Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_04g0007600 | OGI:04046380 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr04:15650180-15652634 | ||||||||
| Gene Symbol | WAK32, OsWAK32, WAK41, OsWAK41 | ||||||||||
| DNA seq | atgagcctcttcttgggtggactacttccgctgctcctacttgtgtttactaccttggcccctattgcgcaagcttctgaaggcattgctagccttccatcagctgccacacttgcgggttgccaaagaagctgcggtaatctgaccttcgactacccctttggcattggatcatcccattgcttcaggcaacctgacttcgagctcatctgcgacaacaccacgcaacccccaaggctgttattcaggaatggcaccactgaaatcgtccaaacccctgatagtggtaagatacacaccattacttctattaaagctttatttatttttagatgttgaaactgcatagcctcTtttctgaaagtaaaaaaaaaaaatgtacaacgaaatgtatagtccaatagagatagtctcctcaccaggtgatcattatgactctactactggagtagtatactcgtcaatttttattatcatttctttgtctccagggtatctcaacgctgtttttcccaatgttggcatctccatgaaacccaatgtcagtgtgtacaacatgtcattggaacctcctgggaaatctttcctccttgcatatgctgaactaaacatcacaggctgcgacttggatatataccagctggtgctcaacgaaaacgaatatgtgcccgcgaagcattgttccgttacatgcccgaacgaaATgagAATaacagaggctgttgctaggcaggactgcaatggcaccggatgttgcacctttggtactaacattcagactcacaacttccagcttatgttcgtccggcatcacaagggtgagctcaagtatgatgcagcttctaaccaaagctCcctgtggaACacaatcaatgtaacagctgtcagagcctttattatatggagaatcctggatcaaccgtcatgcgccagtaccatggataataagaccaactatgcctgtgttagcagacacagcaaatgcacagatatctatttaacactaatacagtcccttggttacgtttgctcatgcaatgatgggtaccaaggcaatccattcatacaggatggctgcttgcgtgacagaggtaatttaatctgctgcaaaaactatgatagtgatattcctttatcagagtttaaatgacattgcAAaaagaggggacggggagattcttctgcaatgtagtaaaaggcttgtgatcaaaactcaagtatgtaaccataaaaactatccaaaattgaaagcttatacgaaacaacacattttcaaagaaaaataagggggcaacatgTtataagtaaatcctagagctaaatatgtattccattaatcacatatTATAagtaattccagcaaTttagtgttgcttcaaaccccgagttatttcttgtttcctaggtagaattaaatccaattaactgggatattaatagtctcagcaatttacagagcagcaccagaacattctagaccaaatatgcatgatagatactgaactaatgatcatatcagttgggagaattgtgattaatttcatataagagtttctgagacatccgctaaacaaatgaaatcaaagaactataaaccataaagatgatgtagatgatccaaaacattggcccatgaaaagcccaagaaagttactatgtgtatatataatctagcatatgtatagtgataggattttagaaaaatagatcttttggacaggatgattttatacaactctcaatacaacagttacttttgaatcacttaatttgattttctaaaataggatataatccattccaacaaaagaagaactgcgctagaaagtgtgggagcatcgatatcccatatccatttggcctagaagaaggctgttctgcaaggaaactatttcagctgaactgcacagacatgtcttcatccagcctccaactgaacgacaaatacactgtaaagtacataaaagtcaatgaggggcttatgggcatcgaggattcctcatatgtcaagcagggcatgtattggatgaatttaccggatgagcctagactctatagtggctctggtgaatcagcctcagtgcaatgggctgttgccaatcttacttgtcaagaggcatggcaaaacaaatcaggttatgcttgtgttagcatcaatagcacatgtttggctgtgaactcagcagatggttacattggttatcggtgtgaatgtatgcctggatttcaaggaaatccatatgtccaaaatggatgtcaaggttatcatcctttctctttctccctctggaatttgggaatcagatcctctgacgtcggccttctcgacgttactctgcagtcacacgatatcaaccatccatccgcgatcctacggtggctcgcgcgtgcgcctctccatctggctcccgcggctctttctagcggctctcgtgctcggcggctctctttctga
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| CDS seq | atgagcctcttcttgggtggactacttccgctgctcctacttgtgtttactaccttggcccctattgcgcaagcttctgaaggcattgctagccttccatcagctgccacacttgcgggttgccaaagaagctgcggtaatctgaccttcgactacccctttggcattggatcatcccattgcttcaggcaacctgacttcgagctcatctgcgacaacaccacgcaacccccaaggctgttattcaggaatggcaccactgaaatcgtccaaacccctgatagtgggtatctcaacgctgtttttcccaatgttggcatctccatgaaacccaatgtcagtgtgtacaacatgtcattggaacctcctgggaaatctttcctccttgcatatgctgaactaaacatcacaggctgcgacttggatatataccagctggtgctcaacgaaaacgaatatgtgcccgcgaagcattgttccgttacatgcccgaacgaaATgagAATaacagaggctgttgctaggcaggactgcaatggcaccggatgttgcacctttggtactaacattcagactcacaacttccagcttatgttcgtccggcatcacaagggtgagctcaagtatgatgcagcttctaaccaaagctCcctgtggaACacaatcaatgtaacagctgtcagagcctttattatatggagaatcctggatcaaccgtcatgcgccagtaccatggataataagaccaactatgcctgtgttagcagacacagcaaatgcacagatatctatttaacactaatacagtcccttggttacgtttgctcatgcaatgatgggtaccaaggcaatccattcatacaggatggctgcttgcgtgacagaggatataatccattccaacaaaagaagaactgcgctagaaagtgtgggagcatcgatatcccatatccatttggcctagaagaaggctgttctgcaaggaaactatttcagctgaactgcacagacatgtcttcatccagcctccaactgaacgacaaatacactgtaaagtacataaaagtcaatgaggggcttatgggcatcgaggattcctcatatgtcaagcagggcatgtattggatgaatttaccggatgagcctagactctatagtggctctggtgaatcagcctcagtgcaatgggctgttgccaatcttacttgtcaagaggcatggcaaaacaaatcaggttatgcttgtgttagcatcaatagcacatgtttggctgtgaactcagcagatggttacattggttatcggtgtgaatgtatgcctggatttcaaggaaatccatatgtccaaaatggatgtcaaggttatcatcctttctctttctccctctggaatttgggaatcagatcctctgacgtcggccttctcgacgttactctgcagtcacacgatatcaaccatccatccgcgatcctacggtggctcgcgcgtgcgcctctccatctggctcccgcggctctttctagcggctctcgtgctcggcggctctctttctga
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| Protein seq | MSLFLGGLLPLLLLVFTTLAPIAQASEGIASLPSAATLAGCQRSCGNLTFDYPFGIGSSHCFRQPDFELICDNTTQPPRLLFRNGTTEIVQTPDSGYLNAVFPNVGISMKPNVSVYNMSLEPPGKSFLLAYAELNITGCDLDIYQLVLNENEYVPAKHCSVTCPNEMRITEAVARQDCNGTGCCTFGTNIQTHNFQLMFVRHHKGELKYDAASNQSSLWNTINVTAVRAFIIWRILDQPSCASTMDNKTNYACVSRHSKCTDIYLTLIQSLGYVCSCNDGYQGNPFIQDGCLRDRGYNPFQQKKNCARKCGSIDIPYPFGLEEGCSARKLFQLNCTDMSSSSLQLNDKYTVKYIKVNEGLMGIEDSSYVKQGMYWMNLPDEPRLYSGSGESASVQWAVANLTCQEAWQNKSGYACVSINSTCLAVNSADGYIGYRCECMPGFQGNPYVQNGCQGYHPFSFSLWNLGIRSSDVGLLDVTLQSHDINHPSAILRWLARAPLHLAPAALSSGSRARRLSF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_04g0007600 | OsGoSa_04g0007600.01 | Chr04 | 15650180 | 15652634 | + | NAM | ||
| CDS seq | atgagcctcttcttgggtggactacttccgctgctcctacttgtgtttactaccttggcccctattgcgcaagcttctgaaggcattgctagccttccatcagctgccacacttgcgggttgccaaagaagctgcggtaatctgaccttcgactacccctttggcattggatcatcccattgcttcaggcaacctgacttcgagctcatctgcgacaacaccacgcaacccccaaggctgttattcaggaatggcaccactgaaatcgtccaaacccctgatagtgggtatctcaacgctgtttttcccaatgttggcatctccatgaaacccaatgtcagtgtgtacaacatgtcattggaacctcctgggaaatctttcctccttgcatatgctgaactaaacatcacaggctgcgacttggatatataccagctggtgctcaacgaaaacgaatatgtgcccgcgaagcattgttccgttacatgcccgaacgaaATgagAATaacagaggctgttgctaggcaggactgcaatggcaccggatgttgcacctttggtactaacattcagactcacaacttccagcttatgttcgtccggcatcacaagggtgagctcaagtatgatgcagcttctaaccaaagctCcctgtggaACacaatcaatgtaacagctgtcagagcctttattatatggagaatcctggatcaaccgtcatgcgccagtaccatggataataagaccaactatgcctgtgttagcagacacagcaaatgcacagatatctatttaacactaatacagtcccttggttacgtttgctcatgcaatgatgggtaccaaggcaatccattcatacaggatggctgcttgcgtgacagaggatataatccattccaacaaaagaagaactgcgctagaaagtgtgggagcatcgatatcccatatccatttggcctagaagaaggctgttctgcaaggaaactatttcagctgaactgcacagacatgtcttcatccagcctccaactgaacgacaaatacactgtaaagtacataaaagtcaatgaggggcttatgggcatcgaggattcctcatatgtcaagcagggcatgtattggatgaatttaccggatgagcctagactctatagtggctctggtgaatcagcctcagtgcaatgggctgttgccaatcttacttgtcaagaggcatggcaaaacaaatcaggttatgcttgtgttagcatcaatagcacatgtttggctgtgaactcagcagatggttacattggttatcggtgtgaatgtatgcctggatttcaaggaaatccatatgtccaaaatggatgtcaaggttatcatcctttctctttctccctctggaatttgggaatcagatcctctgacgtcggccttctcgacgttactctgcagtcacacgatatcaaccatccatccgcgatcctacggtggctcgcgcgtgcgcctctccatctggctcccgcggctctttctagcggctctcgtgctcggcggctctctttctga
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| Protein seq | MSLFLGGLLPLLLLVFTTLAPIAQASEGIASLPSAATLAGCQRSCGNLTFDYPFGIGSSHCFRQPDFELICDNTTQPPRLLFRNGTTEIVQTPDSGYLNAVFPNVGISMKPNVSVYNMSLEPPGKSFLLAYAELNITGCDLDIYQLVLNENEYVPAKHCSVTCPNEMRITEAVARQDCNGTGCCTFGTNIQTHNFQLMFVRHHKGELKYDAASNQSSLWNTINVTAVRAFIIWRILDQPSCASTMDNKTNYACVSRHSKCTDIYLTLIQSLGYVCSCNDGYQGNPFIQDGCLRDRGYNPFQQKKNCARKCGSIDIPYPFGLEEGCSARKLFQLNCTDMSSSSLQLNDKYTVKYIKVNEGLMGIEDSSYVKQGMYWMNLPDEPRLYSGSGESASVQWAVANLTCQEAWQNKSGYACVSINSTCLAVNSADGYIGYRCECMPGFQGNPYVQNGCQGYHPFSFSLWNLGIRSSDVGLLDVTLQSHDINHPSAILRWLARAPLHLAPAALSSGSRARRLSF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0307500 | SBH | 2.979444 | 3.117526 | 3.556712 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g24220 | SBH | 2.251413 | 2.234253 | 0.935653 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0307500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0007380 | SBH | 0.337207 | 0.0 | 1.598833 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0008040 | SBH | 0.182152 | 0.381324 | 1.294446 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0007770 | SBH | 1.922314 | 0.457320 | 3.740401 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0007540 | RBH | 0.000000 | 0.026023 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007640 | RBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0226500 | SBH | 0.01724 | 0.0174595 | 0.045095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0007390 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0225600 | SBH | 0 | 0 | 0.0519355 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0007270 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007520 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007620 | SBH | 3.537372 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0007400 | SBH | 0.472611 | 0.000000 | 1.159566 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007790 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G007470 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0007580 | RBH | 0.0 | 1.870683 | 0.0 |
