Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0013400 | OGI:01003380 | 6/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:811971-814953 | ||||||||
| Gene Symbol | RLCK9, OsRLCK9, - | ||||||||||
| DNA seq | ATGAGTAGCAAATTCCTCGCCATATATCTCCTGCTTGCTTTCCTCAGCCATGGCACCTGCAGCTACATGGCCACCACAGCTTCAGGCTGGGATGACCACGACTTCTTCAGGCATTGTCCACCGTCCCGGTGCAGCAAGGATGGACCAGAGATCCGTTTCCCTCACCGGCTTGAATCCAGCAATACATCATCAGCATGCGGCGCTTCATGCGCGAGGCTAGCATGCTCTGGCCAAGACACCATCCTACATCACCCAATTCTGGGGCCTTGCAAGGTCACCTCCATAGATTACAAGGAGGCCGTCATCAACATCATCCATCTCCTTCCGTTTCCATGCCCTCTCCAGAAGCTCATGGTCGACAGTTTACCGCCTGATGACTACCATGGCTGTAACTTATACAGGAGGATTCCTGCAAAAATAGTAAGCTGCTCAAAAGAGTTTACACCAAGTGGTACCTCTCCAGTTCCGTACGAACTTGACCATCTCCAGAATGCTGCCGAAATTATCTTCGGCCCAATATCCTGCCTTAGCGGCACAGGACAGTACTTCTCATATTTGGTGCATGCTCAGCTATACATGTATTTGCTTCCATTGGATTGCAGGATCGTCTCCAGAGGCTCCATTCCAATTCCTGGCTCAGACTCCTGCAGTGGCCCAACGTTCAAGGAAAAAGCAGAAAAATTCATCAACTTTGCTGAGACGACTGTCAGTTGGGGGTCCTTTCAAGATGGAGTTCTCGACAACTGCATGGCGTGTGAACGTCAAAAGCAACTCTGTGCATTCAGCTCACGAAGGAATCAAACATTCTGCACAAGCCACGGCAATCATCATGGTACTAACTATCCTAACTGCACAAACATGATCGTACCACCCAGCTTTGTTCCTGAACTAGTTTTCTACTCTTACTATGATTCAAGCATTCAGCCATACAGTACTAGTGCACCGCTCTCAATACATATGCTCAAAACTATTTTTGCAGGCTAGTAGCCTACTACTAGAAATCATTTAGGGAACTAACTAGCTTCATCAAACATTTTTGCACAATTGCCATAAAAGTGTCACAATATTTAGTAAAATAATGACAGAATTATTTTGATCAACTAGCAGCAGTTGGACGATACATGACATTAAAGATCATAAAACCTGGGACTTCTCAAAGATATTTGCTAGAATTGATATTGTCTATGAACTTATTGAGACTGCCTCTATAAGACTTCCTTATGGTTTCCTCTAGAAGTAGAAAGTAGCTCGAATATGTAAACAAGACTGCAAGGGAACACTTGACTGGGACAAGATATAATCTAAGTTTTTTTTTATTTTTTTGCCAGGTCGGCGAAAGGAAGCCGACCAAAATTCATTAAGATAAAGGAATAATTACAGAGGTATACACGATATAATCTAAGTTTTGGTTTGTTACCTGATATAACAGGAGCTGCAGTTAGATCTTTGGTTGCTTTGATAATAGATTAGTAGACATGGGAGGTGATATGTGGAAGCCTTTATAATTTAGCCCATAACCCACCTCAACTCATCCTAATCATCCTTATCTGGCATGACAAAAATACGAGAGTTAGCACACAGAACTGTCTTATGATGATACTGCAAAATAAGATGTAAGGAAAATTTCACTATTGCAAATATATTCATATGATCATGGTGCATAAAAATTTAGAGCCAAAACTCTATCCTACCCCACCAGGGCCATGTTCGCTGATACATTTTGTTGGATTGCTCTGTTTTTATTTTCAAGATGTAATTATCCATTATCTGTTAAAACCACCAACCAGAACTTATTATCTTCGTTCATACTTGCAGGTTCGCGTGTGAAAGTCATTTCAGGTACTGCAGTACTCAAACCTACCTTTCTATTAAAAAGAGAAAAGAAACAATGTTATCAGTACATATAAATTCTTATTGCTAGCAGTTCTGAGTCTTCTGACTCAGCATTCTTCTGCTAAAAAAGACACCACCTGCTCTTACAGTACCCATCAGGCAATCACAATCAGTTGATTACTAGCCACAACTTTCGATCCTAATGCAATGTGCTAATTTCCCCTTCTCTGTTAATTCAGCTACATCATCGGTAGCCGCATTTGTTGTTTTTTCGTTCATCATGGCCACAGCACTCTATCTTTCACTGAAGTCAAGGTATGATGAAGAGGTACATTTGAAGGTTGAAATGTTCCTCAGGACATATGGCACATCGAAGCCCACAAGGTACAGTTTCTCTGATGTTAAGAAGATAACGAGACGCTTCAAGGAACAATTAGGTCAGGGTGGATTTGGAAGTGTATACAAAGGACGACTACCAAACGGAGTGCCTGTGGCAGTTAAAATGATAGAACACTCTACAGGAAATGGAGAAGAGTTCATCAATGAAGTAGCAACAATTGGACAAATTCATCATATAAACATTGCCCGCCTTCTGGGATTCTGCTCTGAAGGAACACGGCACATTCTTATCTATGAATTCATGCCTAATGAATCATTGGAGAAATGCATATTCTTGCATGACCCTAATACTTCTCAAGAACTCCTAGCACCAAAAAAGATGTTAGATGTTGCCTTAGGCATTGCCCGAGGAATGGAGTATCTTCATCAAGGATGCAACCAACGCATCCTCCATTTTGATATCAAGCCTAATAATATATTGCTTGACTATAACTTCAATCCGAAGATTTCAGACTTTGGTCTTGCAAAGCTGTGTGCAAGGGACCAAAGCATTGTTACCTTGACCAAAGCAAGAGGCACGATGGGCTACATTGCACCAGAGCTATATTCTAGGAACTTTGGGGAGATATCTTACAAGTCAGATGTATACAGTTTTGGCATGCTTGTGTTAGAAATGGTTAGTGGAAGGAGGAACTCAGACCCGAGTATTCAGAACCAAAATGAGGTCTACTTTCCAGAGTGGATCTATGAGAAAGTAATTACTGAGCAGGACTTTGTACTTAGTAGGGAAATGACAGAAGAAGTAGACTGA
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| CDS seq | ATGAGTAGCAAATTCCTCGCCATATATCTCCTGCTTGCTTTCCTCAGCCATGGCACCTGCAGCTACATGGCCACCACAGCTTCAGGCTGGGATGACCACGACTTCTTCAGGCATTGTCCACCGTCCCGGTGCAGCAAGGATGGACCAGAGATCCGTTTCCCTCACCGGCTTGAATCCAGCAATACATCATCAGCATGCGGCGCTTCATGCGCGAGGCTAGCATGCTCTGGCCAAGACACCATCCTACATCACCCAATTCTGGGGCCTTGCAAGGTCACCTCCATAGATTACAAGGAGGCCGTCATCAACATCATCCATCTCCTTCCGTTTCCATGCCCTCTCCAGAAGCTCATGGTCGACAGTTTACCGCCTGATGACTACCATGGCTGTAACTTATACAGGAGGATTCCTGCAAAAATAGTAAGCTGCTCAAAAGAGTTTACACCAAGTGGTACCTCTCCAGTTCCGTACGAACTTGACCATCTCCAGAATGCTGCCGAAATTATCTTCGGCCCAATATCCTGCCTTAGCGGCACAGGACAGTACTTCTCATATTTGGTGCATGCTCAGCTATACATGTATTTGCTTCCATTGGATTGCAGGATCGTCTCCAGAGGCTCCATTCCAATTCCTGGCTCAGACTCCTGCAGTGGCCCAACGTTCAAGGAAAAAGCAGAAAAATTCATCAACTTTGCTGAGACGACTGTCAGTTGGGGGTCCTTTCAAGATGGAGTTCTCGACAACTGCATGGCGTGTGAACGTCAAAAGCAACTCTGTGCATTCAGCTCACGAAGGAATCAAACATTCTGCACAAGCCACGGCAATCATCATGGTTCGCGTGTGAAAGTCATTTCAGCTACATCATCGGTAGCCGCATTTGTTGTTTTTTCGTTCATCATGGCCACAGCACTCTATCTTTCACTGAAGTCAAGGTATGATGAAGAGGTACATTTGAAGGTTGAAATGTTCCTCAGGACATATGGCACATCGAAGCCCACAAGGTACAGTTTCTCTGATGTTAAGAAGATAACGAGACGCTTCAAGGAACAATTAGGTCAGGGTGGATTTGGAAGTGTATACAAAGGACGACTACCAAACGGAGTGCCTGTGGCAGTTAAAATGATAGAACACTCTACAGGAAATGGAGAAGAGTTCATCAATGAAGTAGCAACAATTGGACAAATTCATCATATAAACATTGCCCGCCTTCTGGGATTCTGCTCTGAAGGAACACGGCACATTCTTATCTATGAATTCATGCCTAATGAATCATTGGAGAAATGCATATTCTTGCATGACCCTAATACTTCTCAAGAACTCCTAGCACCAAAAAAGATGTTAGATGTTGCCTTAGGCATTGCCCGAGGAATGGAGTATCTTCATCAAGGATGCAACCAACGCATCCTCCATTTTGATATCAAGCCTAATAATATATTGCTTGACTATAACTTCAATCCGAAGATTTCAGACTTTGGTCTTGCAAAGCTGTGTGCAAGGGACCAAAGCATTGTTACCTTGACCAAAGCAAGAGGCACGATGGGCTACATTGCACCAGAGCTATATTCTAGGAACTTTGGGGAGATATCTTACAAGTCAGATGTATACAGTTTTGGCATGCTTGTGTTAGAAATGGTTAGTGGAAGGAGGAACTCAGACCCGAGTATTCAGAACCAAAATGAGGTCTACTTTCCAGAGTGGATCTATGAGAAAGTAATTACTGAGCAGGACTTTGTACTTAGTAGGGAAATGACAGAAGAAGTAGACTGA
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| Protein seq | MSSKFLAIYLLLAFLSHGTCSYMATTASGWDDHDFFRHCPPSRCSKDGPEIRFPHRLESSNTSSACGASCARLACSGQDTILHHPILGPCKVTSIDYKEAVINIIHLLPFPCPLQKLMVDSLPPDDYHGCNLYRRIPAKIVSCSKEFTPSGTSPVPYELDHLQNAAEIIFGPISCLSGTGQYFSYLVHAQLYMYLLPLDCRIVSRGSIPIPGSDSCSGPTFKEKAEKFINFAETTVSWGSFQDGVLDNCMACERQKQLCAFSSRRNQTFCTSHGNHHGSRVKVISATSSVAAFVVFSFIMATALYLSLKSRYDEEVHLKVEMFLRTYGTSKPTRYSFSDVKKITRRFKEQLGQGGFGSVYKGRLPNGVPVAVKMIEHSTGNGEEFINEVATIGQIHHINIARLLGFCSEGTRHILIYEFMPNESLEKCIFLHDPNTSQELLAPKKMLDVALGIARGMEYLHQGCNQRILHFDIKPNNILLDYNFNPKISDFGLAKLCARDQSIVTLTKARGTMGYIAPELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSIQNQNEVYFPEWIYEKVITEQDFVLSREMTEEVD |
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| Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0013400 | OsMH63_01T0013400.1 | Chr01 | 811971 | 814953 | + | maker | ||
| CDS seq | ATGAGTAGCAAATTCCTCGCCATATATCTCCTGCTTGCTTTCCTCAGCCATGGCACCTGCAGCTACATGGCCACCACAGCTTCAGGCTGGGATGACCACGACTTCTTCAGGCATTGTCCACCGTCCCGGTGCAGCAAGGATGGACCAGAGATCCGTTTCCCTCACCGGCTTGAATCCAGCAATACATCATCAGCATGCGGCGCTTCATGCGCGAGGCTAGCATGCTCTGGCCAAGACACCATCCTACATCACCCAATTCTGGGGCCTTGCAAGGTCACCTCCATAGATTACAAGGAGGCCGTCATCAACATCATCCATCTCCTTCCGTTTCCATGCCCTCTCCAGAAGCTCATGGTCGACAGTTTACCGCCTGATGACTACCATGGCTGTAACTTATACAGGAGGATTCCTGCAAAAATAGTAAGCTGCTCAAAAGAGTTTACACCAAGTGGTACCTCTCCAGTTCCGTACGAACTTGACCATCTCCAGAATGCTGCCGAAATTATCTTCGGCCCAATATCCTGCCTTAGCGGCACAGGACAGTACTTCTCATATTTGGTGCATGCTCAGCTATACATGTATTTGCTTCCATTGGATTGCAGGATCGTCTCCAGAGGCTCCATTCCAATTCCTGGCTCAGACTCCTGCAGTGGCCCAACGTTCAAGGAAAAAGCAGAAAAATTCATCAACTTTGCTGAGACGACTGTCAGTTGGGGGTCCTTTCAAGATGGAGTTCTCGACAACTGCATGGCGTGTGAACGTCAAAAGCAACTCTGTGCATTCAGCTCACGAAGGAATCAAACATTCTGCACAAGCCACGGCAATCATCATGGTTCGCGTGTGAAAGTCATTTCAGCTACATCATCGGTAGCCGCATTTGTTGTTTTTTCGTTCATCATGGCCACAGCACTCTATCTTTCACTGAAGTCAAGGTATGATGAAGAGGTACATTTGAAGGTTGAAATGTTCCTCAGGACATATGGCACATCGAAGCCCACAAGGTACAGTTTCTCTGATGTTAAGAAGATAACGAGACGCTTCAAGGAACAATTAGGTCAGGGTGGATTTGGAAGTGTATACAAAGGACGACTACCAAACGGAGTGCCTGTGGCAGTTAAAATGATAGAACACTCTACAGGAAATGGAGAAGAGTTCATCAATGAAGTAGCAACAATTGGACAAATTCATCATATAAACATTGCCCGCCTTCTGGGATTCTGCTCTGAAGGAACACGGCACATTCTTATCTATGAATTCATGCCTAATGAATCATTGGAGAAATGCATATTCTTGCATGACCCTAATACTTCTCAAGAACTCCTAGCACCAAAAAAGATGTTAGATGTTGCCTTAGGCATTGCCCGAGGAATGGAGTATCTTCATCAAGGATGCAACCAACGCATCCTCCATTTTGATATCAAGCCTAATAATATATTGCTTGACTATAACTTCAATCCGAAGATTTCAGACTTTGGTCTTGCAAAGCTGTGTGCAAGGGACCAAAGCATTGTTACCTTGACCAAAGCAAGAGGCACGATGGGCTACATTGCACCAGAGCTATATTCTAGGAACTTTGGGGAGATATCTTACAAGTCAGATGTATACAGTTTTGGCATGCTTGTGTTAGAAATGGTTAGTGGAAGGAGGAACTCAGACCCGAGTATTCAGAACCAAAATGAGGTCTACTTTCCAGAGTGGATCTATGAGAAAGTAATTACTGAGCAGGACTTTGTACTTAGTAGGGAAATGACAGAAGAAGTAGACTGA
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| Protein seq | MSSKFLAIYLLLAFLSHGTCSYMATTASGWDDHDFFRHCPPSRCSKDGPEIRFPHRLESSNTSSACGASCARLACSGQDTILHHPILGPCKVTSIDYKEAVINIIHLLPFPCPLQKLMVDSLPPDDYHGCNLYRRIPAKIVSCSKEFTPSGTSPVPYELDHLQNAAEIIFGPISCLSGTGQYFSYLVHAQLYMYLLPLDCRIVSRGSIPIPGSDSCSGPTFKEKAEKFINFAETTVSWGSFQDGVLDNCMACERQKQLCAFSSRRNQTFCTSHGNHHGSRVKVISATSSVAAFVVFSFIMATALYLSLKSRYDEEVHLKVEMFLRTYGTSKPTRYSFSDVKKITRRFKEQLGQGGFGSVYKGRLPNGVPVAVKMIEHSTGNGEEFINEVATIGQIHHINIARLLGFCSEGTRHILIYEFMPNESLEKCIFLHDPNTSQELLAPKKMLDVALGIARGMEYLHQGCNQRILHFDIKPNNILLDYNFNPKISDFGLAKLCARDQSIVTLTKARGTMGYIAPELYSRNFGEISYKSDVYSFGMLVLEMVSGRRNSDPSIQNQNEVYFPEWIYEKVITEQDFVLSREMTEEVD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.85744 | 0.925935 | 1.294337 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0114900 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02420 | RBH | 0.000000 | 0.041894 | 0.088127 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0114900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001220 | SBH | 0.136429 | 1.008476 | 0.429167 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001080 | SBH | 0.069754 | 0.307502 | 0.332710 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001110 | RBH | 0.0 | 0.0 | 0.643239 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001120 | SBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001150 | RBH | 3.586691 | 2.446679 | 2.675282 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0016100 | SBH | 0.4271795 | 0.5069765 | 0.8147205 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001070 | SBH | 0.206319 | 0.096424 | 0.315710 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0014100 | RBH | 0.775726 | 0.6080485 | 4.9162665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001130 | SBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001280 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001090 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001100 | RBH | 0.0 | 0.116485 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001090 | SBH | 0.089580 | 0.894961 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001280 | SBH | 0.076288 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0000980 | SBH | 0.068539 | 1.712051 | 0.473257 |
