Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0007270 | OGI:04046380 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:14536195-14540627 | ||||||||
| Gene Symbol | WAK32, OsWAK32, WAK41, OsWAK41 | ||||||||||
| DNA seq | atgagcctcttcttgggtggactacttccgctgctcctacttgtgtttactaccttggcccctattgcgcaagcttctgaaggcattgctagccttccatcagctgccacacttgcgggttgccaaagaagctgcggtaatctgaccttcgactacccctttggcattggatcatcccattgcttcaggcaacctgacttcgagctcatctgcgacaacaCcacgcaacccccaaggctgttattcaggaatggcaccactgaaatcgtccaaacccctgatagtggtaagatacacaccattacttctattaaagctttatttaattttagatgttgaaactgcatagcctcttttctgaaagtaaaaaaaaaaaatgtacaacgaaatgtatagtccaatagagatagtctcctcaccaggtgatcattatgactctactactggagtagtatactcgtcaatttttattatcatttctttgtctccagggtatctcaacgctgtttttcccaatcttggcatctccatgaaacccaatgtcagtgtgtacaacatgtcattggaacctcctgggaaatctttcctccttgcatatgctgaactaaacatcacaggctgcgacttggatatataccagctggtgctcaacgaaaacgaatatgtgcccgcgaagctttgttccgttacatgcccgaacgaaagaataacagaggctgttgctaggcaggactgcaatggcaccggatgttgcacctttggtactaacattcagactcacaacttccagcttatgttcgtccggcatcacaagggtgagctcaagtatgatgcagcttctaaccaaagctccctgtggaacacaatcaatgtaacaactgtcagagcctttattatatggagaatcctggatcaaccgtcatgcgccagtaccatggataataagaccaactatgcctgtgttagcagacacagcaaatgcacagatatctatttaacactaatacagtcccttggttacgtttgctcatgcaatgatgggtaccaaggcaatccattcatacaggatggctgcttgcgtgacagaggtaatttaatctgctgcaaaaactatgatagtgatattcctttatcagagtttaaatgacattgcaaaaagaggggacggggagattcttctgcaatgtagtaaaaggcttgtgatcaaaactcaagtatgtaaccataaaaactatccaaaattgaaagcttatacgaaacaacacattttcaaagaaaaataagggggcaacatgttataagtaaatcctagagctaaatatgtattccattaatcacatattataagtaattccagcaatttagtgttgcttcaaaccccgagttatttcttgtttcctaggtagaattaaatccaattaactgggatattaatagtctcagcaatttacagagcagcaccagaacattctagaccaaatatgcatgatagatactgaactaatgatcatatcagttgggagaattgtgattaatttcatataagagtttctgagacatccgctaaacaaatgaaatcaaagaactataaaccataaagatgatgtagatgatccaaaacattggcccatgaaaagcccaagaaagttactatgtgtacatataatctagcatatgtatagtgataggattttagaaaaatagatcttttggacaggatgattttatacaactctcaatacaacagttacttttgaatcacttaatttgattttctaaaataggatataatccattccaacaaaagaagaactgcgctagaaagtgtgggagcatcgatatcccatatccatttggcctagaagaaggctgttctgcaaggaaactatttcagctgaactgcacagacatgtcttcatccagcctccaactgaacgacaaatacactgtaaagtacataaaagtcaatgaagggcttatgggcatcgaggattcctcatatgtcaagcagggcatgtattggatgaatttaccggatgagcctagactctatagtggctctggtgaatcagcctcagtgcaatgggctgttgccaatcttacttgtcaagaggcatggcaaaacAaatcaggttatgcttgtgttagcatcaatagcacatgtttggctgtgaactcagcagatggttacattggttatcggtgtgaatgtatgcctggatttcaaggaaatccatatgtccaaaatggatgtcaaggttatcatcctttctcTttctccctctggaatttgggaatcagatcctctgacgtcggcgtaggatcacggatgaatggttgatatcgcgtgactgcagggtaacgtcgagaagcccgacgtcagaggatctgattccccttccggacggcagatccgctgcaattcctccccaggcaccggacccttggccgtcggccgccggattcatcgtcgcccagcctcctccctccttccccgccgcagccgctggttctgctccatgaggaccgtcgcagtggcctgctgccctcggggccgcGAgagccgccggcggcggcgcggacggcgagccgcccagcgccagcagccgcgttagccaccggcggcggtggcatggacgacgggccgcccagcgccagcagcccgccaccggcacggcggcgtgcggccacgcgcccctgcatctcatttatactggatcgatttccctgtaaaactaaatcctcgacctgaactccatttactgactttaatttagtgaaagtaaacatgcattctctgttctcattaagattttatattatacaaatgcatggtataatataaaaaaagattgatactgactagacactagcacagatgagatcgagaaaggtatcgatattattttttaaagaaaatctctctgatcatgcgaagatgttgcagatattgatgaatgcatgacaccaggaagttgcaaaggactatgccataatattgtaggaagttatcgttgcatggcctgtcctgatagaacacagtatgatactacaacaatgcagtgtatttcaacaaaaagataaaatcttatattaggtgagtcccatacactattcttttttgcagtggatatgaaccaaacggaacatctcaacctgagctaatgatcatacttactacaggtattgccattgggcttagctgcggcttccgcatcctgcttgtcagcttaagtacaatgTtttttattcatagatggaaaagtggcatacaaaagcaactacgaaggaagcattttagaaagaaccaaggtcttctcctagaacaactaatatcttcagacgaaaatgcaagtgacaaaacaaagattttctcTttagatgaactagaaaaggcaacaaataactttgatcctacacgtatcattggtcatggagggcatggtatggtgtacaaaggcattttatcatatcaacgcgtggttgccataaaaaggtctaaggacattcaggaaggtgagatcagccaatttattaatgaggtagctattctctcccaaataaatcaccgaaatatagtaaaactatttggatgttgtcttgaaaccgaggtccctctattggtatatgacttcattcccaacggctcattatttggtatcctacattctggttcaagcggtcatttttctttgtcatgggatgattgtctaagaattgccgtggaagctgcaggagcactctattacctccattccgcagcttcagtatcgatctttcatcgtgatgtgaaatcctccaatatacttctagatgcaaactacactgctaaagtatcagactttggtgcttcaagattggttccaattgactaaactcacattgtcacgaatgttcaaggcacatttggttacctagatccggagtattaccataccgggcagctgaacgagaagagtgatgtatatagttttggtgtggtacttgtggaactactactcagaagagaacctatttttacgacggtgtcaggatcaaggcaaaacttgtccaactactttctttgggagctgaaggcaaggccaatcaaagaggtagttgcagctcaagttcgtgaagaagctactgaggaagagatAaaatgtgttggttctcttgcagaaatgtgcttaaggctccgaggtgaagatagacctacgatgaagcaagttgaaatggctttacagttcttcagaacaaaaaggtctatgtcatggcatggtgcaccagaaaatagtgatgagatgcaaccattgctacacagaaggtctgaggttagttgtgagtcattggctattaacttgggtgtcaatgctaatcctgagactggaaatagccacaaatgctatagcttggagcaagagttcatttcatctattggactgccacgctaa
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| CDS seq | atgagcctcttcttgggtggactacttccgctgctcctacttgtgtttactaccttggcccctattgcgcaagcttctgaaggcattgctagccttccatcagctgccacacttgcgggttgccaaagaagctgcggtaatctgaccttcgactacccctttggcattggatcatcccattgcttcaggcaacctgacttcgagctcatctgcgacaacaCcacgcaacccccaaggctgttattcaggaatggcaccactgaaatcgtccaaacccctgatagtgggtatctcaacgctgtttttcccaatcttggcatctccatgaaacccaatgtcagtgtgtacaacatgtcattggaacctcctgggaaatctttcctccttgcatatgctgaactaaacatcacaggctgcgacttggatatataccagctggtgctcaacgaaaacgaatatgtgcccgcgaagctttgttccgttacatgcccgaacgaaagaataacagaggctgttgctaggcaggactgcaatggcaccggatgttgcacctttggtactaacattcagactcacaacttccagcttatgttcgtccggcatcacaagggtgagctcaagtatgatgcagcttctaaccaaagctccctgtggaacacaatcaatgtaacaactgtcagagcctttattatatggagaatcctggatcaaccgtcatgcgccagtaccatggataataagaccaactatgcctgtgttagcagacacagcaaatgcacagatatctatttaacactaatacagtcccttggttacgtttgctcatgcaatgatgggtaccaaggcaatccattcatacaggatggctgcttgcgtgacagaggatataatccattccaacaaaagaagaactgcgctagaaagtgtgggagcatcgatatcccatatccatttggcctagaagaaggctgttctgcaaggaaactatttcagctgaactgcacagacatgtcttcatccagcctccaactgaacgacaaatacactgtaaagtacataaaagtcaatgaagggcttatgggcatcgaggattcctcatatgtcaagcagggcatgtattggatgaatttaccggatgagcctagactctatagtggctctggtgaatcagcctcagtgcaatgggctgttgccaatcttacttgtcaagaggcatggcaaaacAaatcaggttatgcttgtgttagcatcaatagcacatgtttggctgtgaactcagcagatggttacattggttatcggtgtgaatgtatgcctggatttcaaggaaatccatatgtccaaaatggatgtcaaggtattgccattgggcttagctgcggcttccgcatcctgcttgtcagcttaagtacaatgTtttttattcatagatggaaaagtggcatacaaaagcaactacgaaggaagcattttagaaagaaccaaggtcttctcctagaacaactaatatcttcagacgaaaatgcaagtgacaaaacaaagattttctcTttagatgaactagaaaaggcaacaaataactttgatcctacacgtatcattggtcatggagggcatggtatggtgtacaaaggcattttatcatatcaacgcgtggttgccataaaaaggtctaaggacattcaggaaggtgagatcagccaatttattaatgaggtagctattctctcccaaataaatcaccgaaatatagtaaaactatttggatgttgtcttgaaaccgaggtccctctattggtatatgacttcattcccaacggctcattatttggtatcctacattctggttcaagcggtcatttttctttgtcatgggatgattgtctaagaattgccgtggaagctgcaggagcactctattacctccattccgcagcttcagtatcgatctttcatcgtgatgtgaaatcctccaatatacttctagatgcaaactacactgctaaagtatcagactttggcacatttggttacctagatccggagtattaccataccgggcagctgaacgagaagagtgatgtatatagttttggtgtggtacttgtggaactactactcagaagagaacctatttttacgacggtgtcaggatcaaggcaaaacttgtccaactactttctttgggagctgaaggcaaggccaatcaaagaggtagttgcagctcaagttcgtgaagaagctactgaggaagagatAaaatgtgttggttctcttgcagaaatgtgcttaaggctccgaggtgaagatagacctacgatgaagcaagttgaaatggctttacagttcttcagaacaaaaaggtctatgtcatggcatggtgcaccagaaaatagtgatgagatgcaaccattgctacacagaaggtctgaggttagttgtgagtcattggctattaacttgggtgtcaatgctaatcctgagactggaaatagccacaaatgctatagcttggagcaagagttcatttcatctattggactgccacgctaa
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| Protein seq | MSLFLGGLLPLLLLVFTTLAPIAQASEGIASLPSAATLAGCQRSCGNLTFDYPFGIGSSHCFRQPDFELICDNTTQPPRLLFRNGTTEIVQTPDSGYLNAVFPNLGISMKPNVSVYNMSLEPPGKSFLLAYAELNITGCDLDIYQLVLNENEYVPAKLCSVTCPNERITEAVARQDCNGTGCCTFGTNIQTHNFQLMFVRHHKGELKYDAASNQSSLWNTINVTTVRAFIIWRILDQPSCASTMDNKTNYACVSRHSKCTDIYLTLIQSLGYVCSCNDGYQGNPFIQDGCLRDRGYNPFQQKKNCARKCGSIDIPYPFGLEEGCSARKLFQLNCTDMSSSSLQLNDKYTVKYIKVNEGLMGIEDSSYVKQGMYWMNLPDEPRLYSGSGESASVQWAVANLTCQEAWQNKSGYACVSINSTCLAVNSADGYIGYRCECMPGFQGNPYVQNGCQGIAIGLSCGFRILLVSLSTMFFIHRWKSGIQKQLRRKHFRKNQGLLLEQLISSDENASDKTKIFSLDELEKATNNFDPTRIIGHGGHGMVYKGILSYQRVVAIKRSKDIQEGEISQFINEVAILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGILHSGSSGHFSLSWDDCLRIAVEAAGALYYLHSAASVSIFHRDVKSSNILLDANYTAKVSDFGTFGYLDPEYYHTGQLNEKSDVYSFGVVLVELLLRREPIFTTVSGSRQNLSNYFLWELKARPIKEVVAAQVREEATEEEIKCVGSLAEMCLRLRGEDRPTMKQVEMALQFFRTKRSMSWHGAPENSDEMQPLLHRRSEVSCESLAINLGVNANPETGNSHKCYSLEQEFISSIGLPR |
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| Function | Wall-associated receptor kinase-like 9 [UniProtKB/Swiss-Prot:Q9C9L5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007270 | OsLima_04g0007270.01 | Chr04 | 14536195 | 14540627 | + | NAM | ||
| CDS seq | atgagcctcttcttgggtggactacttccgctgctcctacttgtgtttactaccttggcccctattgcgcaagcttctgaaggcattgctagccttccatcagctgccacacttgcgggttgccaaagaagctgcggtaatctgaccttcgactacccctttggcattggatcatcccattgcttcaggcaacctgacttcgagctcatctgcgacaacaCcacgcaacccccaaggctgttattcaggaatggcaccactgaaatcgtccaaacccctgatagtgggtatctcaacgctgtttttcccaatcttggcatctccatgaaacccaatgtcagtgtgtacaacatgtcattggaacctcctgggaaatctttcctccttgcatatgctgaactaaacatcacaggctgcgacttggatatataccagctggtgctcaacgaaaacgaatatgtgcccgcgaagctttgttccgttacatgcccgaacgaaagaataacagaggctgttgctaggcaggactgcaatggcaccggatgttgcacctttggtactaacattcagactcacaacttccagcttatgttcgtccggcatcacaagggtgagctcaagtatgatgcagcttctaaccaaagctccctgtggaacacaatcaatgtaacaactgtcagagcctttattatatggagaatcctggatcaaccgtcatgcgccagtaccatggataataagaccaactatgcctgtgttagcagacacagcaaatgcacagatatctatttaacactaatacagtcccttggttacgtttgctcatgcaatgatgggtaccaaggcaatccattcatacaggatggctgcttgcgtgacagaggatataatccattccaacaaaagaagaactgcgctagaaagtgtgggagcatcgatatcccatatccatttggcctagaagaaggctgttctgcaaggaaactatttcagctgaactgcacagacatgtcttcatccagcctccaactgaacgacaaatacactgtaaagtacataaaagtcaatgaagggcttatgggcatcgaggattcctcatatgtcaagcagggcatgtattggatgaatttaccggatgagcctagactctatagtggctctggtgaatcagcctcagtgcaatgggctgttgccaatcttacttgtcaagaggcatggcaaaacAaatcaggttatgcttgtgttagcatcaatagcacatgtttggctgtgaactcagcagatggttacattggttatcggtgtgaatgtatgcctggatttcaaggaaatccatatgtccaaaatggatgtcaaggtattgccattgggcttagctgcggcttccgcatcctgcttgtcagcttaagtacaatgTtttttattcatagatggaaaagtggcatacaaaagcaactacgaaggaagcattttagaaagaaccaaggtcttctcctagaacaactaatatcttcagacgaaaatgcaagtgacaaaacaaagattttctcTttagatgaactagaaaaggcaacaaataactttgatcctacacgtatcattggtcatggagggcatggtatggtgtacaaaggcattttatcatatcaacgcgtggttgccataaaaaggtctaaggacattcaggaaggtgagatcagccaatttattaatgaggtagctattctctcccaaataaatcaccgaaatatagtaaaactatttggatgttgtcttgaaaccgaggtccctctattggtatatgacttcattcccaacggctcattatttggtatcctacattctggttcaagcggtcatttttctttgtcatgggatgattgtctaagaattgccgtggaagctgcaggagcactctattacctccattccgcagcttcagtatcgatctttcatcgtgatgtgaaatcctccaatatacttctagatgcaaactacactgctaaagtatcagactttggcacatttggttacctagatccggagtattaccataccgggcagctgaacgagaagagtgatgtatatagttttggtgtggtacttgtggaactactactcagaagagaacctatttttacgacggtgtcaggatcaaggcaaaacttgtccaactactttctttgggagctgaaggcaaggccaatcaaagaggtagttgcagctcaagttcgtgaagaagctactgaggaagagatAaaatgtgttggttctcttgcagaaatgtgcttaaggctccgaggtgaagatagacctacgatgaagcaagttgaaatggctttacagttcttcagaacaaaaaggtctatgtcatggcatggtgcaccagaaaatagtgatgagatgcaaccattgctacacagaaggtctgaggttagttgtgagtcattggctattaacttgggtgtcaatgctaatcctgagactggaaatagccacaaatgctatagcttggagcaagagttcatttcatctattggactgccacgctaa
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| Protein seq | MSLFLGGLLPLLLLVFTTLAPIAQASEGIASLPSAATLAGCQRSCGNLTFDYPFGIGSSHCFRQPDFELICDNTTQPPRLLFRNGTTEIVQTPDSGYLNAVFPNLGISMKPNVSVYNMSLEPPGKSFLLAYAELNITGCDLDIYQLVLNENEYVPAKLCSVTCPNERITEAVARQDCNGTGCCTFGTNIQTHNFQLMFVRHHKGELKYDAASNQSSLWNTINVTTVRAFIIWRILDQPSCASTMDNKTNYACVSRHSKCTDIYLTLIQSLGYVCSCNDGYQGNPFIQDGCLRDRGYNPFQQKKNCARKCGSIDIPYPFGLEEGCSARKLFQLNCTDMSSSSLQLNDKYTVKYIKVNEGLMGIEDSSYVKQGMYWMNLPDEPRLYSGSGESASVQWAVANLTCQEAWQNKSGYACVSINSTCLAVNSADGYIGYRCECMPGFQGNPYVQNGCQGIAIGLSCGFRILLVSLSTMFFIHRWKSGIQKQLRRKHFRKNQGLLLEQLISSDENASDKTKIFSLDELEKATNNFDPTRIIGHGGHGMVYKGILSYQRVVAIKRSKDIQEGEISQFINEVAILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGILHSGSSGHFSLSWDDCLRIAVEAAGALYYLHSAASVSIFHRDVKSSNILLDANYTAKVSDFGTFGYLDPEYYHTGQLNEKSDVYSFGVVLVELLLRREPIFTTVSGSRQNLSNYFLWELKARPIKEVVAAQVREEATEEEIKCVGSLAEMCLRLRGEDRPTMKQVEMALQFFRTKRSMSWHGAPENSDEMQPLLHRRSEVSCESLAINLGVNANPETGNSHKCYSLEQEFISSIGLPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0307900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g24220 | SBH | 2.251413 | 2.234253 | 0.935653 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0307900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0007380 | SBH | 0.337207 | 0.0 | 1.598833 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0008040 | SBH | 0.182152 | 0.381324 | 1.294446 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0007770 | SBH | 1.922314 | 0.457320 | 3.740401 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0007550 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007640 | RBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0226000 | RBH | 0.0295675 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0007390 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0225600 | RBH | 0 | 0 | 0.0519355 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007520 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007600 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0007430 | SBH | 0.356466 | 0.198420 | 0.751504 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007790 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G007470 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0007580 | RBH | 0.0 | 1.870683 | 0.0 |
