Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g24220 | OGI:04046380 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:13863222-13868260 | ||||||||
| Gene Symbol | WAK32, OsWAK32 | ||||||||||
| DNA seq | AAAGCAAAACCTTCATGCTCATCGATATTACTCTTATCGCCAAACAGTCCCACAAATCAAGCATCACATTAAATTTCGTAGCACTGAAGAGTGAAAACTTCAGGTGTGTGGAGATGAGCCTCTTCGATGGATTACTTCCTCTGCTACTAATTGTGTTTACTATGACCCCTGTGATACAAGCTTCAAACAGAACTACAAGCCTTCCATCTGCTGCCACGCTTGCAGGTTGCCAAAGAAGCTGCAGTAATCTGACCATCGACTATCCCTTTGGAATTGGATCATCCCATTGCTCTAGGCAGCCCGATTTCGAGCTCATCTGCAACAATACCACACAACCACCAAGGCTGTTATTCAAGAATGGCACCACTGAGATCATTGACTCTCCCAGTACTGGTAAGATATACAACCAACTATAAATCGGATTTCAGATATACAACCAACTATAAATCGGATTTCAATTTGAATTGATGTTACCAGTTGAGCTGTGGGGATTTTAGGTTGAAATTTTAATATTCAACTAAAAATATTAAGTTGAATGGTGATATTTTGGACCAAAGAGGGGGCAAGGCGCTGCCTTTGTTGGCAGAGAGGGCAAGAAATAACAAATCCCATACTTTTCTAGGTATAAAAAGCCGTTAAAATATAAACTCCTTCATGTAAGAGCTCCCCTTTTGTGCCTAGATTATTTGCTGGGGAATTACCTTCTAGTTATTGAGGGCGTTATTAAAGGCTTTGTTTTAGACTAATGAAAATGCAATCTAACAACCACTCTAAAGTAAAAGCTCTGTCCTTTTGGTTTACCTCCTCTTTTAGTTATGCCTAACAGCACTCATCAATTATTAATATCTGTAACTTCCTCTCAATTATTTTTATTTTTCTCTCCCAGAATATTTGGACGTTATGTTTTCCCATTCCATCTCCATGAAATCCAATGTCAGTGTGTACAACATGTCATGGGATGCTCCTGGGAAATCTTTCACCCTTGGATATGCTAGACTAAACATCACCGGCTGTGATTTCGATATATACCAGGTGCTCGATCAAAGTGGAAATGTTCCTGCCAAGCTTTGCAACGTTACATGCCCAAACAGGGGAATCACAGAGGACATTGCTAGGCAGGACTGCAATGGCACCGGATGCTGCTCCATCGATGTTCCAATTCGTGCTCAGACCTTACAGCTTATGTTTGTCCGCCATGGCAAAGGGGCGGTCGAACTTGACGCACAATCCAACCAAAGCTCCCTGTGGAGCACAATCAATGTAACAACAGTTTACGCTGTCATTTTGTGGAGAATCCTGGACCAACCGACGTGTGCCAGCACCTTCGATAACAGGACCAACTATGCCTGTATTAGTGAGCACAGCAAATGCATGGATGGCTATTTCGCACCGATTCTTGGTTACAATTGCTTATGTGATGGTGGGTACCAAGGAAATCCATATATACTAGATGGCTGCTCACGTGATAGAGGTAATTAATTTAATCTGCTCAAATAATTATACACCATGAACCTCGATATGGCCTTTTCTGTTTATACATAAGATGAAATTACGATGGTAGGTCAGGAAATTTCTCAGTCACATGCAGGTTCATGGGGTTAAATAATTATACTCTGCAAAATTGCAAGCAGGTTGACTTCATTATACTTTTTGATAGAATGACAGGGGGAACATATGTGATATTGTAGAATGGTGAAGCAGAGATAGCCTCAACACAATAATTCTATTGAAAGATATAGTAACATATAGGCCGGGACCTTCCTTATCCTTTAACCGACTTATAGAAACATAATCGAGGGATTAGGTAGAAAACCCAACCGGGTACATATGGAAGGAAATAACGATTCTAACAGATATCCCTAGAACAAAAAAAATATGCCGTCAATTTCGTTTTATAAAAAGAACAATTTTGCTTTATCCTAAGCCATTTTATCTTTGAGTCAAATTTTCCAATATTTTCTCATTCAACTCATTTCATTTGATTGCACTATTATGCATATGAACAACACTTAGCTTGTATCAAGAATAGCTAGAGTTAGTTCAGCCATATTAGCGCAACCATAATAGTACTTATCCAACAGCTAAAATCATTAAGGGAAGAAACAATATTTGTTATTAGATGATAGTACTATGAGTCTATGAGGCCAAGCTTGTCCACTCATGGGTACCCGTACCCATTGACACACTCCTTCCAAATCCAACTATAAGTTAGCCAAATAAACTAGTGTGGGTCGGCCAACATGCTTCTCCGGCTAAACATACTTAACTGACCCCCCCCCCCCCGGTTCAATTAGCTGCTGACCAAGTTACCACATGAACGAGATCCAAATTTACAGTAGGATTAGTTCAATATATATTAATTGTCTGTACACCATATAAACCAAGAGAGTCTTAGGCTAATCCTTTTGGGAGAAGCAAATTAAGAGAAAATCCTAAAAACGCATGGATTACCCCCCACCCCCCCCCCACCCCGTGGCACAAAATTTGGAGAATGGCGGCCAGTTTTTCAGCACATCTCCTTCAGACAGTTGAATGCTATACAAATTCTCTAAACAACCGTTACTTGTGAAACTGTTAATTTCATTTCACAAAACAGGATATAATCCATTCCAACAGAAGGATGTCTGCGACAGAAAGTGCGGGAGCATTGATGTCCCATATCCATTTGGCCTAGAAGAAGGGTGCGCTGCAAGGAAATCATTTCAGCTAAACTGCACAAACATGTTATCGTCCAGCCTCCAACTGAACGATGAATACCATGTAACGTATATAAATGTCAGCAATGGGCTCATGGGCGTAGAAGACACCACAGATTACAAACAGTACATGTATGGGATGCGTGTGACGCAGGAGCCTCAACTCTATATCGGATCTGGGGAATCAGCCTCAGTGCAATGGGCTGTTGCTAATCTAACCTGCCTAGAGGCACAGCAAAATATATCTGGATATGCTTGTGTTAGCATCAATAGCACATGCTTGGGTGTCAACTCAACAGATGATTACATTGGGTATCGGTGTAGTTGCACACTTGGCTTCCAAGGAAATCCATATATCCAAGATGGTTGCCAAGGTTATAATCTCTGCCCTTCTCCCTCTCCCTTCCGATCTCGCTCTTTCTCTGATCTTACTAAGTGATGTTGCAGATATTAATGAATGTTTGGTGCCAAACAAATGTAAAGGAGTATGCTACAATACTCCTGGAAGTTACCGTTGCACTGCTTGCCCTGATAAAACACAGTATGATATGACAACAATGCAGTGCACCCGGACAAGAAGACAAAGTCTTATGTTAGGTGAGGTCCAGAGTCCTATACACTCTTGATCTTATAATGAACATGACAACATACTAACGAGCATATAAACTATTACAGGTGTTGTCATTGGACTTAGCTGTGGCTTCAGCATCCTACTTCTCAGCTTAGGAATAATGCTTCTCATTCATAGATGGAAAAAAGACATACAAAAGCAACTACGAAGGAAGCATTTCCAAAAGAACCAAGGACTTCTGCTGGAACAACTAATATCTTCGGATGAAAATGCAAGTGAGAACACAAAGATATTCTCTTTAGATGAGCTAGAGAAGGCAACAAACAACTTTGATCCTACACGTATTCTTGGTCATGGAGGGCATGGCATGGTGTACAAAGGCATTCTATCTGACCAACGTGTGGTTGCAATAAAAAGGTCTAAGCACATTGAGGAAGGAGAGATCAGTCAATTCATTAATGAGGTAGCAATTCTGTCTCAAATAAATCATCGAAATATAGTGAAATTATTTGGATGTTGTCTTGAAACCGAGGTCCCATTATTGGTATATGACTTTATTCCCAATGGTTCATTATTTGGTATTCTCCATTCTGGTTCAAACAATGGTTTCTCCTTGTCATGGGATGACTGCCTAAGAATTGCAGTGGAAGCTGCAGGAGCTCTCTATTATCTCCATTCGGCAGCTTCAGTATCAGTGTTCCATCGTGATGTGAAATCCTCTAATATACTTCTAGATGCAAACTACACCGCTAAAGTATCAGACTTTGGTGCTTCGAGATTGGTTCCCATTGACCAAACTCATGTTGTCACAAATGTACAAGGCACATTTGGTTACTTAGATCCAGAGTATTATCATACCGGGCAGCTGAATGAGAAGAGTGATGTATATAGTTTTGGTGTGGTACTTGTGGAACTACTACTCAGAAAAGAGCCTATTTTTACAAGGGTGTCAGGATCAAAGCAGAATTTGTCCAATTACTTTCTCTGGGAACTGAAGGTGAAGCCAATCACGGAGATTGTTGCTGCTCAAGTTCGTGAGGAAGCTACTGACGAAGAGATAGAGAGTGTCGCTTCTCTTGCACAGATGTGCTTGAGGCTCCGAAGTGAAGATAGACCTACTATGAAGCAAGTTGAAATGAATTTACAGTTCTTGCGAACAAAAAGGTTGAACTCATGCCCTGATGCTCTAGACAAAGCTGAAGAGATGCAGCCTTTGCTATGTACAAGATCTGAAGCTAGTTGTGCATCATTGGCGATTAACTTGGGTGACAGTTATAACCCTGAGTCTCAAAGTAGCCACAAATGCTATAGCTTGGAGCAAGAGTTTAGTTCATCAGTTGGGTTGCCACGGTAAGTTGCTCAGAGCCATGCTATAATATGAAATTCAATTGAGCTGTGGAGGAAAATGATTGGATGTTTTCAGATCTAGACAGGTCTGAAATGTATCAACTCCTCAATGTGGTCTACCATTTTATTAATTATTATCCCAAATAATGTACAATTCCTTTTATATCTCTTAGGTACCAAGTATCATGTATGCTAGAGCACTTGTTTATAAACAACAGGATTAGTCTGATGCGCTATTATGCTGATACTGTGATTGCTCATAACATGCGTACACTTCTTTGTTATGAGAAGCACATACTTCCAATGTGGGTGTTTCAAAAGTTTAGTCCCATGTATAAAATATATGATGAATATATCTAGGTGAGAAATGGTTGGAAAATACTACAAGGAAATGCTATATATTTTCAACATTGCTCAACCAGTTC
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| CDS seq | ATGTTTTCCCATTCCATCTCCATGAAATCCAATGTCAGTGTGTACAACATGTCATGGGATGCTCCTGGGAAATCTTTCACCCTTGGATATGCTAGACTAAACATCACCGGCTGTGATTTCGATATATACCAGGTGCTCGATCAAAGTGGAAATGTTCCTGCCAAGCTTTGCAACGTTACATGCCCAAACAGGGGAATCACAGAGGACATTGCTAGGCAGGACTGCAATGGCACCGGATGCTGCTCCATCGATGTTCCAATTCGTGCTCAGACCTTACAGCTTATGTTTGTCCGCCATGGCAAAGGGGCGGTCGAACTTGACGCACAATCCAACCAAAGCTCCCTGTGGAGCACAATCAATGTAACAACAGTTTACGCTGTCATTTTGTGGAGAATCCTGGACCAACCGACGTGTGCCAGCACCTTCGATAACAGGACCAACTATGCCTGTATTAGTGAGCACAGCAAATGCATGGATGGCTATTTCGCACCGATTCTTGGTTACAATTGCTTATGTGATGGTGGGTACCAAGGAAATCCATATATACTAGATGGCTGCTCACGTGATAGAGGATATAATCCATTCCAACAGAAGGATGTCTGCGACAGAAAGTGCGGGAGCATTGATGTCCCATATCCATTTGGCCTAGAAGAAGGGTGCGCTGCAAGGAAATCATTTCAGCTAAACTGCACAAACATGTTATCGTCCAGCCTCCAACTGAACGATGAATACCATGTAACGTATATAAATGTCAGCAATGGGCTCATGGGCGTAGAAGACACCACAGATTACAAACAGTACATGTATGGGATGCGTGTGACGCAGGAGCCTCAACTCTATATCGGATCTGGGGAATCAGCCTCAGTGCAATGGGCTGTTGCTAATCTAACCTGCCTAGAGGCACAGCAAAATATATCTGGATATGCTTGTGTTAGCATCAATAGCACATGCTTGGGTGTCAACTCAACAGATGATTACATTGGGTATCGGTGTAGTTGCACACTTGGCTTCCAAGGAAATCCATATATCCAAGATGGTTGCCAAGATATTAATGAATGTTTGGTGCCAAACAAATGTAAAGGAGTATGCTACAATACTCCTGGAAGTTACCGTTGCACTGCTTGCCCTGATAAAACACAGTATGATATGACAACAATGCAGTGCACCCGGACAAGAAGACAAAGTCTTATGTTAGGTGTTGTCATTGGACTTAGCTGTGGCTTCAGCATCCTACTTCTCAGCTTAGGAATAATGCTTCTCATTCATAGATGGAAAAAAGACATACAAAAGCAACTACGAAGGAAGCATTTCCAAAAGAACCAAGGACTTCTGCTGGAACAACTAATATCTTCGGATGAAAATGCAAGTGAGAACACAAAGATATTCTCTTTAGATGAGCTAGAGAAGGCAACAAACAACTTTGATCCTACACGTATTCTTGGTCATGGAGGGCATGGCATGGTGTACAAAGGCATTCTATCTGACCAACGTGTGGTTGCAATAAAAAGGTCTAAGCACATTGAGGAAGGAGAGATCAGTCAATTCATTAATGAGGTAGCAATTCTGTCTCAAATAAATCATCGAAATATAGTGAAATTATTTGGATGTTGTCTTGAAACCGAGGTCCCATTATTGGTATATGACTTTATTCCCAATGGTTCATTATTTGGTATTCTCCATTCTGGTTCAAACAATGGTTTCTCCTTGTCATGGGATGACTGCCTAAGAATTGCAGTGGAAGCTGCAGGAGCTCTCTATTATCTCCATTCGGCAGCTTCAGTATCAGTGTTCCATCGTGATGTGAAATCCTCTAATATACTTCTAGATGCAAACTACACCGCTAAAGTATCAGACTTTGGTGCTTCGAGATTGGTTCCCATTGACCAAACTCATGTTGTCACAAATGTACAAGGCACATTTGGTTACTTAGATCCAGAGTATTATCATACCGGGCAGCTGAATGAGAAGAGTGATGTATATAGTTTTGGTGTGGTACTTGTGGAACTACTACTCAGAAAAGAGCCTATTTTTACAAGGGTGTCAGGATCAAAGCAGAATTTGTCCAATTACTTTCTCTGGGAACTGAAGGTGAAGCCAATCACGGAGATTGTTGCTGCTCAAGTTCGTGAGGAAGCTACTGACGAAGAGATAGAGAGTGTCGCTTCTCTTGCACAGATGTGCTTGAGGCTCCGAAGTGAAGATAGACCTACTATGAAGCAAGTTGAAATGAATTTACAGTTCTTGCGAACAAAAAGGTTGAACTCATGCCCTGATGCTCTAGACAAAGCTGAAGAGATGCAGCCTTTGCTATGTACAAGATCTGAAGCTAGTTGTGCATCATTGGCGATTAACTTGGGTGACAGTTATAACCCTGAGTCTCAAAGTAGCCACAAATGCTATAGCTTGGAGCAAGAGTTTAGTTCATCAGTTGGGTTGCCACGGTAA
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| Protein seq | MFSHSISMKSNVSVYNMSWDAPGKSFTLGYARLNITGCDFDIYQVLDQSGNVPAKLCNVTCPNRGITEDIARQDCNGTGCCSIDVPIRAQTLQLMFVRHGKGAVELDAQSNQSSLWSTINVTTVYAVILWRILDQPTCASTFDNRTNYACISEHSKCMDGYFAPILGYNCLCDGGYQGNPYILDGCSRDRGYNPFQQKDVCDRKCGSIDVPYPFGLEEGCAARKSFQLNCTNMLSSSLQLNDEYHVTYINVSNGLMGVEDTTDYKQYMYGMRVTQEPQLYIGSGESASVQWAVANLTCLEAQQNISGYACVSINSTCLGVNSTDDYIGYRCSCTLGFQGNPYIQDGCQDINECLVPNKCKGVCYNTPGSYRCTACPDKTQYDMTTMQCTRTRRQSLMLGVVIGLSCGFSILLLSLGIMLLIHRWKKDIQKQLRRKHFQKNQGLLLEQLISSDENASENTKIFSLDELEKATNNFDPTRILGHGGHGMVYKGILSDQRVVAIKRSKHIEEGEISQFINEVAILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGILHSGSNNGFSLSWDDCLRIAVEAAGALYYLHSAASVSVFHRDVKSSNILLDANYTAKVSDFGASRLVPIDQTHVVTNVQGTFGYLDPEYYHTGQLNEKSDVYSFGVVLVELLLRKEPIFTRVSGSKQNLSNYFLWELKVKPITEIVAAQVREEATDEEIESVASLAQMCLRLRSEDRPTMKQVEMNLQFLRTKRLNSCPDALDKAEEMQPLLCTRSEASCASLAINLGDSYNPESQSSHKCYSLEQEFSSSVGLPR |
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| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g24220 | LOC_Os04g24220.1 | Chr04 | 13863249 | 13868260 | + | MSU_osa1r7 | ||
| CDS seq | ATGTTTTCCCATTCCATCTCCATGAAATCCAATGTCAGTGTGTACAACATGTCATGGGATGCTCCTGGGAAATCTTTCACCCTTGGATATGCTAGACTAAACATCACCGGCTGTGATTTCGATATATACCAGGTGCTCGATCAAAGTGGAAATGTTCCTGCCAAGCTTTGCAACGTTACATGCCCAAACAGGGGAATCACAGAGGACATTGCTAGGCAGGACTGCAATGGCACCGGATGCTGCTCCATCGATGTTCCAATTCGTGCTCAGACCTTACAGCTTATGTTTGTCCGCCATGGCAAAGGGGCGGTCGAACTTGACGCACAATCCAACCAAAGCTCCCTGTGGAGCACAATCAATGTAACAACAGTTTACGCTGTCATTTTGTGGAGAATCCTGGACCAACCGACGTGTGCCAGCACCTTCGATAACAGGACCAACTATGCCTGTATTAGTGAGCACAGCAAATGCATGGATGGCTATTTCGCACCGATTCTTGGTTACAATTGCTTATGTGATGGTGGGTACCAAGGAAATCCATATATACTAGATGGCTGCTCACGTGATAGAGGATATAATCCATTCCAACAGAAGGATGTCTGCGACAGAAAGTGCGGGAGCATTGATGTCCCATATCCATTTGGCCTAGAAGAAGGGTGCGCTGCAAGGAAATCATTTCAGCTAAACTGCACAAACATGTTATCGTCCAGCCTCCAACTGAACGATGAATACCATGTAACGTATATAAATGTCAGCAATGGGCTCATGGGCGTAGAAGACACCACAGATTACAAACAGTACATGTATGGGATGCGTGTGACGCAGGAGCCTCAACTCTATATCGGATCTGGGGAATCAGCCTCAGTGCAATGGGCTGTTGCTAATCTAACCTGCCTAGAGGCACAGCAAAATATATCTGGATATGCTTGTGTTAGCATCAATAGCACATGCTTGGGTGTCAACTCAACAGATGATTACATTGGGTATCGGTGTAGTTGCACACTTGGCTTCCAAGGAAATCCATATATCCAAGATGGTTGCCAAGATATTAATGAATGTTTGGTGCCAAACAAATGTAAAGGAGTATGCTACAATACTCCTGGAAGTTACCGTTGCACTGCTTGCCCTGATAAAACACAGTATGATATGACAACAATGCAGTGCACCCGGACAAGAAGACAAAGTCTTATGTTAGGTGTTGTCATTGGACTTAGCTGTGGCTTCAGCATCCTACTTCTCAGCTTAGGAATAATGCTTCTCATTCATAGATGGAAAAAAGACATACAAAAGCAACTACGAAGGAAGCATTTCCAAAAGAACCAAGGACTTCTGCTGGAACAACTAATATCTTCGGATGAAAATGCAAGTGAGAACACAAAGATATTCTCTTTAGATGAGCTAGAGAAGGCAACAAACAACTTTGATCCTACACGTATTCTTGGTCATGGAGGGCATGGCATGGTGTACAAAGGCATTCTATCTGACCAACGTGTGGTTGCAATAAAAAGGTCTAAGCACATTGAGGAAGGAGAGATCAGTCAATTCATTAATGAGGTAGCAATTCTGTCTCAAATAAATCATCGAAATATAGTGAAATTATTTGGATGTTGTCTTGAAACCGAGGTCCCATTATTGGTATATGACTTTATTCCCAATGGTTCATTATTTGGTATTCTCCATTCTGGTTCAAACAATGGTTTCTCCTTGTCATGGGATGACTGCCTAAGAATTGCAGTGGAAGCTGCAGGAGCTCTCTATTATCTCCATTCGGCAGCTTCAGTATCAGTGTTCCATCGTGATGTGAAATCCTCTAATATACTTCTAGATGCAAACTACACCGCTAAAGTATCAGACTTTGGTGCTTCGAGATTGGTTCCCATTGACCAAACTCATGTTGTCACAAATGTACAAGGCACATTTGGTTACTTAGATCCAGAGTATTATCATACCGGGCAGCTGAATGAGAAGAGTGATGTATATAGTTTTGGTGTGGTACTTGTGGAACTACTACTCAGAAAAGAGCCTATTTTTACAAGGGTGTCAGGATCAAAGCAGAATTTGTCCAATTACTTTCTCTGGGAACTGAAGGTGAAGCCAATCACGGAGATTGTTGCTGCTCAAGTTCGTGAGGAAGCTACTGACGAAGAGATAGAGAGTGTCGCTTCTCTTGCACAGATGTGCTTGAGGCTCCGAAGTGAAGATAGACCTACTATGAAGCAAGTTGAAATGAATTTACAGTTCTTGCGAACAAAAAGGTTGAACTCATGCCCTGATGCTCTAGACAAAGCTGAAGAGATGCAGCCTTTGCTATGTACAAGATCTGAAGCTAGTTGTGCATCATTGGCGATTAACTTGGGTGACAGTTATAACCCTGAGTCTCAAAGTAGCCACAAATGCTATAGCTTGGAGCAAGAGTTTAGTTCATCAGTTGGGTTGCCACGGTAA
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| Protein seq | MFSHSISMKSNVSVYNMSWDAPGKSFTLGYARLNITGCDFDIYQVLDQSGNVPAKLCNVTCPNRGITEDIARQDCNGTGCCSIDVPIRAQTLQLMFVRHGKGAVELDAQSNQSSLWSTINVTTVYAVILWRILDQPTCASTFDNRTNYACISEHSKCMDGYFAPILGYNCLCDGGYQGNPYILDGCSRDRGYNPFQQKDVCDRKCGSIDVPYPFGLEEGCAARKSFQLNCTNMLSSSLQLNDEYHVTYINVSNGLMGVEDTTDYKQYMYGMRVTQEPQLYIGSGESASVQWAVANLTCLEAQQNISGYACVSINSTCLGVNSTDDYIGYRCSCTLGFQGNPYIQDGCQDINECLVPNKCKGVCYNTPGSYRCTACPDKTQYDMTTMQCTRTRRQSLMLGVVIGLSCGFSILLLSLGIMLLIHRWKKDIQKQLRRKHFQKNQGLLLEQLISSDENASENTKIFSLDELEKATNNFDPTRILGHGGHGMVYKGILSDQRVVAIKRSKHIEEGEISQFINEVAILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGILHSGSNNGFSLSWDDCLRIAVEAAGALYYLHSAASVSVFHRDVKSSNILLDANYTAKVSDFGASRLVPIDQTHVVTNVQGTFGYLDPEYYHTGQLNEKSDVYSFGVVLVELLLRKEPIFTRVSGSKQNLSNYFLWELKVKPITEIVAAQVREEATDEEIESVASLAQMCLRLRSEDRPTMKQVEMNLQFLRTKRLNSCPDALDKAEEMQPLLCTRSEASCASLAINLGDSYNPESQSSHKCYSLEQEFSSSVGLPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g24220 | LOC_Os04g24220.2 | Chr04 | 13863244 | 13868079 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCTGCTCACGTGATAGAGAAGGATGTCTGCGACAGAAAGTGCGGGAGCATTGATGTCCCATATCCATTTGGCCTAGAAGAAGGGTGCGCTGCAAGGAAATCATTTCAGCTAAACTGCACAAACATGTTATCGTCCAGCCTCCAACTGAACGATGAATACCATGTAACGTATATAAATGTCAGCAATGGGCTCATGGGCGTAGAAGACACCACAGATTACAAACAGTACATGTATGGGATGCGTGTGACGCAGGAGCCTCAACTCTATATCGGATCTGGGGAATCAGCCTCAGTGCAATGGGCTGTTGCTAATCTAACCTGCCTAGAGGCACAGCAAAATATATCTGGATATGCTTGTGTTAGCATCAATAGCACATGCTTGGGTGTCAACTCAACAGATGATTACATTGGGTATCGGTGTAGTTGCACACTTGGCTTCCAAGGAAATCCATATATCCAAGATGGTTGCCAAGATATTAATGAATGTTTGGTGCCAAACAAATGTAAAGGAGTATGCTACAATACTCCTGGAAGTTACCGTTGCACTGCTTGCCCTGATAAAACACAGTATGATATGACAACAATGCAGTGCACCCGGACAAGAAGACAAAGTCTTATGTTAGGTGTTGTCATTGGACTTAGCTGTGGCTTCAGCATCCTACTTCTCAGCTTAGGAATAATGCTTCTCATTCATAGATGGAAAAAAGACATACAAAAGCAACTACGAAGGAAGCATTTCCAAAAGAACCAAGGACTTCTGCTGGAACAACTAATATCTTCGGATGAAAATGCAAGTGAGAACACAAAGATATTCTCTTTAGATGAGCTAGAGAAGGCAACAAACAACTTTGATCCTACACGTATTCTTGGTCATGGAGGGCATGGCATGGTGTACAAAGGCATTCTATCTGACCAACGTGTGGTTGCAATAAAAAGGTCTAAGCACATTGAGGAAGGAGAGATCAGTCAATTCATTAATGAGGTAGCAATTCTGTCTCAAATAAATCATCGAAATATAGTGAAATTATTTGGATGTTGTCTTGAAACCGAGGTCCCATTATTGGTATATGACTTTATTCCCAATGGTTCATTATTTGGTATTCTCCATTCTGGTTCAAACAATGGTTTCTCCTTGTCATGGGATGACTGCCTAAGAATTGCAGTGGAAGCTGCAGGAGCTCTCTATTATCTCCATTCGGCAGCTTCAGTATCAGTGTTCCATCGTGATGTGAAATCCTCTAATATACTTCTAGATGCAAACTACACCGCTAAAGTATCAGACTTTGGTGCTTCGAGATTGGTTCCCATTGACCAAACTCATGTTGTCACAAATGTACAAGGCACATTTGGTTACTTAGATCCAGAGTATTATCATACCGGGCAGCTGAATGAGAAGAGTGATGTATATAGTTTTGGTGTGGTACTTGTGGAACTACTACTCAGAAAAGAGCCTATTTTTACAAGGGTGTCAGGATCAAAGCAGAATTTGTCCAATTACTTTCTCTGGGAACTGAAGGTGAAGCCAATCACGGAGATTGTTGCTGCTCAAGTTCGTGAGGAAGCTACTGACGAAGAGATAGAGAGTGTCGCTTCTCTTGCACAGATGTGCTTGAGGCTCCGAAGTGAAGATAGACCTACTATGAAGCAAGTTGAAATGAATTTACAGTTCTTGCGAACAAAAAGGTTGAACTCATGCCCTGATGCTCTAGACAAAGCTGAAGAGATGCAGCCTTTGCTATGTACAAGATCTGAAGCTAGTTGTGCATCATTGGCGATTAACTTGGGTGACAGTTATAACCCTGAGTCTCAAAGTAGCCACAAATGCTATAGCTTGGAGCAAGAGTTTAGTTCATCAGTTGGGTTGCCACGGTAA
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| Protein seq | MAAHVIEKDVCDRKCGSIDVPYPFGLEEGCAARKSFQLNCTNMLSSSLQLNDEYHVTYINVSNGLMGVEDTTDYKQYMYGMRVTQEPQLYIGSGESASVQWAVANLTCLEAQQNISGYACVSINSTCLGVNSTDDYIGYRCSCTLGFQGNPYIQDGCQDINECLVPNKCKGVCYNTPGSYRCTACPDKTQYDMTTMQCTRTRRQSLMLGVVIGLSCGFSILLLSLGIMLLIHRWKKDIQKQLRRKHFQKNQGLLLEQLISSDENASENTKIFSLDELEKATNNFDPTRILGHGGHGMVYKGILSDQRVVAIKRSKHIEEGEISQFINEVAILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGILHSGSNNGFSLSWDDCLRIAVEAAGALYYLHSAASVSVFHRDVKSSNILLDANYTAKVSDFGASRLVPIDQTHVVTNVQGTFGYLDPEYYHTGQLNEKSDVYSFGVVLVELLLRKEPIFTRVSGSKQNLSNYFLWELKVKPITEIVAAQVREEATDEEIESVASLAQMCLRLRSEDRPTMKQVEMNLQFLRTKRLNSCPDALDKAEEMQPLLCTRSEASCASLAINLGDSYNPESQSSHKCYSLEQEFSSSVGLPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g24220 | LOC_Os04g24220.3 | Chr04 | 13863222 | 13868260 | + | MSU_osa1r7 | ||
| CDS seq | ATGCTTGTGTTAGCATCAATAGCACATGCTTGGGTGTCAACTCAACAGATGATTACATTGGGTATCGGTGTAGTTGCACACTTGGCTTCCAAGGAAATCCATATATCCAAGATGGTTGCCAAGGTTATAATCTCTGCCCTTCTCCCTCTCCCTTCCGATCTCGCTCTTTCTCTGATCTTACTAAGTGATGTTGCAGATATTAATGAATGTTTGGTGCCAAACAAATGTAAAGGAGTATGCTACAATACTCCTGGAAGTTACCGTTGCACTGCTTGCCCTGATAAAACACAGTATGATATGACAACAATGCAGTGCACCCGGACAAGAAGACAAAGTCTTATGTTAGGTGTTGTCATTGGACTTAGCTGTGGCTTCAGCATCCTACTTCTCAGCTTAGGAATAATGCTTCTCATTCATAGATGGAAAAAAGACATACAAAAGCAACTACGAAGGAAGCATTTCCAAAAGAACCAAGGACTTCTGCTGGAACAACTAATATCTTCGGATGAAAATGCAAGTGAGAACACAAAGATATTCTCTTTAGATGAGCTAGAGAAGGCAACAAACAACTTTGATCCTACACGTATTCTTGGTCATGGAGGGCATGGCATGGTGTACAAAGGCATTCTATCTGACCAACGTGTGGTTGCAATAAAAAGGTCTAAGCACATTGAGGAAGGAGAGATCAGTCAATTCATTAATGAGGTAGCAATTCTGTCTCAAATAAATCATCGAAATATAGTGAAATTATTTGGATGTTGTCTTGAAACCGAGGTCCCATTATTGGTATATGACTTTATTCCCAATGGTTCATTATTTGGTATTCTCCATTCTGGTTCAAACAATGGTTTCTCCTTGTCATGGGATGACTGCCTAAGAATTGCAGTGGAAGCTGCAGGAGCTCTCTATTATCTCCATTCGGCAGCTTCAGTATCAGTGTTCCATCGTGATGTGAAATCCTCTAATATACTTCTAGATGCAAACTACACCGCTAAAGTATCAGACTTTGGTGCTTCGAGATTGGTTCCCATTGACCAAACTCATGTTGTCACAAATGTACAAGGCACATTTGGTTACTTAGATCCAGAGTATTATCATACCGGGCAGCTGAATGAGAAGAGTGATGTATATAGTTTTGGTGTGGTACTTGTGGAACTACTACTCAGAAAAGAGCCTATTTTTACAAGGGTGTCAGGATCAAAGCAGAATTTGTCCAATTACTTTCTCTGGGAACTGAAGGTGAAGCCAATCACGGAGATTGTTGCTGCTCAAGTTCGTGAGGAAGCTACTGACGAAGAGATAGAGAGTGTCGCTTCTCTTGCACAGATGTGCTTGAGGCTCCGAAGTGAAGATAGACCTACTATGAAGCAAGTTGAAATGAATTTACAGTTCTTGCGAACAAAAAGGTTGAACTCATGCCCTGATGCTCTAGACAAAGCTGAAGAGATGCAGCCTTTGCTATGTACAAGATCTGAAGCTAGTTGTGCATCATTGGCGATTAACTTGGGTGACAGTTATAACCCTGAGTCTCAAAGTAGCCACAAATGCTATAGCTTGGAGCAAGAGTTTAGTTCATCAGTTGGGTTGCCACGGTAA
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| Protein seq | MLVLASIAHAWVSTQQMITLGIGVVAHLASKEIHISKMVAKVIISALLPLPSDLALSLILLSDVADINECLVPNKCKGVCYNTPGSYRCTACPDKTQYDMTTMQCTRTRRQSLMLGVVIGLSCGFSILLLSLGIMLLIHRWKKDIQKQLRRKHFQKNQGLLLEQLISSDENASENTKIFSLDELEKATNNFDPTRILGHGGHGMVYKGILSDQRVVAIKRSKHIEEGEISQFINEVAILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGILHSGSNNGFSLSWDDCLRIAVEAAGALYYLHSAASVSVFHRDVKSSNILLDANYTAKVSDFGASRLVPIDQTHVVTNVQGTFGYLDPEYYHTGQLNEKSDVYSFGVVLVELLLRKEPIFTRVSGSKQNLSNYFLWELKVKPITEIVAAQVREEATDEEIESVASLAQMCLRLRSEDRPTMKQVEMNLQFLRTKRLNSCPDALDKAEEMQPLLCTRSEASCASLAINLGDSYNPESQSSHKCYSLEQEFSSSVGLPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.251413 | 2.234253 | 0.935653 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0307500 | RBH | 2.979444 | 3.117526 | 3.556712 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g23720 | SBH | 0.0 | 0.0 | 0.108691 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0307500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0007380 | RBH | 0.337207 | 0.0 | 1.598833 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0008020 | RBH | 0.318914 | 0.0 | 1.752894 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0007770 | RBH | 1.922314 | 0.457320 | 3.740401 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0007500 | RBH | 0.025217 | 0.011119 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007610 | RBH | 6.646790 | 1.032601 | 9.589929 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0226000 | RBH | 0.0295675 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0007360 | RBH | 0.366230 | 0.000000 | 0.943096 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0224700 | RBH | 6.504722 | 0.7199415 | 2.082265 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0007200 | RBH | 0.640560 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007450 | RBH | 0.156075 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007560 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0007400 | RBH | 0.472611 | 0.000000 | 1.159566 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007740 | RBH | 0.125284 | 0.434284 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G007420 | RBH | 0.049118 | 0.278644 | 0.566179 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0007540 | RBH | 0.000000 | 0.000000 | 1.412558 |
