Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_12g0005310 | OGI:12011030 | 7/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr12:4025155-4031125 | ||||||||
| Gene Symbol | RLCK362, OsRLCK362 | ||||||||||
| DNA seq | tcatctcttcagtcgaagctcgatgaccggctccatctccccttcatgtactcctccagcgacacgttcgccgccgtgaagtcggcgccgccgctgctgacggacgccgagtcgtcgacgacgtcgagcagcgcaaggttgatgtacgactggatgtccttcttctccggcgaagcgccatcgccatcgtcagtgtcatcgccggcggacagaccggcctgcgagctcgcccacctgacagcgtcgccatcgccgtcgagcagcttgagaacctaaacacattcagaggttgagaatggccgaatgacatggcaattcggaggtagtagtagcagtagcagctagtctctctcacatttgcaatgctaggccgccgttgcggcgatcgctggatgcagagggcggcggggagggtcatcctctcgacctcgccggcgacgtcgccgccgtccgtcggcaggctggggtcgacgaggtcagtgagctttcctccttgtatgatggtgttcgcccacatgaccaggctttccttgcccttgccgccgccggagctcaccggcttcctcccgGAgatgagctcgaggaggacgacgctgaaggcgtacacgatcgatcttgtcgctgaccttgccgtgcatgaagtactctggagccaagtacctgccatggagatgccagcttgatcacctcaagttcttttcctcacttgaattcttcatcaagaagaagaagaAGaagaagcagctgcagctacaaacccgaatttgccggcgacatcgtcgccggtgaccggagacgccgcctccgccgcccagagcgcgaggccgaagtcacacagctgtgcatcacgtatcacacaggttcagatttttgctatgttgacaaatatctctgaagaatcaagaatctgatctgaagaaatgtttttacctttggttggaaatcttcagagacgaggatgttggacgacttgacgtccctatggatcaccggccggccgtcgccgtcgccgccatggaggtacacgagcgctcgtgctactccggcggccaccttgaacctctccggccaaccaaacaaatcttttccctccttttcacctgcgcaaacaacacaacagcaatgcaacatcgatcaagaaatgatcaaaatgttcagagaacttgcattttataacttgtgaatttactatttacatttacacaccgtgcaagatctcctcgaggctgcctctcgccatgtagtcgtagaccagcatgagcttggcgctgccgccgtcgtcgtcgaggcagaacccggcgagcggcatggtgttgtcgtggcggacggagctgacgatccccatctcctagacgagctcctccatcaccttgtctgaagatttcagcaccttcactgcaacctccttgccatcatcacagcaacccttgtacacctcgcccgcccctcctttggcctttgccaattatccgatctgagcaatcccaatccgatccaatggatcatgaattcatcatcgttcagctcagttcatccgaatttttgatattttcacatacatatgtactaggTttttttttttacctggagagaagttggaagtgattctttgttaacaacccaatacacaaatcacaatgaaccaatatccagtacaagcaatggaggtggaggtggttttgagctgcaattgtattactacaaccaagctttgtggtggaaatgggagtgaacaggggatacaagttactagcagaagtagggaggaagaaggagatcgacaaggaggcaagcccgcctccaggtcgccgccgccgccgttcgccgccttgccaattgatctcttcgatagcccctgaaagtgcaaccctgctgttttgtagttctcctccttgtcttggttgggctaggcttagaaggtcactgaactggcccacattgcagcccacaagatttcctaacaatccccatttcttgaaatttggtttgtccccaagccgatgaccttaaatgtggaaacttcaccaacggatatgtttgatgcaatgatttatacttgatttcctctgttaatgcttctcttgtaatgtagccaatgtgacaagaagaatgcccagccagtgtcacacGAgagccgcctggatcccatggtatactcaaggaattaatgatcaccaattttgctgaaccatattgcttcaaaagttgcaggaccagatcaactttcacgtccctgataacatccagtgcacaccaacaaagtccacaatcttgtcgccctttcaatacaatgcttctacttgaaaaatctctagtccacctattgtttccatcctccagtacatcaacatgcttcagttttggccaaaggatagaatcccgtaccgatatgtccgtagcctcatcaatcacccttctttccttcgcagtaccgatatgatacacatggccgacctgacccttgtgaagaaccacctcaaaagcttatgcaacgtcatcacaatacaaatagcttctgacatttgagccattaccatgaattggcaGgggcaatcctctcatggtcaaaggaatcaatctgggaatgagcttctcatgcaattgatttggcccatatacgttgttgccctgagttgtaatcatagcaagatgaaatgttgttgtgattatagcagcacacatgatcaggatcaagtagttgcagcccactgcaattagaccatttagcattccctgtgtaactttttcttcatcacccacataatggaaatgttccaagataagtaatgccaccaaggtatccttctgtgatccatcaattttttcatgatttaaatctcctttaggtgcacaaGataatgcaacagaaagtgcttcgtttcttatgcaattggcactgcaaaaatcatctcccatagaacattcacaatctggtgctgaccatgggactttcagttcagtccacctcccgcctgtgctacattgacttgattgtgggtcaggccacggtttcagctctaccatcctcagccatgagtttgccaccagccaaagcattatggttccaatttgagtcgatggtggccaaggtggcatcaaagataatcttgtcctaaaatagttgaagtccagccagggcacatgccacaactcccatattccattaacttgataaactgagttaggaggcgaccaagggtttcgcttgcactgctccaataacaattgccacataacgtgtccccttacaggcaacaactcactgacacctttgtcaaagaatagcattgaacaccctgtaggcatcactatgaccaagtctatttcaacgatcttccttggtgagctaccttcaattgttgcatcaggtccaaaaacgcctttagtcatgtccactaaggtctggaacgtgaccacagtttggtcggcgccactattggagccaaggtccaacatcaaacacttggcgtgcgtcaccttggggtggtcaagattgttgatgtaagtggcaccgattgtgttcccagcagctaccaactccatagaggccgcggcagtggtggcggacgtaaccactgcagccacagtgagatcaggctcgacggtaggaccggagcatttcgtcgaacacatggtgggcgtgacctcgggtgagtccttggtgatgacacagggggcgtggcccttgtccttgttgtctcctagctcccaaggaactgttgtagcagtatcctcactaatgtgacttgaactagccgtcgcccaagtgaggttgttgttggggcattctgtcaaacacttggtaggcgctagagtaggtggtgccatgggtgctgtaggtgatgtagccttgagaatagcagtagttgccctgatggatgcaattgtctcctcggcagccttgctcctacgagcctctacctcctccaacttctgtagtatttgattgaacttctcctcttgtctacggttggcctccatcaactcaaacttctcaagaatccgatctaaagcttcatccatggatattccctccttgttcatggtggacttgatgggaacgggctctgctatcctttcatcatccttgaacaccttatgttggcttgtcattctgtcgaacaggttgtgtgcgctagattcttgaacacctcccttgcccaattcttcttccaccttgcactgctgccttcccaagacctcaatgacgagaaatcccacgaaccgagcagctctgataccagattgttaacaacccaatacacaaatcacaacgaaccaatatccagtacaagcaatggaggtgaaggtagttttgagctgcaattgtattactacaactcaagctttgtggtggaaatgggagtgaacaagggatacaagttactagcagaagtagggaggaagaaggagatcgacaaggaggcaagcccgcctccaggtcgccaccgccgccgttcgccgccttgctaattgatctcttcgatagcccctgaaagtgcagccctgctgttttgtagttctcctccttgtcttggttgggctaggcttagaaggtcactgaactggcccacattgcagcccacaagatttcctaacattcttgcaagctcgctgtagctgaacatggtgtacttggatgagtacttgtttctcagcgaggcaagctcttctgcaacttgctccgccgcatcatcgatcgccggagatggagtctccgatgcggtgatggccggtgagattgcttgatcgccggagttcttgcgtggatttaatggcgatagcgcaggacaccggctcggcagctgcattgcccactgcgccaccgacatctccgtccactctggcatggcggatttcaggtccggcgagaggagcggccagccggacttcgcctgacgtggcgtgaacgctactaccggcgagacaggggcgctcgccggcgtcgagatgttccggcgaaggagccgggcgccgccggcgatcgccgagtcgtcctgggatttctcgcgggtgatcatcgtcgccgctctgacgagcttccggtaaatcctccgcggcgtctccaccactgcagcagaagtagcattccaacatttgttcagccaaaatttaccaaacaaaaaacaaattcaaacaaaataacgaattcggatgaaacaagattaacataacattgcaaatgacaaatattcatgaacaaatttcagagaagattaacataacattgcaaatgacaaatattcatgaacaaatttcagagaaaaattgtaagtgcaatttagcgtacgtgggctgatgcattggttgtgcgcggcttctctccggtacacgaccctgccattgccgacggcgaggaccgagcagctctggggcactctcttctcgcagtacttcgccaccgcggcggaggacgaggacgaggacgaccggagatggctccgggagttgtttgtgacgccgaggatgaggtgcgccgcgccataggagctcgcctcgttcacgagagtcctcttgatggacgatccatggaagatcctgagctccaggatgatctgagaaggcggcgaggaattcgtcagccagccattggaggcgatcgagcgagagattctcggatcaagatccgatttgggggaagattttgccgggaatgtggcgaaactggaacctggttgagaacgcagaagccgtcgtacgcgcggagcaaggcggcgagtgattccgctgctctgatcttctcaaccactctcatggctgctcctttatcggcggcggcggcggcggtggcggcgacgggtgtggcgacgtggagcgcgacgacgcggtcgccggcggaggcgaccatggcgagcgcccaggtgagcagctccctCccctctgcgtcgtcccgtacaccaaccaccaccgtcctccctccccaCccccaagttggccccaactgcggcggcgccggcgacctaagcttcat
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| CDS seq | atgaagcttaggtcgccggcgccgccgcagttggggccaacttggggGtggggagggaggacggtggtgatcatcctggagctcaggatcttccatggatcgtccatcaagaggactctcgtgaacgaggcgagctcctatggcgcggcgcacctcatcctcggcgtcacaaacaactcccggagccatctccggtcgtcctcgtcctcgtcctccgccgcggtggcgaagtactgcgagaagagagtgccccagagctgctcggtcctcgccgtcggcaatggcagggtcgtgtaccggagagaagccgcgcacaaccaatgcatcagcccactggtggagacgccgcggaggatttaccggaagctcgtcagagcggcgacgatgatcacccgcgagaaatcccaggacgactcggcgatcgccggcggcgcccggctccttcgccggaacatctcgacgccggcgagcgcccctgtctcgccggtagtagcgttcacgccacgtcaggcgaagtccggctggccgctcctctcgccggacctgaaatccgccatgccagagtggacggagatgtcggtggcgcagtgggcaatgcagctgccgagccggtgtcctgcgctatcgccattaaatccacgcaagaactccggcgatcaagcaatctcaccggccatcaccgcatcggagactccatctccggcgatcgatgatgcggcggagcaagttgcagaagagcttgcctcgctgagaaacaagtactcatccaagtacaccatgttcagctacagcgagcttgcaagaatagctgctcggttcgtgggatttctcgtcattgaggtcttgggaaggcagcagtgcaaggtggaagaagaattgggcaagggaggtgttcaagaatctagcgcacacaacctgttcgacagaatgacaagccaacataaggtgttcaaggatgatgaaaggatagcagagcccgttcccatcaagtccaccatgaacaaggagggaatatccatggatgaagctttagatcggattcttgagaagtttgagttgatggaggccaaccgtagacaagaggagaagttcaatcaaatactacagaagttggaggaggtagaggctcgagacaacaaggacaagggccacgccccctgtgtcatcaccaaggactcacccgaggtcacgcccaccatgtgttcgacgaaatgctccggtcctaccgtcgagcctgatctcactgtggctgcagtggttacgtccgccaccactgccgcggcctctatggagttggtagctgctgggaacacaatcggtgccacttacatcaacaatcttgaccaccccaaggtgacgcacgccaagtgtttgatgttggaccttggctccaatagtggcgccgaccaaactgtggtcacgttccagaccttagtggacatgactaaaggcgtttttggacctgatgcaacaattgaaggtagctcaccaaggaagatcgttgaaatagacttggtcatagtgatgcctacagggtgttcaatgctattctttgacaaaggtgtcagtgagttgttgcctgtaaggggacacgttatgtggcaattgttattggagcagtgcaagcgaaacccttggtcgcctcctaactcagtttatcaagttaatggaatatgggagttgtggcatgtgccctggctggacttcaactattttaggacaagattatctttgatgccaccttggccaccatcgactcaaattggaaccataatgctttggctggtggcaaactcatggctgaggatggtagagctgaaaccgtggcctgacccacaatcaagtcaatgtagcacaggcgggaggtggactgaactgaaagtcccatggtcagcaccagattgtgaatgttctatgggagatgatttttgcagtgccaattgcataagaaacgaagcactttctgttgcattatCttgtgcacctaaaggagatttaaatcatgaaaaaattgatggatcacagaaggataccttggtggcattacttatcttggaacatttccattatgtgggtgatgaagaaaaagttacacagggaatgctaaatggtctaattgcagtgggctgcaactacttgatcctgatcatgtgtgctgctataatcacaacaacatttcatcttgctatgattacaactcagggcaacaacgtatatgggccaaatcaattgcatgagaagctcattcccagattgattcctttgaccatgagaggattgcccCtgccaattcatggtaatggctcaaatgtggttcttcacaagggtcaggtcggccatgtgtatcatatcggtactgcgaaggaaagaagggtgattgatgaggctacggacatatcggtacgggattctatcctttggccaaaactgaagcatgttgatgtactggaggatggaaacaataggtggactagagatttttcaagtagaagcattgtattgaaagggcgacaagattgtggactttgttggtgtgcactggatgttatcagggacgtgaaagttgatctggtcctgcaacttttgaagcaatatggttcagcaaaattggtgatcattaattccttgagtataccatgggatccaggcggctcTCgtgccaaaggaggggcgggcgaggtgtacaagggttgctgtgatgatggcaaggaggttgcagtgaaggtgctgaaatcttcagacaaggtgatggaggagctcgtctag
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| Protein seq | MKLRSPAPPQLGPTWGWGGRTVVIILELRIFHGSSIKRTLVNEASSYGAAHLILGVTNNSRSHLRSSSSSSSAAVAKYCEKRVPQSCSVLAVGNGRVVYRREAAHNQCISPLVETPRRIYRKLVRAATMITREKSQDDSAIAGGARLLRRNISTPASAPVSPVVAFTPRQAKSGWPLLSPDLKSAMPEWTEMSVAQWAMQLPSRCPALSPLNPRKNSGDQAISPAITASETPSPAIDDAAEQVAEELASLRNKYSSKYTMFSYSELARIAARFVGFLVIEVLGRQQCKVEEELGKGGVQESSAHNLFDRMTSQHKVFKDDERIAEPVPIKSTMNKEGISMDEALDRILEKFELMEANRRQEEKFNQILQKLEEVEARDNKDKGHAPCVITKDSPEVTPTMCSTKCSGPTVEPDLTVAAVVTSATTAAASMELVAAGNTIGATYINNLDHPKVTHAKCLMLDLGSNSGADQTVVTFQTLVDMTKGVFGPDATIEGSSPRKIVEIDLVIVMPTGCSMLFFDKGVSELLPVRGHVMWQLLLEQCKRNPWSPPNSVYQVNGIWELWHVPWLDFNYFRTRLSLMPPWPPSTQIGTIMLWLVANSWLRMVELKPWPDPQSSQCSTGGRWTELKVPWSAPDCECSMGDDFCSANCIRNEALSVALSCAPKGDLNHEKIDGSQKDTLVALLILEHFHYVGDEEKVTQGMLNGLIAVGCNYLILIMCAAIITTTFHLAMITTQGNNVYGPNQLHEKLIPRLIPLTMRGLPLPIHGNGSNVVLHKGQVGHVYHIGTAKERRVIDEATDISVRDSILWPKLKHVDVLEDGNNRWTRDFSSRSIVLKGRQDCGLCWCALDVIRDVKVDLVLQLLKQYGSAKLVIINSLSIPWDPGGSRAKGGAGEVYKGCCDDGKEVAVKVLKSSDKVMEELV |
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| Function | Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 [UniProtKB/Swiss-Prot:Q9LH76] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_12g0005310 | OsLima_12g0005310.01 | Chr12 | 4025155 | 4031125 | - | NAM | ||
| CDS seq | atgaagcttaggtcgccggcgccgccgcagttggggccaacttggggGtggggagggaggacggtggtgatcatcctggagctcaggatcttccatggatcgtccatcaagaggactctcgtgaacgaggcgagctcctatggcgcggcgcacctcatcctcggcgtcacaaacaactcccggagccatctccggtcgtcctcgtcctcgtcctccgccgcggtggcgaagtactgcgagaagagagtgccccagagctgctcggtcctcgccgtcggcaatggcagggtcgtgtaccggagagaagccgcgcacaaccaatgcatcagcccactggtggagacgccgcggaggatttaccggaagctcgtcagagcggcgacgatgatcacccgcgagaaatcccaggacgactcggcgatcgccggcggcgcccggctccttcgccggaacatctcgacgccggcgagcgcccctgtctcgccggtagtagcgttcacgccacgtcaggcgaagtccggctggccgctcctctcgccggacctgaaatccgccatgccagagtggacggagatgtcggtggcgcagtgggcaatgcagctgccgagccggtgtcctgcgctatcgccattaaatccacgcaagaactccggcgatcaagcaatctcaccggccatcaccgcatcggagactccatctccggcgatcgatgatgcggcggagcaagttgcagaagagcttgcctcgctgagaaacaagtactcatccaagtacaccatgttcagctacagcgagcttgcaagaatagctgctcggttcgtgggatttctcgtcattgaggtcttgggaaggcagcagtgcaaggtggaagaagaattgggcaagggaggtgttcaagaatctagcgcacacaacctgttcgacagaatgacaagccaacataaggtgttcaaggatgatgaaaggatagcagagcccgttcccatcaagtccaccatgaacaaggagggaatatccatggatgaagctttagatcggattcttgagaagtttgagttgatggaggccaaccgtagacaagaggagaagttcaatcaaatactacagaagttggaggaggtagaggctcgagacaacaaggacaagggccacgccccctgtgtcatcaccaaggactcacccgaggtcacgcccaccatgtgttcgacgaaatgctccggtcctaccgtcgagcctgatctcactgtggctgcagtggttacgtccgccaccactgccgcggcctctatggagttggtagctgctgggaacacaatcggtgccacttacatcaacaatcttgaccaccccaaggtgacgcacgccaagtgtttgatgttggaccttggctccaatagtggcgccgaccaaactgtggtcacgttccagaccttagtggacatgactaaaggcgtttttggacctgatgcaacaattgaaggtagctcaccaaggaagatcgttgaaatagacttggtcatagtgatgcctacagggtgttcaatgctattctttgacaaaggtgtcagtgagttgttgcctgtaaggggacacgttatgtggcaattgttattggagcagtgcaagcgaaacccttggtcgcctcctaactcagtttatcaagttaatggaatatgggagttgtggcatgtgccctggctggacttcaactattttaggacaagattatctttgatgccaccttggccaccatcgactcaaattggaaccataatgctttggctggtggcaaactcatggctgaggatggtagagctgaaaccgtggcctgacccacaatcaagtcaatgtagcacaggcgggaggtggactgaactgaaagtcccatggtcagcaccagattgtgaatgttctatgggagatgatttttgcagtgccaattgcataagaaacgaagcactttctgttgcattatCttgtgcacctaaaggagatttaaatcatgaaaaaattgatggatcacagaaggataccttggtggcattacttatcttggaacatttccattatgtgggtgatgaagaaaaagttacacagggaatgctaaatggtctaattgcagtgggctgcaactacttgatcctgatcatgtgtgctgctataatcacaacaacatttcatcttgctatgattacaactcagggcaacaacgtatatgggccaaatcaattgcatgagaagctcattcccagattgattcctttgaccatgagaggattgcccCtgccaattcatggtaatggctcaaatgtggttcttcacaagggtcaggtcggccatgtgtatcatatcggtactgcgaaggaaagaagggtgattgatgaggctacggacatatcggtacgggattctatcctttggccaaaactgaagcatgttgatgtactggaggatggaaacaataggtggactagagatttttcaagtagaagcattgtattgaaagggcgacaagattgtggactttgttggtgtgcactggatgttatcagggacgtgaaagttgatctggtcctgcaacttttgaagcaatatggttcagcaaaattggtgatcattaattccttgagtataccatgggatccaggcggctcTCgtgccaaaggaggggcgggcgaggtgtacaagggttgctgtgatgatggcaaggaggttgcagtgaaggtgctgaaatcttcagacaaggtgatggaggagctcgtctag
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| Protein seq | MKLRSPAPPQLGPTWGWGGRTVVIILELRIFHGSSIKRTLVNEASSYGAAHLILGVTNNSRSHLRSSSSSSSAAVAKYCEKRVPQSCSVLAVGNGRVVYRREAAHNQCISPLVETPRRIYRKLVRAATMITREKSQDDSAIAGGARLLRRNISTPASAPVSPVVAFTPRQAKSGWPLLSPDLKSAMPEWTEMSVAQWAMQLPSRCPALSPLNPRKNSGDQAISPAITASETPSPAIDDAAEQVAEELASLRNKYSSKYTMFSYSELARIAARFVGFLVIEVLGRQQCKVEEELGKGGVQESSAHNLFDRMTSQHKVFKDDERIAEPVPIKSTMNKEGISMDEALDRILEKFELMEANRRQEEKFNQILQKLEEVEARDNKDKGHAPCVITKDSPEVTPTMCSTKCSGPTVEPDLTVAAVVTSATTAAASMELVAAGNTIGATYINNLDHPKVTHAKCLMLDLGSNSGADQTVVTFQTLVDMTKGVFGPDATIEGSSPRKIVEIDLVIVMPTGCSMLFFDKGVSELLPVRGHVMWQLLLEQCKRNPWSPPNSVYQVNGIWELWHVPWLDFNYFRTRLSLMPPWPPSTQIGTIMLWLVANSWLRMVELKPWPDPQSSQCSTGGRWTELKVPWSAPDCECSMGDDFCSANCIRNEALSVALSCAPKGDLNHEKIDGSQKDTLVALLILEHFHYVGDEEKVTQGMLNGLIAVGCNYLILIMCAAIITTTFHLAMITTQGNNVYGPNQLHEKLIPRLIPLTMRGLPLPIHGNGSNVVLHKGQVGHVYHIGTAKERRVIDEATDISVRDSILWPKLKHVDVLEDGNNRWTRDFSSRSIVLKGRQDCGLCWCALDVIRDVKVDLVLQLLKQYGSAKLVIINSLSIPWDPGGSRAKGGAGEVYKGCCDDGKEVAVKVLKSSDKVMEELV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_12g0005310 | OsLima_12g0005310.02 | Chr12 | 4025163 | 4026499 | - | NAM | ||
| CDS seq | atggggatcgtcagctccgtccgccacgacaacaccatgccgctcgccgggttctgcctcgacgacgacggcggcagcgccaagctcatgctggtctacgactacatggcgagaggcagcctcgaggagatcttgcacggtgaaaaggagggaaaagatttgtttggttggccggagaggttcaaggtggccgccggagtagcacgagcgctcgtgtacctccatggcggcgacggcgacggccggccggtgatccatagggacgtcaagtcgtccaacatcctcgtctctgaagatttccaaccaaagctgtgtgacttcggcctcgcgctctgggcggcggaggcggcgtctccggtcaccggcgacgatgtcgccggcaaattcgggtcagcgacaagatcgatcgtgtacgccttcagcgtcgtcctcctcgagctcatcTCcgggaggaagccggtgagctccggcggcggcaagggcaaggaaagcctggtcatgtgggcgaacaccatcatacaaggaggaaagctcactgacctcgtcgaccccagcctgccgacggacggcggcgacgtcgccggcgaggtcgagaggatgaccctccccgccgccctctgcatccagcgatcgccgcaacggcggcctagcattgcaaatgttctcaagctgctcgacggcgatggcgacgctgtcaggtgggcgagctcgcaggccggtctgtccgccggcgatgacactgacgatggcgatggcgcttcgccggagaagaaggacatccagtcgtacatcaaccttgcgctgctcgacgtcgtcgacgactcggcgtccgtcagcagcggcggcgccgacttcacggcggcgaacgtgtcgctggaggagtacatgaaggggagatggagccggtcatcgagcttcgactga
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| Protein seq | MGIVSSVRHDNTMPLAGFCLDDDGGSAKLMLVYDYMARGSLEEILHGEKEGKDLFGWPERFKVAAGVARALVYLHGGDGDGRPVIHRDVKSSNILVSEDFQPKLCDFGLALWAAEAASPVTGDDVAGKFGSATRSIVYAFSVVLLELISGRKPVSSGGGKGKESLVMWANTIIQGGKLTDLVDPSLPTDGGDVAGEVERMTLPAALCIQRSPQRRPSIANVLKLLDGDGDAVRWASSQAGLSAGDDTDDGDGASPEKKDIQSYINLALLDVVDDSASVSSGGADFTAANVSLEEYMKGRWSRSSSFD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr12 | 4025780 | 4025913 | - | OsLima_12g0005310.01 | OsLima_12g0005310.01,OsLima_12g0005310.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0181200 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g08060 | RBH | 0.121763 | 0.050891 | 0.092381 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0181200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0005340 | RBH | 0.086169 | 0.0 | 0.478768 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0005490 | SBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0005530 | SBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0005420 | RBH | 0.0 | 0.026602 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0005480 | SBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0067700 | SBH | 0.042762 | 0.7498245 | 0.19249 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0005450 | SBH | 0.0 | 0.183353 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0071900 | SBH | 0.203807 | 0.7364665 | 0.1552305 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0005260 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0005600 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0005480 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0005450 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0005490 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G005270 | SBH | 0.000000 | 0.406689 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0005520 | RBH | 0.0 | 0.922069 | 0.0 |
