Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0001840 | OGI:07004740 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:1552286-1562449 | ||||||||
| Gene Symbol | RLK, RLCK221, OsRLCK221, YK35 | ||||||||||
| DNA seq | tcatcttcctccagagatgttagatattgtgccgacgctagtccctggaggaggatatgatgatagtgtatatgggttgaacccttcatcttgcatcatggagatgatgctgaagctcatatccatttgtgttagctcagggagtggcacatcaccatcaaggtattgcatgacttgctgcatattgggcctcatgttggtaaatggatgtgagcataatagacctaactttagcacaaagcatgcttcatcaatgttgtagtcgccttgcagccttgcatctactgtatttgttagcaatcctttttgccaatgctcgagtacccaatcaactaatacagcaggactgtcttgtgaactgtggttaactggcctttgcccgcaggtgacctcaagaaggaatgcaccaaaggcaaacacatctgtgagaggggatgccttacctgtgcataccaattctggggcgaggtaccccattgtaccgaccacgtgtgtagtttgtaggtcagtgccatgatcatatagtcttgcaaggccaaagtcacctagccttccattcatttcggtatcgagcaacacattgcttgccttgatatcccggtggatgacaactttctcccacttgtcgtggagatagaacaatccagatgcaatacccttgatgatccaaaagcgttgatcccaactcaatgtaggtttgagctcattattgtataaatatgcatcaaggctaccatttggcatatagtcataaactaaaagtagttcaccttttctcctacaatagcccaataattgaacaatattgcgatgacgaatgcggccaatactgacaacctcagcaacaaactccttcatcccttgtctagactcatgagacactctcttcactgcgacctctagtttagatgatggaagtactcctttgtagaccttaccaaatcctcctgcaccaagcaagttcttattgtcgaatccatgtgtagcgtggaacagatccttgtatgaaaatcgatgtggtccaaactcaatctcccaatcttcttttagctctacatacctcaatcgcctccgcacaattgtaataaatacaccacaaaaaagaatcacaaatgttgcactggctattggtagagtgattgccaggagctttggttgagggtttgggccctgacgaggtagttttggtagtttgttgacattaatcataggagctggtttattcatgccaaagctccagccaaggatgtagtgtcgtgagtcaactaaaccggttgatgctgagaatccaatatacgatggctctttcagcactgttgagaggtcataggatatcaagatgagtggcctcttaggtttcgccattttaattggagccatagtcacactgattttcttgtcttctccattatagtccacccatgcttgcattgcatcaccactaataagactcatgttttgaaagctactatttctatcatcatagtagcctgcagagtgggattttattgagtggaggtcattgatgtcaatgcctacgtggttgtcatcgatgtcttcaaactcgatgttcaagatagtgtcaaactcaatagctaagatatggttgcttttgctgcctctgtttttagaatttagcaagcccaagtattggatagccaatgcattggagaaatttatgcttggggaaacaacaaaggccaatccatgtaggctcattctgggatagctagagcggatggcaaacacgaatgtaactgcgaaagaatgtactttattgttgtgtgacttgcggaagtgcaatggagatgggtagaatgcatggcctttgcgattaattgtgccattggttagctcaagtagtccgtttgacgtgactacagtagtatcatcagtgatgaggttggcaccagtgaacccaaggtataagagttgatcatcacttgtattggtgaaggatgcacagttgatgccaaaggaaacgagtaagaaaagaaagaaaaactttgtgtgagatgtttgcctaacctgaacaaaaagatcaaggaagatgcatgggtggagcacttcataagccatgttccttttgtggttttagataacacactgttgggaaatttatattaatttacagctagggcaagtcctgttgccttgctcttatttccacaagtgtctttgtctgaaagagttggtactttatattgagaaagtgatttttatgcgtattgattaaaatatgttctttccctaaaaagttagatgagtgataaatgtgaaatcaaccatcttatgtacggaatggttgtcacttgtcaaaagttttttcaaactttatatatactttaaaggactttactctcttgtaaagaaagtgaggttctaagttgcaaatattggaatataaaaaaataaagtattcatttttaatgatgaaaaaaatgtgtatgattggcttaattaatatctactatcagatacctccaattttttctatgtaaatattacctgccatgcaagaaacttgattgtgacacgagaaggtgaaaattttatagtatttattatactatgcattaggagaatcgtttgtgtcaaatcatgtgccagatttcttatgtgttcttgacataggttcccagttgcctgtgcaatcaatacttacctcttatttgttttgacgaagactctggtatatatgtgccttcctataatattgtttgtagtaatctaacaactatcttttaacttttaccaaaatgttgtgttttatggagattacctgtagtcaccgtaatcaagttacactcaatcagtttcatgatgacattgatgtttgcccctatgacaatcaagaaattcatatcaaaacattcatagaagaatttgttattcagataaataccttggaattaaacatcatttaaaaaaatatataatgatataaacacctcactaaaaacaccaaaacgtctctaggattcaaacatacagggacaagtttcagaaaatctaatggttattagctgataaccactctgtttcaaaattgactcctttttccaaatggttggagctgatattctgagcctgcatagatcatatatatctcacgagaaatatctgataaatttggtaaaaattactaatctctttaaaataaaagcgagactttgaatgcataatatatggctcaaattaataggctgcaaaatgggttgatcttgattttgtatcttgcttactctgccatttatgaaggtgaatgcacagatggattacacccttctttgtaaggcaatcagatacaaacaaatacgctgatccaccacgaaagacatggcaaacaatatccacaatgttcttctgcaaatggagaaaattcagacaaaaccatctaaaagatctttctctgaatatttacagtcttactattcaaaattcaaaataatatacaatacattgctattagctagtttgtttaccatatattatagatcttcgaccgaaacttcaacacatttatttctctaagttggactggtgttccttacgaaaaagaaaaacataatgcacatatgtactaattaaatatgaaagtatgcaaagccttggtaaaacacatactatggagatcaacttatgcaaccgaaacaggttggtttcattgtttagcttttttttttttttgccgggttggctaagaaaaggctgaccaaatttcattaaggtttgaggagagtgttacaaagttgatcatgaaattagactgtcgagttggggagaggatccccaaagaaatagagggaggaaaaaagaaaaaaatatttaaaagggctactcctctcatgattgaaatatgccagctgatctccaaattgaaatttcctctttgatatctgcagtaaggtgctccaccaccttgaaattttgatccaagactcttgcattgtgttccttccaaactagccaacacaccagcataaacacagatttggagaagaacactttcctgtagctcgtctgaaaacagcagtggacatactgccaccactctgccagctgcaagccttgctgccccagggggttgaaggccacgttaatctaatcccgcagcattgaccttgtttagctcttgcaattgcattgaggtaactaggcatcccacatctaattacaaccccattttatttatatatgacaggaaatcatatgctaatgtaaaacgaagactcgaaaatacagagatgaattaaatatcatagggagaccatgtatgagatctaacttctgagaggtcagatagtgtgctgtttgatattagaaactggtttgtcatggtctctggatcaaaaccttggttctgcatcaaggagagcatgttgaagctcatgtgtgttggtgttagctctggtagttccatctctctattgagaatctgcgtaacatgcctcatgctgggtcttttattgatgaaagggtgtgcacacagcagtcctaacttcagagctaggcacgcctcatcaatattgtagacaccttggagtttgatatccactgcatcatttagaaatccttggtgccaacaatgaagcacccaatctaccaacatcagttgattgtcttgtgcagtgtggtcaattggctttcgcccacaggtgacttcaagaacaaacatgccaaaggcaaatacatcggtaaggggagttgctttgctagttcgtgctagctcaggagctaggtatcctatggtaccaacaacatgtgtggtttgagggtcggttccatggtcatataaccttgctaggccaaaatcgcctagtcgtccattcatgttgtcatcgagaagtatattgcttggcttgatgtctcgatggagtattactttctcccattcctcatggagataaagcaatccagatgcaatatcttttattatttggaatctttgggcccatgtcaaagtagaattgttctcttgaccatacaaatgcttgtcaagacttccattggacatataatcatacactaaaataagttcactttttcgccggcagtagccatgtaactgcacaagattgcggtgttggaggtgacctatactgactatctcagcaacaaattccttcataccctggttggagtcatgagagatcctcttcacagcaatctccaatttagacgttggaagtagtcccttgtatacccttccaaaccctcctattcctagtagattcttgttcttaaatccttccgtagcacaaaacaaatccttatatgagaatctatgcggcccaaattcaacttcccaatcttctcgtatctcagcataccttaatctccttcggatgagtagaatgatgagagctatcattgcaagaacaaatgttgctgtggctattggcagagtgatttccaagaccttggaatgggttttctcaccttcataaggtagctttggcaacttactgatatcaatggctggtgcaggtttattgatgccaaaactccagccaagcacataatgccgcgcaacgaatgagcctgttgatgatgagaatccaacatatgccatgtctgtgagcactgttgagaggtcatagtaggtagagagtaatggcttaacaggcttggccatttttattggagctaaggtcacattgatctgtctgttgtccccattgtattctagccacacttgcatcatcttgtaactagtgagtgtaatgttgttgaagttaccattactgtctgtgtagtatcccacgctgctggagttcagtgatgtaagactgttgatgtcgattccaacatggttgttattgacatcgttgaactcatcattttggttcgtgtcgagctcgatagcgaagaaatggtttgttggatcgccgttgttgtggtcatttataaggccaaggtactggcttgccattgcggttgagaagtttttgctcacggaaacaacaaaagctatgccatggccgcagatgacaggccggagacagtagatggcaaatatgtaggagacagcaaaggaattcactgttccattgggtttcttcttgaaactgaatggagttgggtgaaaggcatggccttggagccgtaaggttccgttggtcaacttaagcaggccatctggtgttaccgaggccacgccgtcgagggtgaggttagcaccattgaagccagagtatatgaattggtcttcaccggtggcgagagctgaaagattagagatgaagaggaagaagaactgtagaagataggataaatgattcatggcagcatgagcttcagtgacccaatgaaaatgcaagaaaagcttcactagtactgaatcttgctctccatttggcactttatattttgcatttgcctaggccgtaggtatggcttggttttatgggagtcgtctactatctgctttttcccataggtgttatgatctgggacaagtaattaggtatactgaaaacgaaatttgtttggacagggtctcctaaaggatcctctgaagtctgaacaagaataattttctacaggttgcagagcgtccaaaattaatagagtactaataatttcaggggaaattcaggttattgcctttaatgtttcctgtcactcacattttttttaaccattctcgaactggattttctgaataaattgtactgcatgattgctcttatttttcaagtttgttttcattcaatgatgtattgctccctcagtagttaattgccttataaaagaaaaaaataaagaacctgttgcaaaaggaacactttctactacttaaaattagctgcctctctccttttcatctctgcatctttttcagaccagtctaggcacttgcatcaggggggctccttgaaactgttattaattttgagccatttgattgagaaaggctggtatcgtaagcaaagggctgaactcaaaataggagaattttcccattcatttattaaaagaagggcaaataatgaacagcaataaaagttttattattaatgctgttgtggacggcttcttcgacctcaggcctaccaaataagaacatgattaatgaaatgctatgttgagtgtatgaacaaatatttcttagttatgactgttgaagcttgcctaggattcaaggaacctgatgtgtaggctagttatcacaagtgttgtctgtgctaccaaattaaattgtgacagcatctttgacagggatattgacctcttaaacaatctgtagtaacatcatcatgctcatatagtcttgactgaattgacccaagtttaattacccaaggcagagggatctaaggatcgaagttaattgagtctgtttgcccattgcgtctgcaatgggttttcatttggtcccaaagactgatgactttcaattaaatctttggttttttttctattaattacatgtaaccgcatgtatagtctttttttttaaaaaaaaaaaacttgcatgtctagttatgaatctttagagaagcactttttaaattttgtatgtttaaatttgacaagtttaagctaggctaaaactatgtctatattcagtttttttaccaatatatcaatattcagttatgtagaaatatcttcaggatgtcaatattctgaattacacagacatggttttagatgtaatatccaggaagtgaagagctgaattcacctacaagctgggagttctttgatatgccaaagtgatatctgaatcagcaggcatcagggatgcagtattgtgctgcattcatgcccactgaaacccattagctctccagattgatgattttcagagttcagagtgctgaaaatatacactttgattttttaccccagtggagcaggcagagagagcaacaatattatcataatctagagagagagagagagagagagagagtagggacgttacagtagtatatatttagttgaaaatatgaatcacagcattatatatctgattaatatctcatatatctgcatctgcagtgcacataaggatataagatttgcagtttacctagtagtacttgaacttgaaatatatacaagtaggaactacttacaagatctaacagcagaacccttgcataagaggtaaatgtgttgaaaaaagagaactgataaaaaaaacagagaattggtgaatgtaatatgtgttgtttgcatggcccttggagactccaactatatatgctatcttccacttgagatgctagatgttatgtcactgctgcttgctatggaaggcaatgatgtatattgctcgaaaccttcgttctgcattacagccaacatgctgtaactcaagtttgttggcatcaactctgggagtggtttgtcaccgtcaaggtattgcatgacttgccgcatactgggccttgatttgcaaaatggatgtgcacacagtaaacccagctttaacacaagacatacctcatctgcatcatagtcaccaagtaaccgcttgtctagcatgtttgtgagtgatcctttgtgccaatgctcaacaacacaatcaattaacatttgtgaattgtcatctgcataattgtcaataggtctttgcccacatgttacctcaaggataaaaatgccaaaagcatacacatctgttagaggtgttgccttaccggtacgtgcgagctctggagctaggtatcccatagtaccgactacatgcgttgtttgcgggtctgctccatggtcatataactttgcaaggccaaaatcacctaggcgaccgttcatttcaccatcaaggagcacattacttgctttaacatcacggtggatgacaattttttcccacctatcatgaaggtaaaacaagccagatgcaacacctttgatgatttgaaacctctgagcccaatcaagcgtaggtttgctatcttcgcagtacaagtacttatcaagactaccattcggcatatattcatataccaataatagttcaccttttctcctgcaataaccaagtaactgcacgagattgcgatgtcgaaggcggccgatactaacaatctcagcgataaactccttcattccttgctttgaatcatgggacacccttttcacagcaacatgcaacttagaagttggaagcacacctttatacaccttcccaaatcctcctagaccaagtagattcctattcttaaatccgtctgtagcatgaaacagatccttatatgagaagcggtgtggcccaaactcagcctcccaatcttcatgtagctcagcgtacctcattcgcctccgtaccaaaagaacaatggtggttcccactatgagaatgaatgttgctgtggcaattggtagaatgatctctagtagtttagtccgtggttttgggctaacacgaggtagttttggtaatttggataagtcaatggctggggcaggacggtttatacccaagctcaatccgagcacacaatataatgtgttgattggaccagttgaagctgagaagccgatataggatggttcttctagcacaagtgagaggttatgaatttctgacaacagtggcctcaatggtttgcctacctcaatgggagccatggtcaccttgatctgtgtggtgtctttgttgtagtcaacccatacttgcattggcttgtagctacagagggacaaattgttgaagatactcttgttatcactatagaaaccagctggccgagattgaactgaggtgagattgttgatgtcgatgccaacgtggttgtcgtcgatgtcgtggaactcggtattttggctactatcaagctcgactgcaaaaatgtggttgcttgcttttccatctgatgttttgttgagtagacccaagtattgggagtcctgagcacttgacatatcactggttggagagatcacgaaagtcatgccatcggtacatttttcattagagtagacaggaatcatgccaaacacaaagttaattgagaaggattgcaccgtcccgttgggcgtcttcctgaattgccatggagttgggtagaacgcatggcctttgatgtggacggtgcgattggtcagctcaagaaccccatcatctgtaactgttgctgcaccatcaagggtgaggtttctgccggagaagcccgaatagacgaactggtcctcgctcat
More
|
||||||||||
| CDS seq | atgagcgaggaccagttcgtctattcgggcttctccggcagaaacctcacccttgatggtgcagcaacagttacagatgatggggttcttgagctgaccaatcgcaccgtccacatcaaaggccatgcgttctacccaactccatggcaattcaggaagacgcccaacgggacggtgcaatccttctcaattaactttgtgtttggcatgattcctgtctactctaatgaaaaatgtaccgatggcatgactttcgtgatctctccaaccagtgatatgtcaagtgctcaggactcccaatacttgggtctactcaacaaaacatcagatggaaaagcaagcaaccacatttttgcagtcgagcttgatagtagccaaaataccgagttccacgacatcgacgacaaccacgttggcatcgacatcaacaatctcacctcagttcaatctcggccagctggtttctatagtgataacaagagtatcttcaacaatttgtccctctgtagctacaagccaatgcaagtatgggttgactacaacaaagacaccacacagatcaaggtgaccatggctcccattgaggtaggcaaaccattgaggccactgttgtcagaaattcataacctctcacttgtgctagaagaaccatcctatatcggcttctcagcttcaactggtccaatcaacacattatattgtgtgctcggattgagcttgggtataaaccgtcctgccccagccattgacttatccaaattaccaaaactacctcgtgttagcccaaaaccacggactaaactactagagatcattctaccaattgccacagcaacattcattctcatagtgggaaccaccattgttcttttggtacggaggcgaatgaggtacgctgagctacatgaagattgggaggctgagtttgggccacaccgcttctcatataaggatctgtttcatgctacagacggatttaagaataggaatctacttggtctaggaggatttgggaaggtgtataaaggtgtgcttccaacttctaagttgcatgttgctgtgaaaagggtgtcccatgattcaaagcaaggaatgaaggagtttatcgctgagattgttagtatcggccgccttcgacatcgcaatctcgtgcagttacttggttattgcaggagaaaaggtgaactattattggtatatgaatatatgccgaatggtagtcttgataagtacttgtactgcgaagatagcaaacctacgcttgattgggctcagaggtttcaaatcatcaaaggtgttgcatctggcttgttttaccttcatgataggtgggaaaaaattgtcatccaccgtgatgttaaagcaagtaatgtgctccttgatggtgaaatgaacggtcgcctaggtgattttggccttgcaaagttatatgaccatggagcagacccgcaaacaacgcatgtagtcggtactatgggatacctagctccagagctcgcacgtaccgatgacaattcacaaatgttaattgattgtgttgttgagcattggcacaaaggatcactcacaaacatgctagacaagcggttacttggtgactatgatgcagatgagttcttcttcctcttcatctctaatctttcagctctcgccaccggtgaagaccaattcatatactctggcttcaatggtgctaacctcaccctcgacggcgtggcctcggtaacaccagatggcctgcttaagttgaccaacggaaccttacggctccaaggccatgcctttcacccaactccattcagtttcaagaagaaacccaatggaacagtgaattcctttgctgtctcctacatatttgccatctactgtctccggcctgtcatctgcggccatggcatagcttttgttgtttccgtgagcaaaaacttctcaaccgcaatggcaagccagtaccttggccttataaatgaccacaacaacggcgatccaacaaaccatttcttcgctatcgagctcgacacgaaccaaaatgatgagttcaacgatgtcaataacaaccatgttggaatcgacatcaacagtcttacatcactgaactccagcagcgtgggatactacacagacagtaatggtaacttcaacaacattacactcactagttacaagatgatgcaagtgtggctagaatacaatggggacaacagacagatcaatgtgaccttagctccaataaaaatggccaagcctgttaagccattactctctacctactatgacctctcaacagtgctcacagacatggcatatgttggattctcatcatcaacaggctcattcgttgcgcggcattatgtgcttggctggagttttggcatcaataaacctgcaccagccattgatatcagtaagttgccaaagctaccttatgaaggtgagaaaacccattccaaggtcttggaaatcactctgccaatagccacagcaacatttgttcttgcaatgatagctctcatcattctactcatccgaaggagattaaggtatgctgagatacgagaagattgggaagttgaatttgggccgcatagattctcatataaggatttgttttgtgctacggaaggatttaagaacaagaatctactaggaataggagggtttggaagggtatacaagggactacttccaacgtctaaattggagattgctgtgaagaggatctctcatgactccaaccagggtatgaaggaatttgttgctgagatagtcagtataggtcacctccaacaccgcaatcttgtgcagttacatggctactgccggcgaaaaagtgaacttattttagtgtatgattatatgtccaatggaagtcttgacaagcatttgtatggtcaagagaacaattctactttgacatgggcccaaagattccaaataataaaagatattgcatctggattgctttatctccatgaggaatgggagaaagtaatactccatcgagacatcaagccaagcaatatacttctcgatgacaacatgaatggacgactaggcgattttggcctagcaaggttatatgaccatggaaccgaccctcaaaccacacatgttgttggtaccataggatacctagctcctgagctagcacgaactagcaaagcaactccccttaccgatgtatttgcctttggcatgtttgttcttgaagtcacctgtgggcgaaagccaattgaccacactgcacaagacaatcaactgatgttggtagattgggtgcttcattgttggcaccaaggatttctaaatgatgcagtggatatcaaactccaaggtgtctacaatattgatgaggcgtgcctagctctgaagttaggactgctgtgtgcacaccctttcatcaataaaagacccagcatgaggcatgttacgcagattctcaatagagagatggaactaccagagctaacaccaacacacatgagcttcaacatgctctccttgatgcagaaccaaggggcaaacatcaatgtcatcatgaaactgattgagtgtaacttgattacggtgactacagttacattcgtgtttgccatccgctctagctatcccagaatgagcctacatggattggcctttgttgtttccccaagcataaatttctccaatgcattggctatccaatacttgggcttgctaaattctaaaaacagaggcagcaaaagcaaccatatcttagctattgagtttgacactatcttgaacatcgagtttgaagacatcgatgacaaccacgtaggcattgacatcaatgacctccactcaataaaatcccactctgcaggctactatgatgatagaaatagtagctttcaaaacatgagtcttattagtggtgatgcaatgcaagcatgggtggactataatggagaagacaagaaaatcagtgtgactatggctccaattaaaatggcgaaacctaagaggccactcatcttgatatcctatgacctctcaacagtgctgaaagagccatcgtatattggattctcagcatcaaccggtttagttgactcacgacactacatccttggctggagctttggcatgaataaaccagctcctatgattaatgtcaacaaactaccaaaactacctcgtcagggcccaaaccctcaaccaaagctcctggcaatcactctaccaatagccagtgcaacatttgtgattcttttttgtggtgtatttattacaattgtgcggaggcgattgaggtatgtagagctaaaagaagattgggagattgagtttggaccacatcgattttcatacaaggatctgttccacgctacacatggattcgacaataagaacttgcttggtgcaggaggatttggtaaggtctacaaaggagtacttccatcatctaaactagaggtcgcagtgaagagagtgtctcatgagtctagacaagggatgaaggagtttgttgctgaggttgtcagtattggccgcattcgtcatcgcaatattgttcaattattgggctattgtaggagaaaaggtgaactacttttagtttatgactatatgccaaatggtagccttgatgcatatttatacaataatgagctcaaacctacattgagttgggatcaacgcttttggatcatcaagggtattgcatctggattgttctatctccacgacaagtgggagaaagttgtcatccaccgggatatcaaggcaagcaatgtgttgctcgataccgaaatgaatggaaggctaggtgactttggccttgcaagactatatgatcatggcactgacctacaaactacacacgtggtcggtacaatggggtacctcgccccagaattggtatgcacaggtaaggcatcccctctcacagatgtgtttgcctttggtgcattccttcttgaggtcacctgcgggcaaaggccagttaaccacagttcacaagacagtcctgctgtattagttgattgggtactcgagcattggcaaaaaggattgctaacaaatacagtagatgcaaggctgcaaggcgactacaacattgatgaagcatgctttgtgctaaagttaggtctattatgctcacatccatttaccaacatgaggcccaatatgcagcaagtcatgcaataccttgatggtgatgtgccactccctgagctaacacaaatggatatgagcttcagcatcatctccatgatgcaagatgaagggttcaacccatatacactatcatcatatcctcctccagggactagcgtcggcacaatatctaacatctctggaggaagatga
More
|
||||||||||
| Protein seq | MSEDQFVYSGFSGRNLTLDGAATVTDDGVLELTNRTVHIKGHAFYPTPWQFRKTPNGTVQSFSINFVFGMIPVYSNEKCTDGMTFVISPTSDMSSAQDSQYLGLLNKTSDGKASNHIFAVELDSSQNTEFHDIDDNHVGIDINNLTSVQSRPAGFYSDNKSIFNNLSLCSYKPMQVWVDYNKDTTQIKVTMAPIEVGKPLRPLLSEIHNLSLVLEEPSYIGFSASTGPINTLYCVLGLSLGINRPAPAIDLSKLPKLPRVSPKPRTKLLEIILPIATATFILIVGTTIVLLVRRRMRYAELHEDWEAEFGPHRFSYKDLFHATDGFKNRNLLGLGGFGKVYKGVLPTSKLHVAVKRVSHDSKQGMKEFIAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYEYMPNGSLDKYLYCEDSKPTLDWAQRFQIIKGVASGLFYLHDRWEKIVIHRDVKASNVLLDGEMNGRLGDFGLAKLYDHGADPQTTHVVGTMGYLAPELARTDDNSQMLIDCVVEHWHKGSLTNMLDKRLLGDYDADEFFFLFISNLSALATGEDQFIYSGFNGANLTLDGVASVTPDGLLKLTNGTLRLQGHAFHPTPFSFKKKPNGTVNSFAVSYIFAIYCLRPVICGHGIAFVVSVSKNFSTAMASQYLGLINDHNNGDPTNHFFAIELDTNQNDEFNDVNNNHVGIDINSLTSLNSSSVGYYTDSNGNFNNITLTSYKMMQVWLEYNGDNRQINVTLAPIKMAKPVKPLLSTYYDLSTVLTDMAYVGFSSSTGSFVARHYVLGWSFGINKPAPAIDISKLPKLPYEGEKTHSKVLEITLPIATATFVLAMIALIILLIRRRLRYAEIREDWEVEFGPHRFSYKDLFCATEGFKNKNLLGIGGFGRVYKGLLPTSKLEIAVKRISHDSNQGMKEFVAEIVSIGHLQHRNLVQLHGYCRRKSELILVYDYMSNGSLDKHLYGQENNSTLTWAQRFQIIKDIASGLLYLHEEWEKVILHRDIKPSNILLDDNMNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELARTSKATPLTDVFAFGMFVLEVTCGRKPIDHTAQDNQLMLVDWVLHCWHQGFLNDAVDIKLQGVYNIDEACLALKLGLLCAHPFINKRPSMRHVTQILNREMELPELTPTHMSFNMLSLMQNQGANINVIMKLIECNLITVTTVTFVFAIRSSYPRMSLHGLAFVVSPSINFSNALAIQYLGLLNSKNRGSKSNHILAIEFDTILNIEFEDIDDNHVGIDINDLHSIKSHSAGYYDDRNSSFQNMSLISGDAMQAWVDYNGEDKKISVTMAPIKMAKPKRPLILISYDLSTVLKEPSYIGFSASTGLVDSRHYILGWSFGMNKPAPMINVNKLPKLPRQGPNPQPKLLAITLPIASATFVILFCGVFITIVRRRLRYVELKEDWEIEFGPHRFSYKDLFHATHGFDNKNLLGAGGFGKVYKGVLPSSKLEVAVKRVSHESRQGMKEFVAEVVSIGRIRHRNIVQLLGYCRRKGELLLVYDYMPNGSLDAYLYNNELKPTLSWDQRFWIIKGIASGLFYLHDKWEKVVIHRDIKASNVLLDTEMNGRLGDFGLARLYDHGTDLQTTHVVGTMGYLAPELVCTGKASPLTDVFAFGAFLLEVTCGQRPVNHSSQDSPAVLVDWVLEHWQKGLLTNTVDARLQGDYNIDEACFVLKLGLLCSHPFTNMRPNMQQVMQYLDGDVPLPELTQMDMSFSIISMMQDEGFNPYTLSSYPPPGTSVGTISNISGGR |
||||||||||
| Function | L-type lectin-domain containing receptor kinase SIT2 [UniProtKB/Swiss-Prot:Q7XUN6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0001840 | OsLima_07g0001840.01 | Chr07 | 1552286 | 1562449 | - | NAM | ||
| CDS seq | atgagcgaggaccagttcgtctattcgggcttctccggcagaaacctcacccttgatggtgcagcaacagttacagatgatggggttcttgagctgaccaatcgcaccgtccacatcaaaggccatgcgttctacccaactccatggcaattcaggaagacgcccaacgggacggtgcaatccttctcaattaactttgtgtttggcatgattcctgtctactctaatgaaaaatgtaccgatggcatgactttcgtgatctctccaaccagtgatatgtcaagtgctcaggactcccaatacttgggtctactcaacaaaacatcagatggaaaagcaagcaaccacatttttgcagtcgagcttgatagtagccaaaataccgagttccacgacatcgacgacaaccacgttggcatcgacatcaacaatctcacctcagttcaatctcggccagctggtttctatagtgataacaagagtatcttcaacaatttgtccctctgtagctacaagccaatgcaagtatgggttgactacaacaaagacaccacacagatcaaggtgaccatggctcccattgaggtaggcaaaccattgaggccactgttgtcagaaattcataacctctcacttgtgctagaagaaccatcctatatcggcttctcagcttcaactggtccaatcaacacattatattgtgtgctcggattgagcttgggtataaaccgtcctgccccagccattgacttatccaaattaccaaaactacctcgtgttagcccaaaaccacggactaaactactagagatcattctaccaattgccacagcaacattcattctcatagtgggaaccaccattgttcttttggtacggaggcgaatgaggtacgctgagctacatgaagattgggaggctgagtttgggccacaccgcttctcatataaggatctgtttcatgctacagacggatttaagaataggaatctacttggtctaggaggatttgggaaggtgtataaaggtgtgcttccaacttctaagttgcatgttgctgtgaaaagggtgtcccatgattcaaagcaaggaatgaaggagtttatcgctgagattgttagtatcggccgccttcgacatcgcaatctcgtgcagttacttggttattgcaggagaaaaggtgaactattattggtatatgaatatatgccgaatggtagtcttgataagtacttgtactgcgaagatagcaaacctacgcttgattgggctcagaggtttcaaatcatcaaaggtgttgcatctggcttgttttaccttcatgataggtgggaaaaaattgtcatccaccgtgatgttaaagcaagtaatgtgctccttgatggtgaaatgaacggtcgcctaggtgattttggccttgcaaagttatatgaccatggagcagacccgcaaacaacgcatgtagtcggtactatgggatacctagctccagagctcgcacgtaccgatgacaattcacaaatgttaattgattgtgttgttgagcattggcacaaaggatcactcacaaacatgctagacaagcggttacttggtgactatgatgcagatgagttcttcttcctcttcatctctaatctttcagctctcgccaccggtgaagaccaattcatatactctggcttcaatggtgctaacctcaccctcgacggcgtggcctcggtaacaccagatggcctgcttaagttgaccaacggaaccttacggctccaaggccatgcctttcacccaactccattcagtttcaagaagaaacccaatggaacagtgaattcctttgctgtctcctacatatttgccatctactgtctccggcctgtcatctgcggccatggcatagcttttgttgtttccgtgagcaaaaacttctcaaccgcaatggcaagccagtaccttggccttataaatgaccacaacaacggcgatccaacaaaccatttcttcgctatcgagctcgacacgaaccaaaatgatgagttcaacgatgtcaataacaaccatgttggaatcgacatcaacagtcttacatcactgaactccagcagcgtgggatactacacagacagtaatggtaacttcaacaacattacactcactagttacaagatgatgcaagtgtggctagaatacaatggggacaacagacagatcaatgtgaccttagctccaataaaaatggccaagcctgttaagccattactctctacctactatgacctctcaacagtgctcacagacatggcatatgttggattctcatcatcaacaggctcattcgttgcgcggcattatgtgcttggctggagttttggcatcaataaacctgcaccagccattgatatcagtaagttgccaaagctaccttatgaaggtgagaaaacccattccaaggtcttggaaatcactctgccaatagccacagcaacatttgttcttgcaatgatagctctcatcattctactcatccgaaggagattaaggtatgctgagatacgagaagattgggaagttgaatttgggccgcatagattctcatataaggatttgttttgtgctacggaaggatttaagaacaagaatctactaggaataggagggtttggaagggtatacaagggactacttccaacgtctaaattggagattgctgtgaagaggatctctcatgactccaaccagggtatgaaggaatttgttgctgagatagtcagtataggtcacctccaacaccgcaatcttgtgcagttacatggctactgccggcgaaaaagtgaacttattttagtgtatgattatatgtccaatggaagtcttgacaagcatttgtatggtcaagagaacaattctactttgacatgggcccaaagattccaaataataaaagatattgcatctggattgctttatctccatgaggaatgggagaaagtaatactccatcgagacatcaagccaagcaatatacttctcgatgacaacatgaatggacgactaggcgattttggcctagcaaggttatatgaccatggaaccgaccctcaaaccacacatgttgttggtaccataggatacctagctcctgagctagcacgaactagcaaagcaactccccttaccgatgtatttgcctttggcatgtttgttcttgaagtcacctgtgggcgaaagccaattgaccacactgcacaagacaatcaactgatgttggtagattgggtgcttcattgttggcaccaaggatttctaaatgatgcagtggatatcaaactccaaggtgtctacaatattgatgaggcgtgcctagctctgaagttaggactgctgtgtgcacaccctttcatcaataaaagacccagcatgaggcatgttacgcagattctcaatagagagatggaactaccagagctaacaccaacacacatgagcttcaacatgctctccttgatgcagaaccaaggggcaaacatcaatgtcatcatgaaactgattgagtgtaacttgattacggtgactacagttacattcgtgtttgccatccgctctagctatcccagaatgagcctacatggattggcctttgttgtttccccaagcataaatttctccaatgcattggctatccaatacttgggcttgctaaattctaaaaacagaggcagcaaaagcaaccatatcttagctattgagtttgacactatcttgaacatcgagtttgaagacatcgatgacaaccacgtaggcattgacatcaatgacctccactcaataaaatcccactctgcaggctactatgatgatagaaatagtagctttcaaaacatgagtcttattagtggtgatgcaatgcaagcatgggtggactataatggagaagacaagaaaatcagtgtgactatggctccaattaaaatggcgaaacctaagaggccactcatcttgatatcctatgacctctcaacagtgctgaaagagccatcgtatattggattctcagcatcaaccggtttagttgactcacgacactacatccttggctggagctttggcatgaataaaccagctcctatgattaatgtcaacaaactaccaaaactacctcgtcagggcccaaaccctcaaccaaagctcctggcaatcactctaccaatagccagtgcaacatttgtgattcttttttgtggtgtatttattacaattgtgcggaggcgattgaggtatgtagagctaaaagaagattgggagattgagtttggaccacatcgattttcatacaaggatctgttccacgctacacatggattcgacaataagaacttgcttggtgcaggaggatttggtaaggtctacaaaggagtacttccatcatctaaactagaggtcgcagtgaagagagtgtctcatgagtctagacaagggatgaaggagtttgttgctgaggttgtcagtattggccgcattcgtcatcgcaatattgttcaattattgggctattgtaggagaaaaggtgaactacttttagtttatgactatatgccaaatggtagccttgatgcatatttatacaataatgagctcaaacctacattgagttgggatcaacgcttttggatcatcaagggtattgcatctggattgttctatctccacgacaagtgggagaaagttgtcatccaccgggatatcaaggcaagcaatgtgttgctcgataccgaaatgaatggaaggctaggtgactttggccttgcaagactatatgatcatggcactgacctacaaactacacacgtggtcggtacaatggggtacctcgccccagaattggtatgcacaggtaaggcatcccctctcacagatgtgtttgcctttggtgcattccttcttgaggtcacctgcgggcaaaggccagttaaccacagttcacaagacagtcctgctgtattagttgattgggtactcgagcattggcaaaaaggattgctaacaaatacagtagatgcaaggctgcaaggcgactacaacattgatgaagcatgctttgtgctaaagttaggtctattatgctcacatccatttaccaacatgaggcccaatatgcagcaagtcatgcaataccttgatggtgatgtgccactccctgagctaacacaaatggatatgagcttcagcatcatctccatgatgcaagatgaagggttcaacccatatacactatcatcatatcctcctccagggactagcgtcggcacaatatctaacatctctggaggaagatga
More
|
|||||||
| Protein seq | MSEDQFVYSGFSGRNLTLDGAATVTDDGVLELTNRTVHIKGHAFYPTPWQFRKTPNGTVQSFSINFVFGMIPVYSNEKCTDGMTFVISPTSDMSSAQDSQYLGLLNKTSDGKASNHIFAVELDSSQNTEFHDIDDNHVGIDINNLTSVQSRPAGFYSDNKSIFNNLSLCSYKPMQVWVDYNKDTTQIKVTMAPIEVGKPLRPLLSEIHNLSLVLEEPSYIGFSASTGPINTLYCVLGLSLGINRPAPAIDLSKLPKLPRVSPKPRTKLLEIILPIATATFILIVGTTIVLLVRRRMRYAELHEDWEAEFGPHRFSYKDLFHATDGFKNRNLLGLGGFGKVYKGVLPTSKLHVAVKRVSHDSKQGMKEFIAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYEYMPNGSLDKYLYCEDSKPTLDWAQRFQIIKGVASGLFYLHDRWEKIVIHRDVKASNVLLDGEMNGRLGDFGLAKLYDHGADPQTTHVVGTMGYLAPELARTDDNSQMLIDCVVEHWHKGSLTNMLDKRLLGDYDADEFFFLFISNLSALATGEDQFIYSGFNGANLTLDGVASVTPDGLLKLTNGTLRLQGHAFHPTPFSFKKKPNGTVNSFAVSYIFAIYCLRPVICGHGIAFVVSVSKNFSTAMASQYLGLINDHNNGDPTNHFFAIELDTNQNDEFNDVNNNHVGIDINSLTSLNSSSVGYYTDSNGNFNNITLTSYKMMQVWLEYNGDNRQINVTLAPIKMAKPVKPLLSTYYDLSTVLTDMAYVGFSSSTGSFVARHYVLGWSFGINKPAPAIDISKLPKLPYEGEKTHSKVLEITLPIATATFVLAMIALIILLIRRRLRYAEIREDWEVEFGPHRFSYKDLFCATEGFKNKNLLGIGGFGRVYKGLLPTSKLEIAVKRISHDSNQGMKEFVAEIVSIGHLQHRNLVQLHGYCRRKSELILVYDYMSNGSLDKHLYGQENNSTLTWAQRFQIIKDIASGLLYLHEEWEKVILHRDIKPSNILLDDNMNGRLGDFGLARLYDHGTDPQTTHVVGTIGYLAPELARTSKATPLTDVFAFGMFVLEVTCGRKPIDHTAQDNQLMLVDWVLHCWHQGFLNDAVDIKLQGVYNIDEACLALKLGLLCAHPFINKRPSMRHVTQILNREMELPELTPTHMSFNMLSLMQNQGANINVIMKLIECNLITVTTVTFVFAIRSSYPRMSLHGLAFVVSPSINFSNALAIQYLGLLNSKNRGSKSNHILAIEFDTILNIEFEDIDDNHVGIDINDLHSIKSHSAGYYDDRNSSFQNMSLISGDAMQAWVDYNGEDKKISVTMAPIKMAKPKRPLILISYDLSTVLKEPSYIGFSASTGLVDSRHYILGWSFGMNKPAPMINVNKLPKLPRQGPNPQPKLLAITLPIASATFVILFCGVFITIVRRRLRYVELKEDWEIEFGPHRFSYKDLFHATHGFDNKNLLGAGGFGKVYKGVLPSSKLEVAVKRVSHESRQGMKEFVAEVVSIGRIRHRNIVQLLGYCRRKGELLLVYDYMPNGSLDAYLYNNELKPTLSWDQRFWIIKGIASGLFYLHDKWEKVVIHRDIKASNVLLDTEMNGRLGDFGLARLYDHGTDLQTTHVVGTMGYLAPELVCTGKASPLTDVFAFGAFLLEVTCGQRPVNHSSQDSPAVLVDWVLEHWQKGLLTNTVDARLQGDYNIDEACFVLKLGLLCSHPFTNMRPNMQQVMQYLDGDVPLPELTQMDMSFSIISMMQDEGFNPYTLSSYPPPGTSVGTISNISGGR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.053163 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0130100 | RBH | 0.620625 | 0.630843 | 0.718654 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g04010 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0283125 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0001980 | SBH | 0.084849 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0010470 | RBH | 0.116940 | 0.0 | 2.600052 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0001880 | RBH | 0.280276 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0009350 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0001920 | RBH | 0.396331 | 0.0 | 0.252515 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0027500 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0001860 | RBH | 0.383437 | 0.079820 | 0.301511 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0025500 | RBH | 0 | 0.015256 | 0.3828775 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0036160 | RBH | 0.229543 | 0.059739 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0001860 | RBH | 0.094928 | 0.222106 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0001830 | SBH | 0.200830 | 0.857629 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0001940 | RBH | 0.689459 | 0.049129 | 0.446399 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0010410 | RBH | 0.053106 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G009550 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0009510 | RBH | 0.0 | 0.0 | 0.0 |
