Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_12g0005450 | OGI:12011090 | 10/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr12:4109858-4112780 | ||||||||
| Gene Symbol | RLCK361, OsRLCK361, RLCK362, OsRLCK362 | ||||||||||
| DNA seq | TCATTCTCTTCAGTCGAAGCTCGATGATCGACTCCATCTCCCCTTCATGTACTCCTCCAGCGACACGTTCGCCGCCGTGAAGTCGCCGCCGCCGCTGCTCACGGACGCCGAGTCGTCGTCGACGTCGAGCAGCGCAAGGTTGATGTACGACTGGATGTCCTTCTTCTCCGGCGAAGCGCCATCGCCATCGTCAGTGTCGTCGCCGGCGGACAGACCAGCCTGCGACCTCGCCCACCTGACGGCGTCGCCATCGCCGTCGAGCAGTTTCAGAACCTAAAAACATTCAGAGATCAGCAGCTTAGCAAGTTGAGAATAGCCGAATGACATGGCAATTCGGAGTAGTAGTTAGTCTCTCTCACATTTGCAATGCTAGGCCGGCGTTGCGGCGATCGCCGGATGCAGAGGGCGGCGGCGAGGGTCATCCTCTCGACCTCGCCGGCGACGCCGCTGCCGTCCGTCGGCAGGCTGGGGTCGACGAGGTCAGTGAGCTTTCCTCCTTGTATGATGGTGTTCGCCCACATGACCAGGCTCTCCTTGCCCTTGCCGCCGCCCGAGCTCACCAGCTTCCTCCCGGAGACGAGCTCGAGGAGGACGACGCCGAAGGCGTACACGTCGATCTTGTCGCTGACCTTGCCGTGCATGAAGTACTCTGGAGCCAAGTACCTGCCATGGAAATGCCAGCTTGATCACCTTAAGTTCTTTTCCTCACTTGAATTCTTCATCAAGAAGAAGAAGAAGCAGCTGCAGCTACAAACCCGAATGTGCCGGCGACATCGTCGCCGGTGACCGGAGACGCCGCCTCCGTCGCCCAGAGCGCGAGGCCGAAGTCACACAGCTGTGCATCACACATCACACAGGTTCAGATTTTTGCAGTGTTGTCGACAAATATCTCTGAAGAATCAAGAATCTGATCTGAAGAAATGTTTTTACCTTTGGTTGGAAATCTTCAGAGACGAGGATGTTGGACGACTTGACGTCCCTGTGGATCACCGGCCGGCCGTCGCCGTCGCCGCCGTGGAGGTACACGAGCGCTCGTGCTACTCCGGCGGCCACCTTGAACCTCTCCGGCCAACCAAACAGATCTTTTCCCTCCTTTTCACCTGCACAAACAAAAACAACAGCAATGCAACATCGATCAAGAAATGATCAAAATGTTCAGAGAACTTGCATTTTACAACTTGTGAATTACATTTACACACCGTGCAAGATCTCCTCGAGGCTGCCTCTCGCCATGTAGTCGTAGACCAGCATGAGCTTGGCGCCGCCGCCGCCGTCGTCGAGGCAGAACCCGGCGAGCGGCATGGCGTTGCCGTGGCGGACGGAGCTGACGATCTCCATCTCCGAGACGAGCTCCTCCATCACCTTGTCTGAAGATCTCAGCACCTTCACTGCAACCTCCTTGCCATCATCGCAGCAACCCTTGTACACCTCGCTCGCCCCGCCTTTGCCGATTATCCGATCTGCGCCAATCCCAATCCGATCCAATAGATCATGAATTCATCACCATTCAGCTCAGTTCATCCCAAATTTTGATTTCTGAAGATGAATTTTCACATACATATACTAGTTTTTTTTGTTTACCTGGAGAGAAGTTGCAAGTCATTCTTGCAAGCTCGCTGTAGCTGAACATGGTGTACTTGGATGAGTACTTGTTTCTCAGCGAGGCAAGCTCTTGGGCAACCTGCTCCGCCGCTTCATCGGTCGCCGGAGATGGAATTTCCGATGCGGTGATGGCCGGTGAGGTTGCTTGGTCGCCGGAGTTGTTGCGTGGATTTAGCGGCGATGGCGCCGGGCACCGGCTCGGCAGCTGCATTGCCCACCGCGCCACCGACATCTCCGTCCACTCCGGCAAGGCGGACTTCAGGTCCGGCGAGAGGAGCGGCCAGCCGGCGGTCACCTCCGGCGACCTCGCCTGACGTGGCGTGAACGCTACTACCGGCGAGACGGGGGCGCTCCCCGGCGTCGAGATGTTCCGGCGAAGGTGCCGGCCGCCGCCGGCGATCGCCGCGTCGTCCTGGGATTTCTCGCGGGTGATCGTCGTCGCCGCTCTGACGAGCTTCCGGTAAATCCTCCTCGGCGTCTCCACCACTGCACCAGAAGCAGCATTCCAACATTTTTTTTTCACCCAAATTTGACCCAAACAAAAACAAATTGAAACAAAATTCATTGCAAATGGCACAAGTATTGAAGTATTCATGAACAAAATTCAGAGAGAAATTGTGTGGGCAATTCAGCGTACGTGGGCTGATGCACTGGTTGAGTTGCTGCTGCGCGGCGTCTCGCCGGTACACGACCCTGCCATTGCCGACGGCGAGGACCGAGCAGCTCGGAGGCACTCTCTTCGCGCAGTACTTCGCGACGGCGGCGGAGGACGACGACGACGGTGGCCGGAGATGGCTCCGGGAGTTGTTTGTGATGCCGAGGATGAGGTGCGCCGCGCCATAGGAGCTCGCCTCGTTCACGAGAGCCTTCTTGATGGACGATCCATGGCAGATTCTGAGCTCCAGGCTGATCTGAGAATGCGGCGAGGAAGAATTCGTCAAGCGATCGAGCGGAGAGATTCTCGGATCAAGATTCAGAGTACGTGTGGGCGATGAGCTGGAACCTGGTTGAGATCGCAGAAGTCATGGTACGCGCGGAGCAACGCGGCGAGCGATTCCGTGGCTCTGATCCTCCTCGCCGCCATTCTCATGGCGCCTTCTTGATCGGCGGCGGCCGCCGCGGCGGCGGGTGTGGCGACGTGGAGCGCGACGACGCGGTCTCCGGCTGAGGCGACCATGGCGAGCGCCCAGGTGAGCAGCTCCCTCCCCTCCGCGTCGTCCCGTACACCGACCACCACCACCGTCCTCCCTCCCCACCCCCGCGCCGGCAGCGCCAGCACCGGCGGCGGCGCGCGCCGCGACATCGGCGACCTGAGCTTCAT
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| CDS seq | ATGAAGCTCAGGTCGCCGATGTCGCGGCGCGCGCCGCCGCCGGTGCTGGCGCTGCCGGCGCGGGGGTGGGGAGGGAGGACGGTGGTGGTGGTCGGTGTACGGGACGACGCGGAGGGGAGGGAGCTGCTCACCTGGGCGCTCGCCATGGTCGCCTCAGCCGGAGACCGCGTCGTCGCGCTCCACGTCGCCACACCCGCCGCCGCGGCGGCCGCCGCCGATCAAGAAGGCGCCATGAGAATGGCGGCGAGGAGGATCAGAGCCACGGAATCGCTCGCCGCGTTGCTCCGCGCGTACCATGACTTCTGCGATCTCAACCAGATCAGCCTGGAGCTCAGAATCTGCCATGGATCGTCCATCAAGAAGGCTCTCGTGAACGAGGCGAGCTCCTATGGCGCGGCGCACCTCATCCTCGGCATCACAAACAACTCCCGGAGCCATCTCCGGCCACCGTCGTCGTCGTCCTCCGCCGCCGTCGCGAAGTACTGCGCGAAGAGAGTGCCTCCGAGCTGCTCGGTCCTCGCCGTCGGCAATGGCAGGGTCGTGTACCGGCGAGACGCCGCGCAGCAGCAACTCAACCAGTGCATCAGCCCACTGGTGGAGACGCCGAGGAGGATTTACCGGAAGCTCGTCAGAGCGGCGACGACGATCACCCGCGAGAAATCCCAGGACGACGCGGCGATCGCCGGCGGCGGCCGGCACCTTCGCCGGAACATCTCGACGCCGGGGAGCGCCCCCGTCTCGCCGGTAGTAGCGTTCACGCCACGTCAGGCGAGGTCGCCGGAGGTGACCGCCGGCTGGCCGCTCCTCTCGCCGGACCTGAAGTCCGCCTTGCCGGAGTGGACGGAGATGTCGGTGGCGCGGTGGGCAATGCAGCTGCCGAGCCGGTGCCCGGCGCCATCGCCGCTAAATCCACGCAACAACTCCGGCGACCAAGCAACCTCACCGGCCATCACCGCATCGGAAATTCCATCTCCGGCGACCGATGAAGCGGCGGAGCAGGTTGCCCAAGAGCTTGCCTCGCTGAGAAACAAGTACTCATCCAAGTACACCATGTTCAGCTACAGCGAGCTTGCAAGAATGACTTGCAACTTCTCTCCAGATCGGATAATCGGCAAAGGCGGGGCGAGCGAGGTGTACAAGGGTTGCTGCGATGATGGCAAGGAGGTTGCAGTGAAGGTGCTGAGATCTTCAGACAAGGTGATGGAGGAGCTCGTCTCGGAGATGGAGATCGTCAGCTCCGTCCGCCACGGCAACGCCATGCCGCTCGCCGGGTTCTGCCTCGACGACGGCGGCGGCGGCGCCAAGCTCATGCTGGTCTACGACTACATGGCGAGAGGCAGCCTCGAGGAGATCTTGCACGGTGAAAAGGAGGGAAAAGATCTGTTTGGTTGGCCGGAGAGGTTCAAGGTGGCCGCCGGAGTAGCACGAGCGCTCGTGTACCTCCACGGCGGCGACGGCGACGGCCGGCCGGTGATCCACAGGGACGTCAAGTCGTCCAACATCCTCGTCTCTGAAGATTTCCAACCAAAGCTGTGTGACTTCGGCCTCGCGCTCTGGGCGACGGAGGCGGCGTCTCCGGTCACCGGCGACGATGTCGCCGGCACATTCGGGTACTTGGCTCCAGAGTACTTCATGCACGGCAAGGTCAGCGACAAGATCGACGTGTACGCCTTCGGCGTCGTCCTCCTCGAGCTCGTCTCCGGGAGGAAGCTGGTGAGCTCGGGCGGCGGCAAGGGCAAGGAGAGCCTGGTCATGTGGGCGAACACCATCATACAAGGAGGAAAGCTCACTGACCTCGTCGACCCCAGCCTGCCGACGGACGGCAGCGGCGTCGCCGGCGAGGTCGAGAGGATGACCCTCGCCGCCGCCCTCTGCATCCGGCGATCGCCGCAACGCCGGCCTAGCATTGCAAATGTTCTGAAACTGCTCGACGGCGATGGCGACGCCGTCAGGTGGGCGAGGTCGCAGGCTGGTCTGTCCGCCGGCGACGACACTGACGATGGCGATGGCGCTTCGCCGGAGAAGAAGGACATCCAGTCGTACATCAACCTTGCGCTGCTCGACGTCGACGACGACTCGGCGTCCGTGAGCAGCGGCGGCGGCGACTTCACGGCGGCGAACGTGTCGCTGGAGGAGTACATGAAGGGGAGATGGAGTCGATCATCGAGCTTCGACTGA
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| Protein seq | MKLRSPMSRRAPPPVLALPARGWGGRTVVVVGVRDDAEGRELLTWALAMVASAGDRVVALHVATPAAAAAAADQEGAMRMAARRIRATESLAALLRAYHDFCDLNQISLELRICHGSSIKKALVNEASSYGAAHLILGITNNSRSHLRPPSSSSSAAVAKYCAKRVPPSCSVLAVGNGRVVYRRDAAQQQLNQCISPLVETPRRIYRKLVRAATTITREKSQDDAAIAGGGRHLRRNISTPGSAPVSPVVAFTPRQARSPEVTAGWPLLSPDLKSALPEWTEMSVARWAMQLPSRCPAPSPLNPRNNSGDQATSPAITASEIPSPATDEAAEQVAQELASLRNKYSSKYTMFSYSELARMTCNFSPDRIIGKGGASEVYKGCCDDGKEVAVKVLRSSDKVMEELVSEMEIVSSVRHGNAMPLAGFCLDDGGGGAKLMLVYDYMARGSLEEILHGEKEGKDLFGWPERFKVAAGVARALVYLHGGDGDGRPVIHRDVKSSNILVSEDFQPKLCDFGLALWATEAASPVTGDDVAGTFGYLAPEYFMHGKVSDKIDVYAFGVVLLELVSGRKLVSSGGGKGKESLVMWANTIIQGGKLTDLVDPSLPTDGSGVAGEVERMTLAAALCIRRSPQRRPSIANVLKLLDGDGDAVRWARSQAGLSAGDDTDDGDGASPEKKDIQSYINLALLDVDDDSASVSSGGGDFTAANVSLEEYMKGRWSRSSSFD |
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| Function | Receptor-like cytosolic serine/threonine-protein kinase RBK2 [UniProtKB/Swiss-Prot:Q8RXC8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_12g0005450 | OsIR64_12g0005450.01 | Chr12 | 4109858 | 4112780 | - | NAM | ||
| CDS seq | ATGAAGCTCAGGTCGCCGATGTCGCGGCGCGCGCCGCCGCCGGTGCTGGCGCTGCCGGCGCGGGGGTGGGGAGGGAGGACGGTGGTGGTGGTCGGTGTACGGGACGACGCGGAGGGGAGGGAGCTGCTCACCTGGGCGCTCGCCATGGTCGCCTCAGCCGGAGACCGCGTCGTCGCGCTCCACGTCGCCACACCCGCCGCCGCGGCGGCCGCCGCCGATCAAGAAGGCGCCATGAGAATGGCGGCGAGGAGGATCAGAGCCACGGAATCGCTCGCCGCGTTGCTCCGCGCGTACCATGACTTCTGCGATCTCAACCAGATCAGCCTGGAGCTCAGAATCTGCCATGGATCGTCCATCAAGAAGGCTCTCGTGAACGAGGCGAGCTCCTATGGCGCGGCGCACCTCATCCTCGGCATCACAAACAACTCCCGGAGCCATCTCCGGCCACCGTCGTCGTCGTCCTCCGCCGCCGTCGCGAAGTACTGCGCGAAGAGAGTGCCTCCGAGCTGCTCGGTCCTCGCCGTCGGCAATGGCAGGGTCGTGTACCGGCGAGACGCCGCGCAGCAGCAACTCAACCAGTGCATCAGCCCACTGGTGGAGACGCCGAGGAGGATTTACCGGAAGCTCGTCAGAGCGGCGACGACGATCACCCGCGAGAAATCCCAGGACGACGCGGCGATCGCCGGCGGCGGCCGGCACCTTCGCCGGAACATCTCGACGCCGGGGAGCGCCCCCGTCTCGCCGGTAGTAGCGTTCACGCCACGTCAGGCGAGGTCGCCGGAGGTGACCGCCGGCTGGCCGCTCCTCTCGCCGGACCTGAAGTCCGCCTTGCCGGAGTGGACGGAGATGTCGGTGGCGCGGTGGGCAATGCAGCTGCCGAGCCGGTGCCCGGCGCCATCGCCGCTAAATCCACGCAACAACTCCGGCGACCAAGCAACCTCACCGGCCATCACCGCATCGGAAATTCCATCTCCGGCGACCGATGAAGCGGCGGAGCAGGTTGCCCAAGAGCTTGCCTCGCTGAGAAACAAGTACTCATCCAAGTACACCATGTTCAGCTACAGCGAGCTTGCAAGAATGACTTGCAACTTCTCTCCAGATCGGATAATCGGCAAAGGCGGGGCGAGCGAGGTGTACAAGGGTTGCTGCGATGATGGCAAGGAGGTTGCAGTGAAGGTGCTGAGATCTTCAGACAAGGTGATGGAGGAGCTCGTCTCGGAGATGGAGATCGTCAGCTCCGTCCGCCACGGCAACGCCATGCCGCTCGCCGGGTTCTGCCTCGACGACGGCGGCGGCGGCGCCAAGCTCATGCTGGTCTACGACTACATGGCGAGAGGCAGCCTCGAGGAGATCTTGCACGGTGAAAAGGAGGGAAAAGATCTGTTTGGTTGGCCGGAGAGGTTCAAGGTGGCCGCCGGAGTAGCACGAGCGCTCGTGTACCTCCACGGCGGCGACGGCGACGGCCGGCCGGTGATCCACAGGGACGTCAAGTCGTCCAACATCCTCGTCTCTGAAGATTTCCAACCAAAGCTGTGTGACTTCGGCCTCGCGCTCTGGGCGACGGAGGCGGCGTCTCCGGTCACCGGCGACGATGTCGCCGGCACATTCGGGTACTTGGCTCCAGAGTACTTCATGCACGGCAAGGTCAGCGACAAGATCGACGTGTACGCCTTCGGCGTCGTCCTCCTCGAGCTCGTCTCCGGGAGGAAGCTGGTGAGCTCGGGCGGCGGCAAGGGCAAGGAGAGCCTGGTCATGTGGGCGAACACCATCATACAAGGAGGAAAGCTCACTGACCTCGTCGACCCCAGCCTGCCGACGGACGGCAGCGGCGTCGCCGGCGAGGTCGAGAGGATGACCCTCGCCGCCGCCCTCTGCATCCGGCGATCGCCGCAACGCCGGCCTAGCATTGCAAATGTTCTGAAACTGCTCGACGGCGATGGCGACGCCGTCAGGTGGGCGAGGTCGCAGGCTGGTCTGTCCGCCGGCGACGACACTGACGATGGCGATGGCGCTTCGCCGGAGAAGAAGGACATCCAGTCGTACATCAACCTTGCGCTGCTCGACGTCGACGACGACTCGGCGTCCGTGAGCAGCGGCGGCGGCGACTTCACGGCGGCGAACGTGTCGCTGGAGGAGTACATGAAGGGGAGATGGAGTCGATCATCGAGCTTCGACTGA
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| Protein seq | MKLRSPMSRRAPPPVLALPARGWGGRTVVVVGVRDDAEGRELLTWALAMVASAGDRVVALHVATPAAAAAAADQEGAMRMAARRIRATESLAALLRAYHDFCDLNQISLELRICHGSSIKKALVNEASSYGAAHLILGITNNSRSHLRPPSSSSSAAVAKYCAKRVPPSCSVLAVGNGRVVYRRDAAQQQLNQCISPLVETPRRIYRKLVRAATTITREKSQDDAAIAGGGRHLRRNISTPGSAPVSPVVAFTPRQARSPEVTAGWPLLSPDLKSALPEWTEMSVARWAMQLPSRCPAPSPLNPRNNSGDQATSPAITASEIPSPATDEAAEQVAQELASLRNKYSSKYTMFSYSELARMTCNFSPDRIIGKGGASEVYKGCCDDGKEVAVKVLRSSDKVMEELVSEMEIVSSVRHGNAMPLAGFCLDDGGGGAKLMLVYDYMARGSLEEILHGEKEGKDLFGWPERFKVAAGVARALVYLHGGDGDGRPVIHRDVKSSNILVSEDFQPKLCDFGLALWATEAASPVTGDDVAGTFGYLAPEYFMHGKVSDKIDVYAFGVVLLELVSGRKLVSSGGGKGKESLVMWANTIIQGGKLTDLVDPSLPTDGSGVAGEVERMTLAAALCIRRSPQRRPSIANVLKLLDGDGDAVRWARSQAGLSAGDDTDDGDGASPEKKDIQSYINLALLDVDDDSASVSSGGGDFTAANVSLEEYMKGRWSRSSSFD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.183353 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0180500 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g08050 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0180500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0005280 | RBH | 0.0 | 1.188463 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0005490 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0005530 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0005360 | RBH | 0.000000 | 0.077289 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0005480 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0067700 | RBH | 0.042762 | 0.7498245 | 0.19249 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006010 | RBH | 0.175177 | 1.926698 | 1.467103 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0071900 | RBH | 0.203807 | 0.7364665 | 0.1552305 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0005260 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0005540 | RBH | 0.077735 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0005480 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0005450 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0005480 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G005270 | RBH | 0.000000 | 0.406689 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0005460 | RBH | 0.000000 | 0.000000 | 0.000000 |
