Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0007090 | OGI:04045990 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:14278522-14291797 | ||||||||
| Gene Symbol | NPH1B, PHOT2, OsPHOT2, OsNPH1b | ||||||||||
| DNA seq | agctttattgcaaaaaaaaaaaagtaagacaaagaaccttcaaaactttctaaaatatattataaacactactactttattgaatcatctccaagaaaagagtataagctttacaagaatatatcctatttatgtgaagtactaagatctttacctaaccaaaagaataatcatgtacacgattttgaggcagctcagactgaaaacactcaacaatgctAaCATCACATGAAGcATCACATGAAGCctCttattactatacaggaaaaagaactgctccagtttgatctaccctgcaaaaatcaatacaatcagtctaccaattgccaacaaacatagttaaaacataacgtctgcaaagaaaggaaggaaggaacaggagagaaaacggtcatagaaattcccgatcgaccgagcgccgtttccgtataagggataccgtttctgaccgtaccgtttttggctatctttaaattttttttctaatttctttctgcatcgtattaatatcgatattgagtagttaaaatgataaatatggtcaattaccggccgatcgagcatcgtttctgaagagatgctaccgattccgatcgttttcgaccgttttcacccctaaataggacgaccttgttctatctaaataaaatggtaataaactctccccctatatggactagaacacttcaaagttgcctcaccttaaaatgtatcaagatttaggggaacatcttcgtcaggcttcgcttttggttgagtttccttgccaattagtttcagaggaacatctagttcaggggggctctgcacatatagttatttagataatcagtgatgcactaaacaaactatctttgtcgaaatgtcttgatgctcgaaacattcaaagtaccatgcaacgtatgagtggccaattgatgtcttgaaaaaaggaatgttgcttgatgtcatttgcaccagcatttgaacctatacgatttgaaggatctctctgaagtaatccatggattaattgctttgctgcaagactaacctggagaatcatagtgatattaataaatgagaacaaatgaaaactaaaatacaataacgaagtgtaagataggcataaacattttcttatctaacacatgctaacacatacccttaacatgatatcttacaggcttgctggacagattgtaaattggactcaacctttgtagttgcaaattgaatacagtatgcaaaaaatattggcctgcatgacaggaaacttcactggccagttctctaaaaaagaagttcttaccggaatgctactgggaaatgtaaggtctttgtgcagtatgttataaaatgtctttttcctgttctttcctcggaaaggtgtacgcccatacagcatctcatacaatagaattcctatagcatgggaattgatgttagctggatgtcatcttattattagcataatgcatatcaaacaatataataatgccatatcaaacaagttctcatggttaggtacttaggtgtacctgaaaacacatatctagtacttacacatcttataattatctagagagactagggatgtattggtgtggtagatacatatacagatctcagaaataaacacatacgaagggcagtgtaccttcgggtgcttctaggcatttgacatctaagcagcatggttcaattgacacatggagaatttggataggttggagtcagcacataaacccacatgttctaatcatagcacctaccggtaccttttacatggaggccacttccatggaagggctaggcatgagaggatttttagaagggatattacaccattcaattttatgtttgttttgatccctgttatctagttaaactgactaacctacttaatgtgatgtaaattaaaaaagtgtgatatagatcagttatagcaggcaaaagtttgctgcagtgcaacttgtgacatgagttttgtttaattatgcatagcagtgtagcacaaaacaattaacttaaccgctaattatttagtcaaagtggtaatatggactattctctgggtggaaacccatgttcaaaatcttgtttgaatggcacatggattattatgaataatttgatgagattttagttgaacctcaaacatcttttaggtgattgctataagactataccaactaccaagaagatcgaataaataaaactaactcttttaatccattctgtgcaattcttgtaatcaactagttcataagatgacccaaaaaaatatattaggttattgcttaccgagagcccaccaatcgattgcacttgtatgccctgcacccgttataacctcctaaaacgatgcaaaagttagacaacaatcatgctacttgctgagaaagaatcaaagaccaacattgacaacaagcggtttcgtaagatgaactgaaaaatgaaaagcatacatgtaaaattaactaaaagataaaaaggctaaacctgggtcttatgataatgcatatcaagttgaaattaaaacaattactccaacaataagcataaagaaaacacaaggatcattcttactggagcgatatactcttcagtaccaacaaatgaatttgatggagtggaaggttctgagacaaatgttgggggGAgaaattcttgtgaccttcttcgttttaatgatgtggaattttttatcacctgcaggagatttaaccaacatcagggcaatatcaagtgttttaagtgcgatagtttcttatgaacaacaaaaacacatgctggaaaccaccaacaagtactcaatataaacatgttcttgacaccattactgactttgaatactatgcaagtggaaaactcaaagctcattactcaggaatgaagtatatttttgttttaaagtttgcgatcacacattctagcatacagactataaatgaccaaaaaaaatgaaggtaaatggaattagcaaatattctataaaaactgcagcaagcctgaaagtttattccctcaacttacgtggggttttgaagtcgtcaaaaatgaaagatcaaaatcagtcagtacaatgtgcccatctgcttggagcaaaatgttttctggcttcagatcacggtatataatacctacagcaggaataacacatgcagattagcaatctttgatctcataataagtccaatggcaaatcagtatctttaatgaaatagaaatagatcgccgattgttaacagtaaacattattaatacttggtttcactcaatgaatctgttcaaaagataggagcactaaattatgtaaacacatctatacctaggcaatgaaggtactcgagaccaattacaacctctgcagcataaaacctacagaacggatcaaaataatgttatataataaaagagagagtaggtgagtcgaatgatatagttaacataagatgataaggattcatggcaagaatctcaattatcttatttttatatttctttactcctttaaatgttccttgtgggggtggtggtgagtctgcctcacataactagtcaaaagagaagactgaaaagaatggatatcgaagacttctggtgggtgttcgagaaaaagactactggtagtattctgttacatttctttcttcttctttttttttttcatacatgtagttcttcaatcctacactacatgtatgtgacaaaattatttactagaaacaatttcattctattgagcctcagaaacagtatatcacaacaactgaactcaacagctgtttgcaaataatcattcacaagttagcaaaagcttcaaacattgcaatccatgcaaacccagcataatttattaagaaaaaagcaactttatcatcattatgggaaaactacatacttggatagtttctacaacagaacataattgtttgtatcaaatttgggggaaggaataatctggctggcagatccaagttcaatcaagtagttcatatttacttgtttgtctgcccatggggtttacatggcagtaaaagcaatgcagtagttccccaaatcagtttccacagttttatttatcataagctagtaaaatagattaaaaaatgtaataatatgtaagatgtaagtacttttgatgacacatctttaggtggccaaacctattacaggaacaaataTTATttGtaaaaaaaactatattccatacttgggaaattatgtaagagatacacttcaagaatgaaagaaaaggtaaattttgaaaacatcatgattttcaaatagtggtatgtacgaactgacccagatgcaggaaattggaacaggtaccttgcacattcttccctgaaaattttcatgggttgcctatcaagcactgcaaagagttctcctcccggacaaaagtctgttatgagacaaacatgtgttggcgtctgaaaatagacaacattagtaaagaaccttgtggtttttaaattagctggataatgaaaaactagtatggaagttaatacaaaaactactctctgatgtttgtgaaatgatgaacaccttacagaagccatatttaactgaaactatgagtaattattttatttaactagcaatacaaaatatctgggataaagcattggtcataacaatgtcagtctaacctgaaatgaagtatacaatgttgggagaaatggatgatccaatagtgcgtatatttctctttcaatacaagctcgatgtacctgcaagagagagggagttgaagtaattcttgcaccttatcgtactagcaacagcaggaaaaaggttgatcacatccagcatggatggaaatacaataacaacataacagcatgctcatgttcatgaattaaaattaccttgttgcggttcaacatcactgacttgtccatggccttcattgcaaataattcaccacttccttgtagctcaaccaagtgcacactgaattcaaaaacaaagagatggtatagagatacttaaacagggtggtatagaggcactataacctagacatgcaccatacagaaaagaacaagggagcctaagaaatatactctatccaattagaaaaaacctaacattaatattatactagttgtatccagtcctgctaacttgtagccacataaaagaatatttctggtttgtcctgttaaggccattaaagaatttcaagatcccgtcgaaccacttagtgtcatggtagtgactatgtttactagaaaaacattttaattaatccaaactagacaaaactatgactgacgttaccagttttttatgatgcagtcaaagtaaacattttgtttctgacagcatgctttcagaagatataacaaccatctatcagttagcaaaaagacatcgtatagaagattgttcaggacatcttagtacctgccagtgtcaccacagccgagaggttttacaggcttgaagtgtttcaagccaatcttctcccctaaatttgtagcctgcatgccaaataataataaaaaatttatggtttcatagaatttaatttgggagtttcagttactatgtttcccattcaattttaggatgcacattatcatatttttaaaaatcagagactattaagagcttagggtgctaccagcgtccagccatttagtacaatccaggggtacacatttgctactttggaacatgtgtgattacagtcattactttgcatggattcatgtactaattcactggaacatgtttatagtcatgcggacagcacgctcaaactaacctgggtgctggttagcgcttttgacggaccatatataatataatgcataaacttttttCttgaatatgcaagagagttgcgtatcatttcattatgaagaagagaaaacggaggaacggggagggacccctctcctcaccaagaccccacaggcctaggccttaacaaactcaaaacctgaaaccgacctcatcccggcagagctagcgacctatctatataatgcataaaatgtctaaagcgtttgcatgttgagcatctttctggatgatctgtacatgtaaacaaaaatcgcaaaaacagaaactacatgatctatcgtgaaactaatattatacagagtgcaaacgtacatatctagttatgagatacacactacacatcctcgttattcacatctagatttactaggtggcaaaacatcgcaaataatgagaccatgtacgctttcaataagcttagttatgaactaagttactgcctgaaaatgggtgaaatgcagcatcatacataatatgtgctctcaattacctccatcatgttctacagtagtcctactttcagcataatagtaacaaacatataggcgctggacaacacaccatcatcccttttctgccttgctttctatttaacaaatattaatgcattcttgccaggaaatctggttaaaaaggataacatgagacactattggcgttaacctccaagttcacttactcagctagtcagaggaattcttttgctataagcctagcattatatattatagagtattatctaatttggtacagtttgactcattgctgctgcagtaatagaatttgcgcaccaaacaacaaaattaacgtaccttttctatagctatccaagaagggttattccgtttgtgaggttttggagaaacacgcattgagtgaattgcccacaaatcctctggtctctgagacaaagatagattgtgttatgccccaacataacagagaaaagttaaataaaatacttctctaactacaatattcatataaggtacattaccattttttctcttttataatttagatattagttgtttacagtgtgctgcacaatggccaagtgcaaacagatgcgaggagcaaaccaaaacaatcatttaagtgtgaacgtcagcgtgcgttcacacggtttgaagttctatatctctgttgaaaaattttatttagggccgcaagccatcgtatcaattttcacattagtcacttataaaatgtttctaaggttgctactaggacctggtggttattgtgctcctgttggtatttcttaaatatttcatcactaagattgaatgaggtttccatttcgccaaataatcttcagttctttatgaagattgatgatggtacaaattatttgtcaccattaaggatttaatccattattgcatagtctagtatgggcccatactatttttcatgtcttgttttgaactgagcaattattgttggttctacatttttttttttgggcgcaaagttggttctacattttcacattgctgacaacttccatcaagaactaactactaataaagtgaaacaacaaaaagcagatgtaccttaccaagttggcatcaggaagctccctgactgcatcatccacattctctgctgtagctttgacctaattggacaccgtatgaaaatgaattagcatatttcaaatcttaaagcaatgctacaacctacaagtctgctcggcgttccaagtttcagtatatgtgaatctgaagcaacaataatatacagggaattattatacaatttactggtatactgaagtatgaaactaagccatccaaaaacacaacatgttatggacctgaaccaactaaacagtatccaactgattgagacgtaaccaaatcaaatgctatccaactgattgacccagtctctagattcatctcatcttattcctaaattaaaatattatacaccaatttatatttgagatcatcgaaatggaaattaatacagtaagctggcctaccaatttggcactctgtatctcagtattctctgaaaggcggttcctgaggggttcaacatgatcacttccatcaagttgcacaccaatgaagtattgaagctccccctgcactcacagatgtgcaatcactaccatgtagtaatcatacccactactagttaaaaattgcaagctccaaaatacttgggagtagcatttggcacagatttttcagataccttctggtcgcgcatgggttgaaggtggaacaagttccagaacttcttccctgatcacacaacaatccaaaatcagacaaaatcatcagagcttctacatcatccaacagtactactgtatatcatctaaaatctcaatatctatccagttcaagagagggattcgtgtccagagtttggagcattaccgctcttggtgtagttgattagctggaccgtgatctccttctgctccctgatggcctccctgatcttgtccaccgtgccctggtcggtctccggcccttgaaggaatctgccacaatcagcaagaccgcaactataaattcaaatgcggaggagaggaaacaattaaattcaccaagcaacaaggccatgggaacagaagcacaaacgtcgagagttacatagcacgaccgccgaccagccatggcggcgcgtgcgcgcgacgctagtagcccacaccaccatggggggcacggtcgcggagataacctcctccgccgccggcgcgcgcgacgggaggatgcgaggttagccgcggcaaggaggggtggatgcggcggcggatcgccgtcggggctaggcttacgcaggccgcggacgacggcggcgacggcggcggcggcggtgggcaaagccgctccgccgttgcgattgggctgggcttgggcttgggcttgggcttgggccttgggatatgagcctagtctgacccaagatcagatgtcacgagtaccgtgtttagtaggtcacaagtccaatttctgtcacatgttgcctgcctttgtagtgtgatttttagttgcactgtctaacttcagtcactatactactataaatattttttaaaccctttttgttttttatttaggcgataagtttagaaatgctatagaattttcttaaatttcacaaaagagaaaaataacatttttcacgaaaggtaatatgcttttttttaatcagcacaatctctagggtggaactttctagagtattttttatctagagaattatgctatcgtatttgttagggtcatggataccacatacctaatagtagttgactaaatctcggcaggacccaccacataccatgtcttatacggaaataatcttcggatatagaaggagttccgcataaggaaggatgaatagagttctacatgaaaacgataaggactactcgggttgtatccatattggttttcctagttctacatggacaaggggacacctatgggtataaatacaaggccccctaggaagagaggggagacaatcaacatacacggaacaacagaagccacaacatacaagccaacatacgccaagacaaacgccagatatcgacaacagagatatacctggatcgaccctatccggttcctacagaggccggccgtagggatctagcgttgtctctgatctcgccgaacacgaactcgaggaggaagactgccctgttgtcgactacgagtcagaccttcagaccgccatatcgacaacagttagataggctaccccaaatattgtattggtgtgattatgatgaataagagcaataccggcttcgaccaacaggatgtagggttattacgtgacagcccgaaccagtataaaaatccctgtctccatctcttttacttcagtttcgcgtataccctagtaccaacgatctccatactatacaaataccggaatcgcgacatcaaacatcgacagtactgtaaaagagttttggcaccgcttaaacttttgaattatccataatcctcacgttaagatatctataataaaaaacatatgccatactccctccgtcccctatataaggtattgtgatattttacttatattgtttgaccattcatcttatttaaaaaaaattaaaattattatttattttatttttgacttactttattatccaaagtattttaagcataactttttgtttttatatttgcacaaattttttaaataagacgagtggtcaaacagtgtaagtaaaatgtcaaaatcccttatattaggggacagagaaagtatataacattaagtttatctactcatgcttaaaaaaaatgcacatttatgaaaaccaatttacaccatcaaccaaacataggcagacgaacatcaagttttttatttatcctaaccacgacaattaggttgtgtgtgtttggctcaaagggatgggaattatccttcgcacacacaatacacaacgactcattatcatatgatttattaaatattaactaaaattttgaaaaataattaatataattttttaaaccacttttctatagataTttttttttaaaaaacatacagtagtttgaggagcatttgcgtgaaaaatgagagaaatgagtgcaccaaagAaacacaaccttacaaattacATaaaccaactcataggcaggcatgtaaatatattataaatatagatatggattctaatccctcgagacaacactttgcccctattcgagaacccaacagaGgggagataaagtttcgggtttTcgtGgcacgcttcttaaactgttaaaatgtgcgattcgtacgaaaattttctatatgaaagttattctaaaatatcagattaatttattttcctaagtttgtaataattaaaactcaattaactacaagttattatcatctcgtttACGTACAACACTAGTTGATTCACTTAACAAACAATAAAAAGATGTGAGCAAGGGGGTTTTGAACTCCCGACCTGCAATTCCTTCCCAGGATCTCTTCCCGCGTGTACTCCGTCAGCTCCAGGAAGCTATCCGACGCGAAGATCTGCACAACCCCCCCACACCACACCCATTCTGTCAGTCACCACCAGCACACGCAAACACGCCGGCGACCGGCGAGAAGAAGAGACCGGCGGCGGCGAAGTGGCTGCTTACGATGGGGTTGTCCGGGATCCTGGGGTCGGTGATGACGAAGTTCTTCTCGATGCGCTCCAGCGTGGTGGCCAGGTCGATCCCCTGCCGGATGTCCTTCTCCCGCTCCGCCCGCTCCCAGCTGTCCGTCCTCTCCACCACCTCCGGCGCCGGCGGTGGCGCCGGCGCCGGCTCCTCCACCACCGCCGGCGCCTCCCTGCTCCCCACCGAGCTCCTCTTCCCGATCTTGAACCTGCCAAAGCATGGACAGACACAACTCTCAGTGTCACTGCCGTCCCGGCAATCTGTCGAACAGGTGGGGTGCGAGAGTCTGACCCCATGAGGGAGGAGCGGCCGGACTTGCGGCCGCTGGCGAGCCGGCTCAGGCGGGACTCCTCCTTCTTCAGGTCCCAGAGCGGCGACTTGAAGGACCCGGCTCCTCCTCCTCCGCCCGAGGGAGTGCCGGGTGCCACGACCGGCGACATGGCGGCCATCTTGTCCGCGTCGCTCATCTTGGGCGGCGTCAGCAGCGCCGCGTCGGCCGGCGCGCGCGCCCCGCGCGGCTGCTTCACCGTCTGCACCACCTCCGTCATCGACGACATCGCCTTGTCCTTCTGCCTCTCTGCGCTCCACACACGCCAATGGCGGCATTGGTAAGACAAagagaattagagaaacatcgaggaaacagaggattccgcggcggcggcggcggtgctcaccgtcgtagcggatgagcgacaccggcaactcgttcggccgcatccgcttgtcgctgagcccctccgtgtacttgctcacctccacctgcatcctgttcgctcataCccCGAATCAGAATCGCAGCCCAGAACTCGAATGCAAAGCTCATCTCATCTCATCAATGGCGACGAACGACTAGTGCTTCGCTTACCCGATGAACTTGATGACCTTGCCGTTGTCGTCGCGGATGGGGGTGACGGTGAGGAGGTTCCAGAACGGGGCGCCGTCCTTGCGGTAGTTGAGCAGGCGGCCGCAGAAGCTGCGGCCGTGCTTGACGGCGTCGCGGATCTTGGCCACCTCGGCGGCGTCGGTGTCGGGGCCCTGGAGGAAGCGGCAGTTGCGGCCGACCACCTCCCTGGGGGAGTAGCCGGTCATGGTGAAGAACCCCTCGCTGGCGTAGATGATGGGGCAGTCCGGGCGCGTCGCGTCGGACACCACGAACGTCTGCTGCAGGCTCGACAGCGCGTCCTTGAGCTCCTGCGACACCCGCGGCAGGGAGTCGTGCGACGCGCGCCCGACGCCGCCGTCCACCGACGACTTGCCGCTCCCCGTGCCGCCGCTGTCGCGCCCCGCCGTCGCCGGCGCCACCGGACGCCACGCCTGCTGCTGGTGGggcgccgctgcttccgctaggcgcatcctcggcgacgatctccaagccggcggtggcgccgccgccgccggaggtggggaacgccatccacttctccaccgcgtcgactatctccttcgagctgctgctgcccgccatggatgccgatgagattgtcctcggctatttatcagcgaaggtgtagcaatcttggccgtgcaaccatcgattcttgctgcaaacaacaccaaaaaaataataataatcagaaaattcatacattacactcacatccacccaaaaaggaacaaattaatcatcacaaaaccatgcaaccaacccttgctccaacaaatctaggacaccacgagaaaggcaaagatacctaaacagaaggattcttttgcttatctagggagtactataaaaaaaacccatccaTttttttcactgttcaagttcagaaatgtaaagAacagcaacctgacagaagaatggtacaccaatcaaaacacccctctctctttctctctctctctctcttcactgttccattaccctatccacttccttatctGggctactggtctaccacttcttccaactcaacgagaagccacataaaaagggaagtaagaCgagagagAgacaaattaatcagcaacctctcttcaggcagcgagcgagtgatcgatcgAttcagattcagGCAgcagacagcagagtactcaggtcactagctaggcagataggcttggatcgataccaatccaatcagtcaggtggcgccGgggagacgagggaagaggaagaggaaGAGgaggaagcaagtaggcgacagaaagaatggcgggcgtagcagcagcggcggcaggtgaggatAatgcaatccgcgagcccgtgagcgatcgagcgactcacggtcgtctcgccgggattctgtggccgcggcgcggccacctcgccccccggccggtgacggcat
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| CDS seq | atgcgcctagcggaagcagcggcgccCCACCAGCAGCAGGCGTGGCGTCCGGTGGCGCCGGCGACGGCGGGGCGCGACAGCGGCGGCACGGGGAGCGGCAAGTCGTCGGTGGACGGCGGCGTCGGGCGCGCGTCGCACGACTCCCTGCCGCGGGTGTCGCAGGAGCTCAAGGACGCGCTGTCGAGCCTGCAGCAGACGTTCGTGGTGTCCGACGCGACGCGCCCGGACTGCCCCATCATCTACGCCAGCGAGGGGTTCTTCACCATGACCGGCTACTCCCCCAGGGAGGTGGTCGGCCGCAACTGCCGCTTCCTCCAGGGCCCCGACACCGACGCCGCCGAGGTGGCCAAGATCCGCGACGCCGTCAAGCACGGCCGCAGCTTCTGCGGCCGCCTGCTCAACTACCGCAAGGACGGCGCCCCGTTCTGGAACCTCCTCACCGTCACCCCCATCCGCGACGACAACGGCAAGGTCATCAAGTTCATCGGgatgcaggtggaggtgagcaagtacacggaggggctcagcgacaagcggatgcggccgaacgagttgccggtgtcgctcatccgctacgacgAGAGGCAGAAGGACAAGGCGATGTCGTCGATGACGGAGGTGGTGCAGACGGTGAAGCAGCCGCGCGGGGCGCGCGCGCCGGCCGACGCGGCGCTGCTGACGCCGCCCAAGATGAGCGACGCGGACAAGATGGCCGCCATGTCGCCGGTCGTGGCACCCGGCACTCCCTCGGGCGGAGGAGGAGGAGCCGGGTCCTTCAAGTCGCCGCTCTGGGACCTGAAGAAGGAGGAGTCCCGCCTGAGCCGGCTCGCCAGCGGCCGCAAGTCCGGCCGCTCCTCCCTCATGGGGTTCAAGATCGGGAAGAGGAGCTCGGTGGGGAGCAGGGAGGCGCCGGCGGTGGTGGAGGAGCCGGCGCCGGCGCCACCGCCGGCGCCGGAGGTGGTGGAGAGGACGGACAGCTGGGAGCGGGCGGAGCGGGAGAAGGACATCCGGCAGGGGATCGACCTGGCCACCACGCTGGAGCGCATCGAGAAGAACTTCGTCATCACCGACCCCAGGATCCCGGACAACCCCATCATCTTCGCGTCGGATAGCTTCCTGGAGCTGACGGAttgcggtcttgctgattgtggcagattccttcaagggccggagaccgaccagggcacggtggacaagatcagggaggccatcagggagcagaaggagatcacggtccagctaatcaactacaccaagagcgggaagaagttctggaacttgttccaccttcaacccatgcgcgaccagaagggggagcttcaatacttcattggtgtgcaacttgatggaagtgatcatgttgaacccctcaggaaccgcctttcagagaatactgagatacagagtgccaaattgagaccagaggatttgtgggcaattcactcaatgcgtgtttctccaaaacctcacaaacggaataacccttcttggatagctatagaaaaggctacaaatttaggggagaagattggcttgaaacacttcaagcctgtaaaacctctcggctgtggtgacactggcagtgtgcacttggttgagctacaaggaagtggtgaattatttgcaatgaaggccatggacaagtcagtgatgttgaaccgcaacaaggtacatcgagcttgtattgaaagagaaatatacgcactattggatcatccatttctcccaacattgtatacttcatttcagacgccaacacatgtttgtctcataacagacttttgtccgggaggagaactctttgcagtgcttgataggcaacccatgaaaattttcagggaagaatgtgcaaggttttatgctgcagaggttgtaattggtctcgagtaccttcattgcctaggtattatataccgtgatctgaagccagaaaacattttgctccaagcagatgggcacattgtactgactgattttgatctttcatttttgacgacttcaaaaccccacgtgataaaaaattccacatcattaaaacgaagaaggtcacaagaatttcTCcccccaacatttgtctcagaaccttccactccatcaaattcatttgttggtactgaagagtatatcgctccagaggttataacgggtgcagggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatgggcgtacacctttccgaggaaagaacaggaaaaagacattttataacatactgcacaaagaccttacatttcccagtagcattccggttagtcttgcagcaaagcaattaatccatggattacttcagagagatccttcaaatcgtataggttcaaatgctggtgcaaatgacatcaagcaacattccttttttcaagacatcaattggccactcatacgttgcatgagcccccctgaactagatgttcctctgaaactaattggcaaggaaactcaaccaaaagcgaagcctgacgaagatgttcccctaaatcttgatacattttaa
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| Protein seq | MRLAEAAAPHQQQAWRPVAPATAGRDSGGTGSGKSSVDGGVGRASHDSLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVKQPRGARAPADAALLTPPKMSDADKMAAMSPVVAPGTPSGGGGGAGSFKSPLWDLKKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDSWERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTDCGLADCGRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSENTEIQSAKLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGELFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQADGHIVLTDFDLSFLTTSKPHVIKNSTSLKRRRSQEFLPPTFVSEPSTPSNSFVGTEEYIAPEVITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSPPELDVPLKLIGKETQPKAKPDEDVPLNLDTF |
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| Function | Phototropin-2 [UniProtKB/Swiss-Prot:Q9ST27] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007090 | OsLima_04g0007090.01 | Chr04 | 14278562 | 14291797 | - | NAM | ||
| CDS seq | atgccgtcaccggccggggggcgaggtggccgcgccgcggccacagaatcccggcgagacgaccgtgagtcgctcgatcgctcacgggctcgcggattgcatTatcctcacctgccgccgctgctgctacgcccgccattctttctgtcgcctacttgcttcctcCTCttcctcttcctcttccctccaagaatcgatggttgcacggccaagattgctacaccttcgctgataaatagccgaggacaatctcatcggcatccatggcgggcagcagcagctcgaaggagatag
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| Protein seq | MPSPAGGRGGRAAATESRRDDRESLDRSRARGLHYPHLPPLLLRPPFFLSPTCFLLFLFLFPPRIDGCTAKIATPSLINSRGQSHRHPWRAAAARRR |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007090 | OsLima_04g0007090.02 | Chr04 | 14278580 | 14291797 | - | NAM | ||
| CDS seq | atgccgtcaccggccggggggcgaggtggccgcgccgcggccacagaatcccggcgagacgaccgtgagtcgctcgatcgctcacgggctcgcggattgcatTatcctcacctgccgccgctgctgctacgcccgccattctttctgtcgcctacttgcttcctcCTCttcctcttcctcttccctccaagaatcgatggttgcacggccaagattgctacaccttcgctgataaatagccgaggacaatctcatcggcatccatggcgggcagcagcagctcgaaggagatag
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| Protein seq | MPSPAGGRGGRAAATESRRDDRESLDRSRARGLHYPHLPPLLLRPPFFLSPTCFLLFLFLFPPRIDGCTAKIATPSLINSRGQSHRHPWRAAAARRR |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007090 | OsLima_04g0007090.04 | Chr04 | 14278580 | 14291634 | - | NAM | ||
| CDS seq | atgcgcctagcggaagcagcggcgccCCACCAGCAGCAGGCGTGGCGTCCGGTGGCGCCGGCGACGGCGGGGCGCGACAGCGGCGGCACGGGGAGCGGCAAGTCGTCGGTGGACGGCGGCGTCGGGCGCGCGTCGCACGACTCCCTGCCGCGGGTGTCGCAGGAGCTCAAGGACGCGCTGTCGAGCCTGCAGCAGACGTTCGTGGTGTCCGACGCGACGCGCCCGGACTGCCCCATCATCTACGCCAGCGAGGGGTTCTTCACCATGACCGGCTACTCCCCCAGGGAGGTGGTCGGCCGCAACTGCCGCTTCCTCCAGGGCCCCGACACCGACGCCGCCGAGGTGGCCAAGATCCGCGACGCCGTCAAGCACGGCCGCAGCTTCTGCGGCCGCCTGCTCAACTACCGCAAGGACGGCGCCCCGTTCTGGAACCTCCTCACCGTCACCCCCATCCGCGACGACAACGGCAAGGTCATCAAGTTCATCGGgatgcaggtggaggtgagcaagtacacggaggggctcagcgacaagcggatgcggccgaacgagttgccggtgtcgctcatccgctacgacgAGAGGCAGAAGGACAAGGCGATGTCGTCGATGACGGAGGTGGTGCAGACGGTGAAGCAGCCGCGCGGGGCGCGCGCGCCGGCCGACGCGGCGCTGCTGACGCCGCCCAAGATGAGCGACGCGGACAAGATGGCCGCCATGTCGCCGGTCGTGGCACCCGGCACTCCCTCGGGCGGAGGAGGAGGAGCCGGGTCCTTCAAGTCGCCGCTCTGGGACCTGAAGAAGGAGGAGTCCCGCCTGAGCCGGCTCGCCAGCGGCCGCAAGTCCGGCCGCTCCTCCCTCATGGGGTTCAAGATCGGGAAGAGGAGCTCGGTGGGGAGCAGGGAGGCGCCGGCGGTGGTGGAGGAGCCGGCGCCGGCGCCACCGCCGGCGCCGGAGGTGGTGGAGAGGACGGACAGCTGGGAGCGGGCGGAGCGGGAGAAGGACATCCGGCAGGGGATCGACCTGGCCACCACGCTGGAGCGCATCGAGAAGAACTTCGTCATCACCGACCCCAGGATCCCGGACAACCCCATCATCTTCGCGTCGGATAGCTTCCTGGAGCTGACGGAttgcggtcttgctgattgtggcagattccttcaagggccggagaccgaccagggcacggtggacaagatcagggaggccatcagggagcagaaggagatcacggtccagctaatcaactacaccaagagcgggaagaagttctggaacttgttccaccttcaacccatgcgcgaccagaagggggagcttcaatacttcattggtgtgcaacttgatggaagtgatcatgttgaacccctcaggaaccgcctttcagagaatactgagatacagagtgccaaattgagaccagaggatttgtgggcaattcactcaatgcgtgtttctccaaaacctcacaaacggaataacccttcttggatagctatagaaaaggctacaaatttaggggagaagattggcttgaaacacttcaagcctgtaaaacctctcggctgtggtgacactggcagtgtgcacttggttgagctacaaggaagtggtgaattatttgcaatgaaggccatggacaagtcagtgatgttgaaccgcaacaaggtacatcgagcttgtattgaaagagaaatatacgcactattggatcatccatttctcccaacattgtatacttcatttcagacgccaacacatgtttgtctcataacagacttttgtccgggaggagaactctttgcagtgcttgataggcaacccatgaaaattttcagggaagaatgtgcaaggttttatgctgcagaggttgtaattggtctcgagtaccttcattgcctaggtattatataccgtgatctgaagccagaaaacattttgctccaagcagatgggcacattgtactgactgattttgatctttcatttttgacgacttcaaaaccccacgaggttataacgggtgcagggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatgggcgtacacctttccgaggaaagaacaggaaaaagacattttataacatactgcacaaagaccttacatttcccagtagcattccggttagtcttgcagcaaagcaattaatccatggattacttcagagagatccttcaaatcgtataggttcaaatgctggtgcaaatgacatcaagcaacattccttttttcaagacatcaattggccactcatacgttgcatgagcccccctgaactagatgttcctctgaaactaattggcaaggaaactcaaccaaaagcgaagcctgacgaagatgttcccctaaatcttgatacattttaa
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| Protein seq | MRLAEAAAPHQQQAWRPVAPATAGRDSGGTGSGKSSVDGGVGRASHDSLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVKQPRGARAPADAALLTPPKMSDADKMAAMSPVVAPGTPSGGGGGAGSFKSPLWDLKKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDSWERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTDCGLADCGRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSENTEIQSAKLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGELFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQADGHIVLTDFDLSFLTTSKPHEVITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSPPELDVPLKLIGKETQPKAKPDEDVPLNLDTF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007090 | OsLima_04g0007090.05 | Chr04 | 14278522 | 14291434 | - | NAM | ||
| CDS seq | atgcgcctagcggaagcagcggcgccCCACCAGCAGCAGGCGTGGCGTCCGGTGGCGCCGGCGACGGCGGGGCGCGACAGCGGCGGCACGGGGAGCGGCAAGTCGTCGGTGGACGGCGGCGTCGGGCGCGCGTCGCACGACTCCCTGCCGCGGGTGTCGCAGGAGCTCAAGGACGCGCTGTCGAGCCTGCAGCAGACGTTCGTGGTGTCCGACGCGACGCGCCCGGACTGCCCCATCATCTACGCCAGCGAGGGGTTCTTCACCATGACCGGCTACTCCCCCAGGGAGGTGGTCGGCCGCAACTGCCGCTTCCTCCAGGGCCCCGACACCGACGCCGCCGAGGTGGCCAAGATCCGCGACGCCGTCAAGCACGGCCGCAGCTTCTGCGGCCGCCTGCTCAACTACCGCAAGGACGGCGCCCCGTTCTGGAACCTCCTCACCGTCACCCCCATCCGCGACGACAACGGCAAGGTCATCAAGTTCATCGGgatgcaggtggaggtgagcaagtacacggaggggctcagcgacaagcggatgcggccgaacgagttgccggtgtcgctcatccgctacgacgAGAGGCAGAAGGACAAGGCGATGTCGTCGATGACGGAGGTGGTGCAGACGGTGAAGCAGCCGCGCGGGGCGCGCGCGCCGGCCGACGCGGCGCTGCTGACGCCGCCCAAGATGAGCGACGCGGACAAGATGGCCGCCATGTCGCCGGTCGTGGCACCCGGCACTCCCTCGGGCGGAGGAGGAGGAGCCGGGTCCTTCAAGTCGCCGCTCTGGGACCTGAAGAAGGAGGAGTCCCGCCTGAGCCGGCTCGCCAGCGGCCGCAAGTCCGGCCGCTCCTCCCTCATGGGGTTCAAGATCGGGAAGAGGAGCTCGGTGGGGAGCAGGGAGGCGCCGGCGGTGGTGGAGGAGCCGGCGCCGGCGCCACCGCCGGCGCCGGAGGTGGTGGAGAGGACGGACAGCTGGGAGCGGGCGGAGCGGGAGAAGGACATCCGGCAGGGGATCGACCTGGCCACCACGCTGGAGCGCATCGAGAAGAACTTCGTCATCACCGACCCCAGGATCCCGGACAACCCCATCATCTTCGCGTCGGATAGCTTCCTGGAGCTGACGGAttgcggtcttgctgattgtggcagattccttcaagggccggagaccgaccagggcacggtggacaagatcagggaggccatcagggagcagaaggagatcacggtccagctaatcaactacaccaagagcgggaagaagttctggaacttgttccaccttcaacccatgcgcgaccagaagggggagcttcaatacttcattggtgtgcaacttgatggaagtgatcatgttgaacccctcaggaaccgcctttcagagaatactgagatacagagtgccaaattgagaccagaggatttgtgggcaattcactcaatgcgtgtttctccaaaacctcacaaacggaataacccttcttggatagctatagaaaaggctacaaatttaggggagaagattggcttgaaacacttcaagcctgtaaaacctctcggctgtggtgacactggcagtgtgcacttggttgagctacaaggaagtggtgaattatttgcaatgaaggccatggacaagtcagtgatgttgaaccgcaacaaggtacatcgagcttgtattgaaagagaaatatacgcactattggatcatccatttctcccaacattgtatacttcatttcagacgccaacacatgtttgtctcataacagacttttgtccgggaggagaactctttgcagtgcttgataggcaacccatgaaaattttcagggaagaatgtgcaaggttttatgctgcagaggttgtaattggtctcgagtaccttcattgcctaggtattatataccgtgatctgaagccagaaaacattttgctccaagcagatgggcacattgtactgactgattttgatctttcatttttgacgacttcaaaaccccacgtgataaaaaattccacatcattaaaacgaagaaggtcacaagaatttcTCcccccaacatttgtctcagaaccttccactccatcaaattcatttgttggtactgaagagtatatcgctccagaggttataacgggtgcagggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatgggcgtacacctttccgaggaaagaacaggaaaaagacattttataacatactgcacaaagaccttacatttcccagtagcattccggttagtcttgcagcaaagcaattaatccatggattacttcagagagatccttcaaatcgtataggttcaaatgctggtgcaaatgacatcaagcaacattccttttttcaagacatcaattggccactcatacgttgcatgagcccccctgaactagatgttcctctgaaactaattggcaaggaaactcaaccaaaagcgaagcctgacgaagatgttcccctaaatcttgatacattttaa
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| Protein seq | MRLAEAAAPHQQQAWRPVAPATAGRDSGGTGSGKSSVDGGVGRASHDSLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVKQPRGARAPADAALLTPPKMSDADKMAAMSPVVAPGTPSGGGGGAGSFKSPLWDLKKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDSWERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTDCGLADCGRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSENTEIQSAKLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGELFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQADGHIVLTDFDLSFLTTSKPHVIKNSTSLKRRRSQEFLPPTFVSEPSTPSNSFVGTEEYIAPEVITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSPPELDVPLKLIGKETQPKAKPDEDVPLNLDTF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007090 | OsLima_04g0007090.03 | Chr04 | 14278522 | 14291788 | - | NAM | ||
| CDS seq | atgcgcctagcggaagcagcggcgccCCACCAGCAGCAGGCGTGGCGTCCGGTGGCGCCGGCGACGGCGGGGCGCGACAGCGGCGGCACGGGGAGCGGCAAGTCGTCGGTGGACGGCGGCGTCGGGCGCGCGTCGCACGACTCCCTGCCGCGGGTGTCGCAGGAGCTCAAGGACGCGCTGTCGAGCCTGCAGCAGACGTTCGTGGTGTCCGACGCGACGCGCCCGGACTGCCCCATCATCTACGCCAGCGAGGGGTTCTTCACCATGACCGGCTACTCCCCCAGGGAGGTGGTCGGCCGCAACTGCCGCTTCCTCCAGGGCCCCGACACCGACGCCGCCGAGGTGGCCAAGATCCGCGACGCCGTCAAGCACGGCCGCAGCTTCTGCGGCCGCCTGCTCAACTACCGCAAGGACGGCGCCCCGTTCTGGAACCTCCTCACCGTCACCCCCATCCGCGACGACAACGGCAAGGTCATCAAGTTCATCGGgatgcaggtggaggtgagcaagtacacggaggggctcagcgacaagcggatgcggccgaacgagttgccggtgtcgctcatccgctacgacgAGAGGCAGAAGGACAAGGCGATGTCGTCGATGACGGAGGTGGTGCAGACGGTGAAGCAGCCGCGCGGGGCGCGCGCGCCGGCCGACGCGGCGCTGCTGACGCCGCCCAAGATGAGCGACGCGGACAAGATGGCCGCCATGTCGCCGGTCGTGGCACCCGGCACTCCCTCGGGCGGAGGAGGAGGAGCCGGGTCCTTCAAGTCGCCGCTCTGGGACCTGAAGAAGGAGGAGTCCCGCCTGAGCCGGCTCGCCAGCGGCCGCAAGTCCGGCCGCTCCTCCCTCATGGGGTTCAAGATCGGGAAGAGGAGCTCGGTGGGGAGCAGGGAGGCGCCGGCGGTGGTGGAGGAGCCGGCGCCGGCGCCACCGCCGGCGCCGGAGGTGGTGGAGAGGACGGACAGCTGGGAGCGGGCGGAGCGGGAGAAGGACATCCGGCAGGGGATCGACCTGGCCACCACGCTGGAGCGCATCGAGAAGAACTTCGTCATCACCGACCCCAGGATCCCGGACAACCCCATCATCTTCGCGTCGGATAGCTTCCTGGAGCTGACGGAttgcggtcttgctgattgtggcagattccttcaagggccggagaccgaccagggcacggtggacaagatcagggaggccatcagggagcagaaggagatcacggtccagctaatcaactacaccaagagcgggaagaagttctggaacttgttccaccttcaacccatgcgcgaccagaagggggagcttcaatacttcattggtgtgcaacttgatggaagtgatcatgttgaacccctcaggaaccgcctttcagagaatactgagatacagagtgccaaattgagaccagaggatttgtgggcaattcactcaatgcgtgtttctccaaaacctcacaaacggaataacccttcttggatagctatagaaaaggctacaaatttaggggagaagattggcttgaaacacttcaagcctgtaaaacctctcggctgtggtgacactggcagtgtgcacttggttgagctacaaggaagtggtgaattatttgcaatgaaggccatggacaagtcagtgatgttgaaccgcaacaaggtacatcgagcttgtattgaaagagaaatatacgcactattggatcatccatttctcccaacattgtatacttcatttcagacgccaacacatgtttgtctcataacagacttttgtccgggaggagaactctttgcagtgcttgataggcaacccatgaaaattttcagggaagaatgtgcaaggttttatgctgcagaggttgtaattggtctcgagtaccttcattgcctaggtattatataccgtgatctgaagccagaaaacattttgctccaagcagatgggcacattgtactgactgattttgatctttcatttttgacgacttcaaaaccccacgtgataaaaaattccacatcattaaaacgaagaaggtcacaagaatttcTCcccccaacatttgtctcagaaccttccactccatcaaattcatttgttggtactgaagagtatatcgctccagaggttataacgggtgcagggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatgggcgtacacctttccgaggaaagaacaggaaaaagacattttataacatactgcacaaagaccttacatttcccagtagcattccggttagtcttgcagcaaagcaattaatccatggattacttcagagagatccttcaaatcgtataggttcaaatgctggtgcaaatgacatcaagcaacattccttttttcaagacatcaattggccactcatacgttgcatgagcccccctgaactagatgttcctctgaaactaattggcaaggaaactcaaccaaaagcgaagcctgacgaagatgttcccctaaatcttgatacattttaa
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| Protein seq | MRLAEAAAPHQQQAWRPVAPATAGRDSGGTGSGKSSVDGGVGRASHDSLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVKQPRGARAPADAALLTPPKMSDADKMAAMSPVVAPGTPSGGGGGAGSFKSPLWDLKKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDSWERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTDCGLADCGRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSENTEIQSAKLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGELFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQADGHIVLTDFDLSFLTTSKPHVIKNSTSLKRRRSQEFLPPTFVSEPSTPSNSFVGTEEYIAPEVITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSPPELDVPLKLIGKETQPKAKPDEDVPLNLDTF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007090 | OsLima_04g0007090.06 | Chr04 | 14278564 | 14291404 | - | IsoSeq | ||
| CDS seq | atggaagtgatcatgttgaacccctcaggaaccgcctttcagagaatactgagatacagagtgccaaattggtcaaagctacagcagagaatgtggatgatgcagtcagggagcttcctgatgccaact |
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| Protein seq | MEVIMLNPSGTAFQRILRYRVPNWSKLQQRMWMMQSGSFLMPT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 14278809 | 14279223 | - | OsLima_04g0007090.05,OsLima_04g0007090.03,OsLima_04g0007090.01,OsLima_04g0007090.06 | OsLima_04g0007090.05,OsLima_04g0007090.02,OsLima_04g0007090.06,OsLima_04g0007090.01,OsLima_04g0007090.03,OsLima_04g0007090.04 | All |
| SE | Chr04 | 14280859 | 14281540 | - | OsLima_04g0007090.05,OsLima_04g0007090.03,OsLima_04g0007090.01,OsLima_04g0007090.06,OsLima_04g0007090.02 | OsLima_04g0007090.05,OsLima_04g0007090.02,OsLima_04g0007090.06,OsLima_04g0007090.01,OsLima_04g0007090.03,OsLima_04g0007090.04 | All |
| SE | Chr04 | 14285234 | 14286326 | - | OsLima_04g0007090.06 | OsLima_04g0007090.06,OsLima_04g0007090.03,OsLima_04g0007090.04,OsLima_04g0007090.05 | All |
| A5 | Chr04 | 14291047 | 14291611 | - | OsLima_04g0007090.03,OsLima_04g0007090.04 | OsLima_04g0007090.04,OsLima_04g0007090.01,OsLima_04g0007090.02,OsLima_04g0007090.03 | All |
| A5 | Chr04 | 14285234 | 14286326 | - | OsLima_04g0007090.01,OsLima_04g0007090.02 | OsLima_04g0007090.05,OsLima_04g0007090.02,OsLima_04g0007090.01,OsLima_04g0007090.03,OsLima_04g0007090.04 | All |
| A5 | Chr04 | 14286862 | 14289338 | - | OsLima_04g0007090.01,OsLima_04g0007090.02 | OsLima_04g0007090.05,OsLima_04g0007090.02,OsLima_04g0007090.01,OsLima_04g0007090.03,OsLima_04g0007090.04 | All |
| AF | Chr04 | 14291047 | 14291788 | - | OsLima_04g0007090.05 | OsLima_04g0007090.05,OsLima_04g0007090.03 | All |
| AF | Chr04 | 14291047 | 14291797 | - | OsLima_04g0007090.05 | OsLima_04g0007090.05,OsLima_04g0007090.01,OsLima_04g0007090.02 | All |
| AF | Chr04 | 14291047 | 14291634 | - | OsLima_04g0007090.05 | OsLima_04g0007090.05,OsLima_04g0007090.04 | All |
| AF | Chr04 | 14291047 | 14291788 | - | OsLima_04g0007090.06 | OsLima_04g0007090.06,OsLima_04g0007090.03 | All |
| AF | Chr04 | 14291047 | 14291797 | - | OsLima_04g0007090.06 | OsLima_04g0007090.06,OsLima_04g0007090.01,OsLima_04g0007090.02 | All |
| AF | Chr04 | 14291047 | 14291634 | - | OsLima_04g0007090.06 | OsLima_04g0007090.06,OsLima_04g0007090.04 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.404476 | 0.167625 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0304200 | RBH | 20.879183 | 21.740173 | 7.258967 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g23890 | RBH | 13.558038 | 13.749624 | 1.823807 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0304200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0007250 | RBH | 6.042629 | 4.488972 | 7.899733 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0007890 | RBH | 6.063578 | 1.489762 | 3.316715 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0007640 | RBH | 10.935794 | 4.742087 | 16.469412 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0007350 | RBH | 2.143771 | 0.010688 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007540 | RBH | 90.456940 | 3.412883 | 41.272831 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0223600 | RBH | 44.1416055 | 8.728759 | 0.4735455 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0007290 | RBH | 3.232400 | 0.284206 | 3.797371 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0221600 | RBH | 57.9445935 | 2.959342 | 2.307673 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007330 | RBH | 10.257863 | 4.888870 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007420 | RBH | 76.132271 | 8.358955 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0007260 | RBH | 7.449994 | 0.289924 | 4.056479 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007620 | RBH | 5.292729 | 0.692990 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G007300 | RBH | 6.221266 | 0.000000 | 8.142869 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0007410 | RBH | 19.885719 | 4.130663 | 11.850140 |
