEKEQNRDQTGIGGFGGGGDLSYSVRGISHHGGLRKAEVQGGGRIGQGGVQESSTHNLFDRMPSQHKVFKDDERIAEPVPIKSTMNKEGISMDEALDRILERFELMEANRRQEGSSIKYYRSWRR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.272024 | 0.354165 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0002420 | SBH | 0.000000 | 0.0 | 0.236469 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0002550 | SBH | 0.000000 | 0.000000 | 0.598763 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0002490 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0002340 | SBH | 0.0 | 0.024589 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0002330 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0031600 | SBH | 0.0983385 | 0.0708625 | 0.220605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0002160 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0002320 | SBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0002470 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0002360 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0002550 | SBH | 0.084869 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G002480 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0002360 | RBH | 0.0 | 0.0 | 0.0 |
